Gracilinanus agilis (agile gracile opossum): 123231467
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Entry
123231467 CDS
T07702
Symbol
RHBDF1
Name
(RefSeq) inactive rhomboid protein 1
KO
K27588
inactive rhomboid protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
123231467 (RHBDF1)
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Gene cluster
GFIT
Motif
Pfam:
iRhom1-2_N
Rhomboid
Herpes_UL56
Motif
Other DBs
NCBI-GeneID:
123231467
NCBI-ProteinID:
XP_044513662
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Position
1:142393849..142438160
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AA seq
873 aa
AA seq
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MTEARRDSSSSLQRKKPPWLKLDIPASTPVPGPGLAPAPAPAPAPAPATEEPIFVPPLKR
QAFLRSVSMPAESARVPSPHEPTRRPALQRQMSITQTIRRGTADWFGVSKDSDANQKWQR
KSIRHCSQRYGKLKPQVIREMDLPSQDNISLTSTETPPPLYVGPCQLGMQKIIDPLARGR
AFRVADDTDGYSIPHTPITPGATSLCSFTSSRSGFNRLPRRRKRESVAKMSFRAAAALVK
GRSVRESTLRRAQRRSFTPASFLEEDTVDFPEELDTSFFAREGVLHEELSTYPDEVFESP
SEAALKEWEEKPPEQADLTGGALDRSELERSHLMLPLERGWRKQKEGAAVASQPKVRLRQ
EVVSVAGPRRGQRIAVPVRKLFAKEKRPYGLGMVGRLTNRTYRKRIDSYVKRQIEDMDDH
RPFFTYWLTFVHSLITILAVCIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIG
PSSEALIHLGAKFSPCMRQDQQVHNFIQATREREKHSACCVRNDRSGCVQTSEEECSSTL
AVWVKWPVHPSTANLAGNKRQFGSVCHQDPRVCDEPSSEDPHEWPDDITKWPICTKNSAG
NHTNHPHMDCAITGRPCCIGTKGRCEITSREYCDFMRGYFHEEATLCSQVHCMDDVCGLL
PFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGIT
GNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFG
LLPWIDNFAHISGFISGFFLSFAFLPYISFGKFDLYRKRCQIIIFQIIFLGLLSGLVILF
YFYPIRCEWCEFLTCIPFTDKFCEKYELDAQLH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggctcggagggacagctctagcagcttacaacgaaagaagccaccatggcta
aaactggacatcccagcttcgaccccagtcccaggcccaggcctggccccggccccggcc
ccagccccggccccagccccagccactgaggagcccatctttgtgccgcctctgaaacgc
caagcctttcttcggagtgtcagcatgccggccgagagtgcccgagtgccatctccccat
gaaccaacccggcgtccagccttgcagagacagatgtctattacccagaccatccgcagg
ggcacagctgactggttcggggtgagcaaggacagcgacgccaaccagaaatggcaacgc
aagagcatccgtcactgcagccagcgctacgggaagctgaagccccaagtgatccgagag
atggacctcccgagccaggacaacatctctctcaccagcaccgagacgcctcccccgctc
tacgtggggccctgccagctgggcatgcagaagatcatcgaccctctggcccgaggccgg
gcgttccgcgtggcagatgacacggacggctacagcatcccccacacgcccatcacgccc
ggggccacctccctctgctccttcaccagctcccgctctggcttcaatcgccttcccagg
aggcggaagagggaatctgtggccaagatgagcttccgggcagcggcggccctcgtgaag
ggccgctctgtgagggagagcactctgcgcagggcccaacgacgaagcttcacacccgcc
agcttcctggaggaagacactgtggacttccccgaggagctggacacgtccttctttgct
cgggaaggagtcctccacgaggagctgtccacctatccagacgaggtgtttgaatcccct
tcagaagccgccctcaaagagtgggaagagaagcctccggagcaggcggacctcacgggg
ggcgctctggacaggagcgagctggaaaggagccacttgatgctacctctggagcggggg
tggcggaagcagaaggagggggccgccgtggcttcccagcccaaggtgcggctgcggcag
gaggtggtgagtgtggcggggccacggcgaggtcagcgcatcgctgtgccagtcaggaag
ctctttgccaaggagaagaggccctacggactgggcatggtgggtcggctcaccaatcgc
acctatcggaagcgcatagacagctacgttaagcggcagattgaggacatggatgaccac
aggcccttctttacctactggctgaccttcgtgcactcgctcatcaccatcctggccgtg
tgcatctacggcattgcccccgtcggcttctctcagcacgagacggtggactcggtcttg
cggaacagaggagtttatgagaatgttaagtatgtgcagcaggagaacttctggatcggc
ccaagttcagaggcgctcatccacctcggggccaagttctctccatgcatgcggcaggac
cagcaggtgcacaatttcatccaggccactcgcgagcgagagaagcactcggcctgctgt
gtacgaaatgaccgatcaggctgtgtgcagacttctgaggaggagtgctcctccacattg
gccgtgtgggtgaagtggcctgttcaccccagcactgcaaacctggctgggaacaagagg
cagtttgggtctgtctgccaccaggaccccagggtatgtgatgagccatcctctgaggac
ccacatgaatggccagatgacatcactaagtggccgatctgcaccaaaaacagtgctggg
aaccacaccaaccacccccacatggactgtgccatcaccgggaggccttgctgcattggt
accaaaggaaggtgtgaaatcacttctcgagaatactgtgacttcatgaggggctatttc
cacgaggaggccaccttgtgctcccaggtgcactgcatggatgacgtctgtggccttctg
cccttcctaaaccctgaggttcctgaccagttctatcgcctctggctctctcttttccta
catgctgggatcttgcactgcctggtatctgtctgcttccaaatgacgattcttagggac
ctggagaagctagctgggtggcaccgtatctccatcatctaccttctgagtggcatcaca
ggcaacctggccagtgctatcttcttgccctaccgggctgaggttggccctgctggctcc
cagtttggcatccttgcctgcctgtttgtggagctgttccagagttggcagatcctggct
cggccttggcgagccttcttcaagcttctggctgtggtgctattcctcttcacctttggc
ctcctgccatggatcgacaattttgcccacatctctggcttcatcagtggcttcttcctt
tcctttgccttcttgccctacatcagcttcggcaagtttgacctgtatcgaaagaggtgc
cagatcatcatcttccagatcatcttcctggggctcctctctggcctagtgatcctcttt
tacttctacccaatccgctgtgagtggtgcgagttcctcacatgcatccccttcacagac
aagttttgcgagaaatatgaattggatgctcagctccactga
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