Gracilinanus agilis (agile gracile opossum): 123231397
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Entry
123231397 CDS
T07702
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123231397
03036 Chromosome and associated proteins [BR:
gas03036
]
123231397
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123231397
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123231397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
123231397
NCBI-ProteinID:
XP_044513588
LinkDB
All DBs
Position
1:complement(315592942..315598117)
Genome browser
AA seq
1715 aa
AA seq
DB search
MSDFVESKAEESEEEYNDEGEVVPRVTKKFVEEEEDDEEEEEENLDDQDEQGNLKGFIND
DDDDEEEEEEDVGHKKRKRTAFDDLLEDDDFDLIEENLGIKVKRQKFRRVRKMSDDEDDD
EEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMTAPEEEEDEESDIDDFIVDDDGQPL
KKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIRV
RPKKTTKKQVSWRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLRSIPVKAAEDDEL
EEEADWIYRNAFASPTISLQESSDYLDRGQPVNSFSRKGPSTVQKIKEALGFIRNQHFEV
PFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKENLTRLFEKMQAYQYEQISADPD
KPLPDGIRALHTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRIR
EDGDEEEGEGEEVEDEQKGPELKQASRLDMYTICQSAGLDGLAKKFGLTPEQFGENLRDS
YQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQER
AKVNITPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKTCLAEEEGLLTIDISIDM
KGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKL
LAEAKEFVIKACSRKLYNWLKVAPYRPVQQVEDDDFMDENQGKGIRVLGIAFSSARDHPV
FCALVNGDGEVTDFLRLPHFTKRRTAWREEEQEKKAQDIETLKKFLLNKKPHVVTIAGEN
RDARMMIEDVKRIVHDLDQGQQLSSIGVEMVDNELAVLYMNSKKSEAEFRDYPPVLRQAV
SLARRIQDPLIEFAQVCSTDEDILCLKFHPLQEHVAKEELLNALYCEFINRVNEVGVDVN
RAIAHPYSQALIQYVCGLGPRKGTHFLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGF
LKIDTASLGDSTDSYIEVLDSSRVHPESYEWARKMAVDALEYDESAEDANPAGALEEILE
NPERLKGLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEVFNMLT
KETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWN
HFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEK
FSADLTCRTSNLMDKNNEWKLPKDTYYDFDAEAADHKQKEDMKRKQQRTTYIKRVIAHPS
FHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVQEEGKENAFSL
GATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECGGGDRKKLEELLIKTKKEK
PTFIPYFICACKELPGKFLLGYQPRGKPRIEYVSVTPEGFRYRGQVFPTVNGLFRWFKDH
YQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQG
QNPNATPAQWASSQYGYGGSGGGSSAYHVFSTPAKQPVAVATPLMTPSYSYTTPSQPITT
PQYHHLQTNTTPQSTQAQAQPRPSSSSRHRQQPKSNSHAAIHWEKMAEQWLQEKEAEHRK
QKQWLTPRPLPSPMIESTPMSIAGYATPLLDEMDR
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagcaaggcagaggagtccgaggaagagtacaatgacgaggga
gaggtggttcctcgagtcaccaagaagtttgttgaagaagaagaagatgatgaagaggag
gaggaagagaacctggatgaccaggatgaacaggggaacttgaaaggcttcatcaatgat
gatgatgatgatgaagaggaagaagaggaggatgtgggacacaaaaagcggaagcgcaca
gcttttgatgacctcctggaagatgatgacttcgatctcattgaagagaacctgggtatc
aaagtcaaacgtcaaaagttcaggcgtgtgcggaaaatgtcagatgatgaggatgatgat
gaagaagaatatgggaaggaggagcatgagaaagaggccattgctgaggaaatctttcaa
gatggtgaaggggaagaaggacaagaggctgtagaagcccctatgactgcacctgaggaa
gaagaagatgaagagtcagatattgatgacttcatagtggatgatgatggacagcctctt
aagaagcccaaatggaggaaaaaactcccaggctacacagatgcggccctgcaggaagct
caggagatctttggggtagactttgactatgatgagtttgagaagtacaatgagtatgat
gaggaactggaagaggaatatgaatatgaggatgatgaagctgaaggtgagatccgggtg
cggcccaaaaagaccaccaaaaagcaggttagctggcgaagcattttcgagatgtatgaa
cccagtgagctggagagcagccacctaacagaccaggataatgagatccgagccactgat
ctgccagagagattccagttgcgttccattcctgttaaggcagctgaagatgatgagctt
gaagaagaagctgactggatctataggaatgcctttgcctctccaaccatttctctccag
gaaagttctgattacctggaccgtgggcagcctgtcaacagtttcagtcgtaaaggcccc
agcactgttcagaagatcaaagaggccctgggtttcatccgcaatcagcattttgaggta
cctttcattgctttctaccgaaaggagtatgtagaacctgagctgcatataaatgatctc
tggagagtgtggcagtgggatgaaaagtggacacaattgaagattcgaaaagagaatttg
actcggctttttgagaagatgcaagcttatcagtatgagcagatatctgcagacccagac
aagcccctgcctgatggcatcagggctttgcacaccacagatatggagagattaaaagat
gtgcagtcaatggatgagttgaaggacgtttacaatcacttcttactctactatgggcgt
gacatcccaaagatgcagaatgctgccaaggccagccggaagaagttaaagcgcatccgg
gaagatggggatgaggaggaaggtgaaggggaagaagtagaagatgagcagaaaggtcca
gagctcaagcaggcctctcgcctagacatgtataccatctgccaaagtgctggcctagat
ggcctggccaagaagtttgggctcaccccagaacagtttggggagaacctccgggacagc
tatcagaggcatgaaacagagcagtttcctgctgagcccctggagctggcaaaagactat
gtgtgcagtcagttcccaaccccagaggcagtgctagagggtgctcgatacatggtggcc
ctacagattgcccgagaacctctagtccgacaggtgcttcgacagaccttccaggagagg
gctaaagttaacatcaccccaaccaagaagggcaagaaggatgtggatgaggcccactat
gcctactctttcaagtatctgaagaacaaacctgtgaaagaacttagggatgaccagttc
ctcaagacatgcctggctgaagaggaaggcctactcaccattgatatcagcattgacatg
aaaggagttgagggctatggcagtgaccagacatactttgaagagatcaagcaattctac
taccgagatgagtttagccaccaggtgcaggagtggaaccggcagcggaccatggccatt
gagcgggccctgcagcagttcctctatgtgcagatggccaaagagctaaagaataaactg
ctggctgaagccaaagaatttgtcatcaaggcttgtagccgaaagctgtacaactggctg
aaggtggccccctaccgacctgtccaacaggtagaagatgatgattttatggatgaaaac
caagggaaaggcatccgggtcctagggattgccttctcctctgccagagaccaccctgtg
ttttgtgccttggttaatggagacggagaggtgacagatttcttacggttgcctcacttt
accaaacggaggactgcctggagggaagaagaacaggaaaaaaaagcccaggacattgaa
accctaaagaaattccttctgaacaagaaaccacatgtggtaacaattgctggcgagaac
agagatgcccggatgatgattgaagatgtgaaacggattgtacatgaccttgaccaaggc
cagcagctatcatccattggggtggaaatggtggacaatgaactggctgtcctgtacatg
aatagcaaaaagtctgaggcagagttcagagattaccccccagtgctgaggcaggcagtg
tctctggcccgacggattcaggaccctttgattgagtttgcacaggtgtgcagcacagat
gaggacattctttgtctcaagttccaccccttgcaggaacatgtggcaaaggaggagcta
cttaatgccctgtattgcgagttcattaatagagtcaatgaggttggtgttgatgtcaat
cgagccatcgcccacccctacagccaggctctgatccagtatgtctgtggcttggggcca
cgcaaaggaacccatttcctaaagattctgaagcaaaacaatactcgcctagaaagccgg
acccagctggtcaccatgtgccatatggggcccaaggtcttcatgaactgtgctggtttc
ctcaaaatagacacagcctctttgggtgacagcactgactcctatatagaggttttggat
agctcccgggtccatcctgagtcttacgaatgggccaggaagatggcagtggatgccctg
gaatatgatgaatctgcagaggatgccaaccctgcaggggctttggaagagatcttggag
aacccagaacgactcaagggcttggaccttgatgcctttgcagaagagctcgagaggcag
ggatatggtgataaacacatcacattgtatgacatccgtgctgagctgagctgcaggtac
aaggatctccggacagcttaccgctctcccaacactgaggaagtcttcaacatgctgact
aaggagactccagaaaccttctacattggaaagctgatcatctgcaatgtcactggaatt
gcccatagacgcccacaaggcgagagctatgaccaggcaatccgaaatgatgagacagga
ctgtggcagtgtcccttctgccagcaggacaatttccccgagctgagtgaggtctggaac
cactttgatagtggctcttgcccaggacaagccattggtgtcaagactcgactggacaat
ggagtcactggctttatccctacaaagtttctcagtgacaaggtggtgaagcggcctgag
gagcgagtgaaggtggggatgactgttcactgccgcatcatgaagattgacattgagaag
ttcagtgcagatctgacttgccgtacctccaatctcatggacaagaacaatgagtggaag
ttgcccaaagacacttattatgattttgatgctgaagcagctgaccacaagcagaaagag
gacatgaaaaggaagcagcagaggaccacatatatcaagagggtgattgcgcatccttcc
tttcataatattaactttaaacaagcagaaaagatgatggagaccatggaccagggtgat
gtgattattcggccaagcagtaaaggagagaaccacctaacagtgacctggaaggtcagc
gatggcatctatcagcatgtggatgtccaggaggaaggcaaagagaatgcctttagcctg
ggggccaccctgtggatcaatagtgaggaatttgaggacctagatgaaattgttgcccga
tatgtccagcctatggcatcctttgctcgagatctgcttaaccacaagtattaccaggaa
tgtggtggtggggatcgcaagaaactagaggagctgctcatcaaaaccaagaaagaaaaa
ccaactttcattccctattttatctgtgcctgtaaggaactgcctggcaaattcctgctg
gggtaccagccgcggggtaagccaagaatagaatatgtgagtgtgactccagagggattc
cggtaccgaggccaggtcttccccactgtgaatgggctcttccgatggtttaaggatcat
taccaggaccctgtgccaggtatcactcccagcagcagcagcaggacccggacccctgcc
tccatcaatgccacccctgccaacatcaaccttgcagatctgaccagagcagtaaatgcc
ctgccccagaatatgacgtcacaaatgttcagtgccatcgctgctgtgactggccaagga
cagaatcccaacgccaccccagcccaatgggcctccagccagtatggctatggtggcagt
ggaggaggcagcagtgcttatcacgtgttctccaccccagccaagcaacctgtggccgtg
gccacgccactgatgactcccagctattcatacacaacccccagccagcccatcaccact
ccccagtaccaccacctacaaaccaacaccaccccacagtccactcaagcccaagcccag
ccccggccttcctccagctcccggcaccgacagcagccaaagtccaacagccacgccgcc
atccactgggagaagatggcagagcagtggctacaggagaaagaggcggagcatcggaaa
cagaagcagtggctgactcctcggcccttgcccagccccatgatcgagagcacccccatg
tccatcgctggctacgccacgccgctgctggatgaaatggaccgctag
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integrated database retrieval system
