Gracilinanus agilis (agile gracile opossum): 123230703
Help
Entry
123230703 CDS
T07702
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas05014
Amyotrophic lateral sclerosis
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123230703 (ATXN2L)
05017 Spinocerebellar ataxia
123230703 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
123230703 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123230703 (ATXN2L)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123230703 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
123230703
NCBI-ProteinID:
XP_044512786
LinkDB
All DBs
Position
1:complement(132804282..132815257)
Genome browser
AA seq
1071 aa
AA seq
DB search
MLKPQPPQPSQPQQTPIQQPAPARRPPGGTSPPNGSLGGTPASASAPGPPTAASPGLGPP
PAGGSGIRRGGEGVLPPQPPTHQHQERPGGAATGSTRGQSTGKGPPPSPVFEGVYNNSRM
LHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKAPEPASGPRREDIVDTM
VFKPSDVMMVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDGNSDDYDL
ESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREI
ESSPQYRLRIAMENDDGRTEEEKHSSVQRQGSGRDSPSLVSRDGKYIPLPQRMREGGPRG
GVRCSGSRGGRPGIGSLPPRGGPHHPDSSGPSPGPEPRGINGGPSRMSPKAQRPLRGAKT
MSSPSSRPPGETSAPPPTGISLFLVVGRMYPPRSPKSAAPAPASASCPEPPMGSAVPTST
ASIPPVSSSMEPGAGPISPTSPKVTASNDGKELPQKEPGRTLEPPELARIAGKAPGLQNE
QKRYQLEELKKFGAQFKLQSSSSPEASLDPFSSRGPKEGGVEAKGKEKEVESLLASEPLV
SSGSSKTESLPDKEEKLSLPTTGGAEGPEQSQTPRQNQMGSPPGVLSKGDDKEEGPVTDQ
VKKSTLNPNAKEFNPSKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGMYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPIMQAAAA
AGPPLVAATPYSSYISYNPQQFPGQPTMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPPAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQPPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGGVPQSGVPA
LSASTPSPYTYIGHHQGEQTGHGYLPFQEGRENLIIQSHPSQQLPFHPPGN
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccgcagccgcctcagccatctcagccccagcagacacccatccagcaaccg
gcaccagcacgccggcctcccggggggaccagcccccccaacggaagcctcggggggact
ccagcctctgcctcggctccggggccgcccactgctgcttccccgggcctagggcctcct
cctgctggaggcagtgggatccgccggggaggtgagggggttctgccgccacagccgcca
acacatcagcatcaggagcggcccgggggcgctgctactggcagtaccaggggacagagt
acaggaaaggggcctccaccatcacctgtatttgagggtgtctataataattctaggatg
cttcacttccttactgctgttgtgggctccacttgtgatgtaaaggtgaaaaatggtacc
acatatgaaggtattttcaagactctaagttcaaagtttgagctagcagtggatgcagtt
cataggaaggctcctgagccagccagtggtccccgtcgagaggacatcgtggataccatg
gtgtttaagccaagtgatgtgatgatggtccacttccgaaatgttgacttcaattatgcc
actaaggacaagttcacagactctgccattgccatgaactcaaaggtaaatggtgaacac
aaggagaaggtgctacagcgatgggagggaggtgatggcaacagtgatgactatgacctt
gaatctgatatgtctaatggatgggaccctaatgaaatgttcaagttcaatgaggaaaac
tatggagttaaaacaacttatgacagtagcctctcttcttatacagtccccttggagaag
gacaactcggaggaatttcgtcagcgggagctccgtgcagcccaactggccagagaaata
gagtccagtccccagtaccgcttacgtattgctatggagaatgatgatggacggacagag
gaagagaagcatagctcggtgcagcgacagggctcaggccgtgacagtcccagtttagtg
tccagggatggaaaatatattcctttgcctcagaggatgcgggagggaggccctagagga
ggagttcgatgcagtggctccaggggtggtcgacctggcattggttccttgccccctcgg
ggtggcccccaccaccctgacagcagtggccccagtcctggtcctgaaccccgtggcatc
aatggaggtccttcccgcatgtcccccaaagcccagaggccccttagaggtgcaaagact
atgtcttcccctagcagccgcccccctggagaaacttccgcaccgcctcctacaggtatc
tccctatttcttgtagttggtcgaatgtacccacctcgttcccctaagtcagctgctcct
gccccagcctcagcttcctgtcctgagccacctatgggctctgcagttcccacctctaca
gcttccattcctccagtttcatcctctatggaacctggagctggccccatttccccaact
tccccaaaggttacagcttctaatgatgggaaagaattaccccaaaaggaacctgggaga
actctggagccaccagaacttgcccgaatagctgggaaagcccctggccttcagaatgaa
caaaaacgttaccagttggaagaactgaagaagtttggggctcagtttaagctccagtcc
agcagttctcctgaggccagtctggaccctttctcctctcggggccccaaggagggtgga
gtggaagccaaaggaaaggaaaaggaggtggaaagcctgctggcttcagagcccttggtg
tcctctggctcctccaaaacagaatctctacctgataaggaggaaaagctgtccctccct
acaacaggaggggctgaggggccagaacaatcccaaacacctcggcagaaccaaatgggc
agtcctcctggggtcctaagcaagggggatgacaaggaagagggacctgtcactgatcaa
gtgaagaagtctacattgaaccccaatgccaaggagttcaacccttcaaagcctctgttg
tctgtgaacaagtcaaccagcaccccaacttccccaggtccccggactcattcaactcct
tcaatcccagtgctgacagcaggccagagtgggatgtatagcccccagtacatctcctat
atacctcagattcatatggggccagccgtgcaggctcctcagatgtacccataccctgta
tctaactctgtgcctggtcagcagggcaagtaccggggagctaaaggttccttgccccct
caacgctcagaccagcaccaaccagcctcagcaccccctattatgcaggccgcagcagct
gcagggccccctttggtggcagctacaccatactcttcctatatctcctataatccccag
caattcccaggccagcctaccatgatgcagcccatggcccactatccctcacagcctgtc
tttgccccaatgcttcagagtaacccgaggatgctgacgtcaggcagccacccccaggcc
atcgtctcatcatctactcctcagtaccctccagcagagcagcccactccccaagcccta
tatgccaccgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccg
cagccagccaccacccctactgggagccagccgcagtcccagcatgcggcccccagccct
gtccagcatcaggcagggcagccaccacacttaggtagtgggcagccacaacagaattta
taccatccaggtgccttaacaggcacaccaccgtctctgccaccgggaccctctgcccag
tcccctcagagcagcttccctcagccagctgcagtctatgccatccatgcccaccagcag
ctgccacacggctttaccaatatggcccatgttacccaggcccatgtccagactggaatc
acggcagccccacccccccatcctggggctccccacccaccccaggtgatgctgctgcat
ccaccccagagccacgggggtccacctcaagggggtgtaccccagagtggcgtgcctgct
ctttctgcttccacaccttcaccctacacctacatcggacaccaccaaggtgagcagaca
ggccatggttatctgcctttccaggaagggagggaaaatctgattattcaatctcatccc
tcccagcagctccccttccaccccccggggaactga
DBGET
integrated database retrieval system
