Glutamicibacter halophytocola: AOZ07_13650
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Entry
AOZ07_13650 CDS
T04229
Name
(GenBank) hypothetical protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
gar
Glutamicibacter halophytocola
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gar03019
]
AOZ07_13650
Enzymes [BR:
gar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AOZ07_13650
Messenger RNA biogenesis [BR:
gar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AOZ07_13650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
HA2_N
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALG29920
LinkDB
All DBs
Position
complement(2949487..2951835)
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AA seq
782 aa
AA seq
DB search
MAARAAARRLAHLDGSVLGEHVGFAVRGERKSSATTQVEFVTAGLMLRRLLADPDLSGVS
AVVIDEVHERSIDTDLLLAMVKQVNELRDDLCLVLMSATLHAQELADFLSTEKPARVFSA
QTAQFDVEEIFESYSSTRVTEFGIKDDYLRHVAAVSVQHSARANGASKHPVDTLVFVPGV
REVERVCAQISANGVTALALHSQISSAEQDAILNEPEAGSSPRIIVSTSIAESSLTVPRV
HLVVDAGYAREPRRDTSRGMSGLVTVVASRATATQRAGRAGRLGPGQVVRTLDPKSFAAA
PAYSTPEIRTGDLVSAGLALAAWGTPRGEGLELWEVPPAAAMGSDELVLKSLGAVDNSGR
ITSMGEQMVKIPTDPRAARALLEGAPLFGSLPAAEAVALLASSERIASADLQELLVSIRR
ASHSGHRAWKHEAARMQRLAEVKARGKQGQPAPATASSAEALSAISALAYPQWVARKVGH
DEYLLASGTRAVLPRGSHLAHEEYLAVVEVARTGTRATIRRATGIELSTVLELLPQMRES
KETAEFIDGKISARKVERFRAIELSARPIKATEELGMQAVQFAVQEQGLAFFGEQEGFDA
LRRRMAVAYRLLGEPFCAVDDESLIARADEWLQPILRQIAHGKNAAKADVHSALRTLLPW
EHAHDFDSLVPQRLEVPSGSKIRISYPPVGESGPAVVAVKLQECFGLDQSPRLVHEKLPV
QFHLLSPGGHPLAVTEDIASFFNGPYAQVRSEMRGRYPKHPWPENPWGHVATAKTKNRLN
GQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcccgcgccgctgcccgaaggcttgcccacttggatgggtcagtgctcggcgag
cacgtcggttttgcggttcgcggagaacgcaagagttccgcaactacccaggtggaattt
gtcaccgcgggtttgatgctgcgccgtttgctggccgatccggatttgtctggggtcagc
gccgtcgtcattgatgaagttcacgaacggtccatcgacaccgatctgctgctggcaatg
gtcaagcaagtcaatgaacttcgagatgatctctgccttgtcctgatgagcgcgacgctg
cacgcccaggaacttgccgatttcctttcgactgaaaaaccagcgagggtgttcagcgcc
caaaccgcgcagttcgatgtcgaggagattttcgagagctactcatcaaccagagtcact
gaattcggtatcaaagatgactacttgcggcatgtcgcggccgttagcgtacagcattcg
gcgagagccaatggtgccagcaagcatccggtggacaccttggtgtttgtgccgggcgtg
cgtgaagtcgagcgcgtctgcgcccagatttcagccaatggtgtcaccgcattggcactg
cattcgcaaatctcgtcggccgagcaagacgcgattttgaatgaacctgaggcaggcagc
tcgccgcgaattattgtttcaacttccattgccgaatcctcgctgacagtacctcgggtc
cacctcgtggtcgacgctggctacgccagggaaccgcgtcgggatacgtcccgcggaatg
tccgggcttgtcaccgtcgtagcaagtcgggccacagccacccagcgtgctggccgtgct
ggccgattgggacccggccaagtcgtgcgcacccttgaccccaagtcatttgccgcggca
ccagcctattccaccccggaaatccgcaccggtgatctggtttcggctggtcttgccctg
gcagcgtggggaacgccccgcggagagggcctggagctgtgggaggttccccctgccgcg
gccatgggcagcgacgagctggtgctcaaaagccttggcgctgttgacaattcgggacgc
attacctcgatgggcgagcaaatggtcaagatccccaccgatcccagggcagcgcgagcc
ttgctggagggcgcgcccttgttcggctcgctgccggcggccgaagcagtggcattgctg
gccagctccgagcgcatcgccagcgcagatctgcaagaactgctggtctcgattcgaagg
gcatcccattcgggccacagagcctggaaacatgaagcagcgcgcatgcaacggctggca
gaggtgaaggctcgcggcaagcaaggacaacctgcgccagccactgcttcgtcggccgag
gcattatcagccatcagcgcactggcctacccgcaatgggttgcccgcaaagttgggcac
gatgagtacctgctcgcttctggaacaagggctgttcttcctcgggggagccacttggca
catgaggagtatttggccgtggtcgaagtggcgcggaccgggaccagggcaacgatcagg
cgagcgacgggtatcgagctgtctacggtccttgaattgcttccgcaaatgcgcgagagc
aaggaaacagccgaattcatcgacggcaaaatcagtgctcgcaaggtagaacgattccgc
gccattgaactttccgcgcgtcccatcaaagcaaccgaggaattgggaatgcaggcggtc
cagttcgctgtgcaagagcaggggctggcgtttttcggtgagcaggagggttttgatgcc
ctgcgccgccgcatggcagtggcctaccggttgcttggcgaaccgttctgcgcggttgat
gatgagtccctgatagcgcgggccgatgaatggctgcaacctatcctgcgccagatagct
catggcaagaacgctgccaaagccgatgtgcattcggccttgcgtaccctgcttccgtgg
gagcatgcgcacgattttgattcgttggtgccgcaacgcctggaagtgccctcagggtcc
aagatccgcatctcctatccacctgtgggcgagagcggtccggctgtggtggccgtcaag
cttcaagagtgttttggcctggaccaatctccgcggctggtgcacgagaagctgccggtg
cagttccacctgctgtccccagggggccacccgctggcagttaccgaagacattgccagc
ttcttcaatggcccttacgctcaagttcgttctgaaatgcgtggacgctatccgaagcat
ccctggccggaaaatccttggggacatgttgccacggcgaaaacgaagaatcggctcaac
gggcaatag
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