Gracilinanus agilis (agile gracile opossum): 123231190
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Entry
123231190 CDS
T07702
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03430
Mismatch repair
gas03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123231190 (PMS2)
03460 Fanconi anemia pathway
123231190 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gas03400
]
123231190 (PMS2)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
123231190 (PMS2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
ExsD
Motif
Other DBs
NCBI-GeneID:
123231190
NCBI-ProteinID:
XP_044513377
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Position
1:complement(219779528..219817318)
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AA seq
867 aa
AA seq
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MEGPSTEIAKAIKPIDCKSIHRICSGQVVLNLSTAVKELLENSVDAGATNIDLKLKEYGA
DLIEVSDNGLGVEKENFEGLTLKHHTSKIQDFSDLTHVETFGFRGEALSSLCALSDVMIS
TCHKSATIGTRLVFDHNGKIVQKIPYPRPQGTTVSVQQLFSTLPVRYKEFQRNIKKEFTK
MVQVLQAYCIISTGIRINCTNQVGQGKRQTIIGTNGNSTVKENIGAVFGQKQLQSLIPFV
QLPPSESICEEFGINYNDALHNLFSISGFVSRSDHGVGRSTTERQFFFINQRPCDPAKIS
RLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKFLLAVLKTSLIGMF
DSGVNKLTVNQKPLLDSGGNLLKMYSTEMEKTLPEKKNLISLHTKGEEKRTLTISRLREA
FSLQHTTEQSFQSLKTHKPQDSPRQRNPWSFCSTSSPVNASKPISGKDCRSQEMVEPTPC
IHSSMSPKPVNTDKDSGHSSTFTQSNEGSSTLEKGAHVGRECVTSSPREDYTFSKENVET
FKKLPGPDSQFSISKSCLEEKNIENVFINLSPPSTSSPSKEKRFKKEVSSLNFSVPPKVM
NAEELSASQVDIAIKVTKKEVLLDFSMISLTKRLQQLQQQEKQRVKAQNYRRFRAKISPG
ENQAAEDELRKEISKDMFAEMEIIGQFNLGFIITKLNADLFIIDQHATDEKYNFEMLQLH
TVLQGQRLIIPQALNLTAVNEAILIENLEIFRKNGFDFIIDELAPVTERVKLISLPTSKN
WTFGPQDIDEMIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNKNEMKKLITHMG
EIEHPWNCPHGRPTMRHIASLNMISQD
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccgagtacagaaattgctaaagccatcaaacctatagattgtaagtctatc
catcggatttgctcaggacaagtggtgctgaatctatctactgctgtgaaggagctacta
gaaaatagtgtggatgctggagccactaatattgacttaaagcttaaagagtatggagct
gatcttattgaagtttcagacaatggtcttggagtagaaaaagaaaatttcgaaggcttg
actctgaaacatcatacttccaagatacaagatttctctgatctaacacatgttgaaaca
tttggctttcgaggagaggctctgagctcactttgtgcattgagtgatgttatgatctca
acttgtcataaatctgctacaattggaactcgactggtctttgatcacaatgggaaaatt
gttcaaaagattccttatccccgacctcaaggaacaactgtcagtgtacagcagttgttt
tctactcttcctgtgcgatataaagaatttcaacgcaatattaaaaaggagttcaccaaa
atggtacaggtattacaagcatactgtatcatttcaacaggtattcgaataaactgcacc
aatcaggtcggacaaggaaaacgacagactattataggcacaaatggaaattccacagta
aaggaaaatattggagctgtgtttggacaaaaacagttgcaaagcctcattccctttgtt
cagctgccccctagtgaatcaatttgtgaagagtttggcattaactataatgatgcacta
cataatctctttagtatttcaggttttgtttcccgttctgaccatggtgttggaaggagt
acaacagaaagacagtttttctttatcaatcaacggccttgtgaccctgcaaagatttcc
agactagtgaatgaagtctaccatttatataatcggcaccagtatccatttgttgtgctt
aacatttcagtcgattctgagtgcgtggatatcaatgtaaccccggacaaaaggcaaatt
ttattacaggaagaaaaatttttgttggctgtactaaaaacatctttgataggaatgttt
gatagtggtgttaacaaacttactgtcaaccagaagccactattggacagtggaggtaat
ttattaaagatgtattcaacagaaatggaaaaaacacttccagaaaagaagaatctcatc
tcactacatactaaaggagaagaaaaaagaacattaactatttccagactacgagaagca
ttttcccttcaacatacaacagaacagagttttcagagtctgaaaactcataaaccacag
gactctccaagacaaagaaatccttggtcattttgtagcacttcaagtcctgtaaacgct
tccaaaccaatttctggcaaagattgtcgcagtcaagagatggtggagccaactccatgc
atacatagcagtatgagtccaaagccagtaaacactgacaaagattcaggacacagtagc
acttttacacagtctaatgaaggttctagcactctggagaaaggtgcccatgttggcagg
gaatgtgttacaagttcacctagggaagattacacattttcaaaagaaaatgttgaaact
tttaagaaactaccaggacctgacagtcaattttcaatctcaaaaagttgtttggaagaa
aaaaatattgagaatgtcttcataaatttgtctcctccaagcactagctcaccatcaaaa
gagaagcgatttaaaaaggaagtgtcttctttaaatttcagtgttcccccaaaggtgatg
aatgctgaggaactttcagcttctcaggtggacatagccattaaagttactaaaaaagag
gtgcttcttgacttttctatgatttctttaaccaaaaggctgcaacagctacagcagcag
gaaaaacaaagggtaaaggcacagaattacagaagatttagggcaaaaataagccctgga
gaaaatcaagctgcagaagatgaactaagaaaagagataagtaaagatatgtttgcagaa
atggagatcattggtcaatttaacttgggatttataataaccaaactgaatgcagatctc
ttcattattgatcaacatgcgacagatgaaaaatacaactttgagatgttacaattgcac
actgttctgcaagggcaaaggcttataatacctcaggctctcaatttaactgctgtcaat
gaagccatactaatagaaaatctggaaatatttagaaagaatggttttgattttatcata
gatgaacttgctccagtcacagaaagggttaagttgatttccttgccaactagtaaaaat
tggacttttggaccacaagacatagacgagatgatcttcatgttaagtgattgtcctggt
gtcatgtgcagaccctctcgagtcaggcagatgtttgcctcaagggcatgtagaaaatct
gtcatgattggaactgcacttaacaagaatgaaatgaagaaactgatcactcatatgggt
gaaattgagcatccctggaattgcccccatggaaggccaactatgaggcacatagctagt
ttaaacatgatttctcaagattaa
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