Gracilinanus agilis (agile gracile opossum): 123231668
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Entry
123231668 CDS
T07702
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
123231668 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gas04040
]
123231668 (TRPA1)
Ion channels [BR:
gas04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123231668 (TRPA1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
123231668
NCBI-ProteinID:
XP_044513889
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Position
1:495247267..495316124
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AA seq
1123 aa
AA seq
DB search
MKRNKKKVLIISGENKEPQDALYEGVEHEMDASEENVFKVIHEGNVKGLQSFMMKNHDGL
CTYDELNATPLHHAAAQDQVELLEMIIDDSSSEGLNIMDISGNTPLHWATEKNQVENVKL
LLSRGADPNLCNNNLMAPLHLAIQSCYNEIVKVLVEHSSTDVNLKGENGSTPVLLACSKD
NSEALKLLMHHGAKVCRKNKFGCYPVHIATFSGAKKCLELLLKFGEEQGISRQFQMNFIN
NKNSSPLHFAVQSGDLEMIKICLDNGAEINLEETGKCTALHFAATQGAIEIVKLMISSYS
GNNDIINSVDGNNETLLHRVALFDHHELAEYLISMGANIDSIDLEGRSPLLLATSSASWN
VVNLLLSKGANVEIKDLYGRNFLHLTVLQPYGLKNLKQEFLQMKHIENLVMDEDIDGCTP
LHYACRQGVALSVNNLLCLNVSIGSKSKDNKSPLHFAANFGRINTCQRLIRDMTDTRLLN
EGDQNGMTPLHLAAKNGHDKVVKFLLKKGALFLSDYNGWTALHHASMGGYTQTMKIILDT
NVKCTDHVDEEGNTALHYAAREGHAKAVALLLDYDAQILMNKQSATFLHDAIHNRRKEVV
ITTIRSKRWNECLTVFNVLSVTNKCAVLEMVEYLPDCMKTLLDICIVESSEERSCQNFHV
EYNFKYLQSPVELREKEVNATVYGPLTTLNAMVLHNRRDLLDHPVCREYLLMKWMAYGFR
AHMVNLGLYCLGLIPMTILISNMKPSVAFNSTGNINSTNGGSNSLDPQNSYLTKVCMILV
FLSSVFGFCKEMIQIYQQRTNYFLDHTNLIEWIIYTTSIVFVSPLFVSIPVDIQLQCGAI
SVFLFWMNFLLYLQRFENYGIYVVMLLEITKTLLKTTFVFFFLILAFGLGFHVLLGSQSA
FSTPTLSIIQTFSMMLGDINYHDAFLGPYLDKNLPYPLVSFIFLIIFTLYIPIVLMNLLI
GLAVGDIAEVQKNASLKRIAMQVKLHTSLEKKLPFWFLNKVDQETVIVYPNRRKNFGLMN
IFQFYFCPRYTKPEIQSADTPLELELLKQKYRLKDLALLLEKQHELVRLIIQKMEIISEA
EDEDNNFSFQQKFRKQQLERNSKWHSVLKAVKAKKKLCLISHN
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaataagaagaaagtactgatcatctccggggagaacaaggagccccaggac
gctctctacgagggagtggagcacgaaatggatgcctcagaggaaaatgtgtttaaggtg
attcacgaaggaaatgtaaagggattgcaaagcttcatgatgaagaaccatgatggttta
tgcacatatgatgaactgaatgctactcccctgcatcatgcagctgcccaagatcaagtt
gaattgctagagatgattattgatgactcttcttcggaaggactgaacataatggatatt
tcaggaaatactcctttgcactgggccactgaaaaaaatcaggttgaaaatgtaaagtta
cttcttagcagaggagctgatccaaacctttgcaacaacaacttgatggcaccccttcat
ctagcgattcaaagttgttataacgaaatagtgaaggttttggttgagcatagtagtact
gatgtcaatttgaaaggagaaaatggaagcacacctgtgttgctggcctgctccaaagat
aacagtgaagcactaaaactcctgatgcatcatggggcaaaagtatgtagaaaaaacaaa
tttggatgttatccagtgcacatagctacattttcaggtgccaagaaatgcctagaatta
cttttaaagtttggtgaagaacaaggaatttccaggcaatttcaaatgaatttcatcaat
aataaaaattcaagtcctctccattttgctgttcaaagtggtgatttagaaatgattaaa
atatgcttggataatggagcagagattaatctagaggagactgggaaatgcactgctctt
cattttgctgccactcaaggagcaatagagattgttaaactgatgatatcctcttattct
ggcaataatgacattattaattcagtagatggaaataatgagacattacttcacagagtg
gcattatttgatcaccatgaactggctgaatatttaatttcgatgggagcaaatattgac
agtattgatttggaaggtcgttctccacttctactagcaactagttctgcatcatggaac
gtagtgaatttattactttctaaaggagcaaatgtagaaataaaggatctttatgggcga
aactttttacatttaactgtcttacagccttatggactaaaaaatttgaaacaagagttt
ctgcagatgaaacatattgaaaatcttgtaatggatgaagacattgatgggtgtactcct
ctccattatgcatgcagacaaggtgtagctctttctgtaaataacttgctttgtttgaat
gtttccattggtagcaaaagcaaagataacaagtcacccttgcattttgcagccaatttt
ggccgtataaacacctgtcaaagactcattcgtgacatgactgatacaagacttttgaat
gaaggtgaccagaatggaatgactccattacacttggcagcaaaaaatggacatgataaa
gtagtcaagtttctcttgaaaaaaggtgccctatttctcagcgattacaatggttggacc
gcacttcatcatgcttccatgggaggatacactcagaccatgaagatcattcttgatact
aatgtgaaatgtacagatcatgtagatgaagaagggaacactgcccttcactatgctgca
cgggaaggacatgccaaggcagttgccctacttttggattatgatgctcaaattctcatg
aacaagcaatcagctacctttttgcatgatgccattcataataggagaaaggaggtggtt
attactaccattagaagcaaaagatggaatgaatgtttgacagtattcaatgttctttct
gtaaccaataaatgtgctgtgctggagatggtggaatacctccctgattgtatgaaaact
cttttagatatctgcattgtggagtcttcagaagaaaggtcatgccaaaatttccatgtt
gagtataattttaagtatcttcaaagtccagtagaactaagagagaaagaggtcaatgcc
acagtttatgggccacttaccacactcaatgcaatggtattacataatcgtagagacctt
cttgaccatcctgtttgcagagaatatttacttatgaaatggatggcttatgggtttaga
gcccatatggtgaaccttggattatactgtcttggccttatccctatgaccattctcatt
tctaatatgaagccaagtgtggcttttaattcaacgggaaacatcaatagtaccaatggt
ggatcaaactccttagatcctcagaattcatatctcacaaaagtttgcatgattttagtt
tttctgtcaagtgtatttggattttgcaaagaaatgatccaaatctaccaacagagaaca
aattactttttggatcacactaatctaatagaatggataatctatacaactagcatcgtt
tttgtgtcacctttatttgtcagtataccagttgatatccagctgcaatgtggagcaatt
tctgttttcttgttctggatgaacttcttattgtatcttcagagatttgaaaattatggg
atctatgttgtaatgttgttagaaattactaaaaccttgctgaagactacttttgtgttt
tttttcctaatcctggcttttggccttggattccatgttctcctgggttcacagagtgca
ttctccactccaacgctctctataattcagacctttagcatgatgctgggagatattaat
tatcatgatgcttttcttggaccatatctggataaaaatttgccatatccccttgtatca
tttatattccttattatcttcaccttgtatattccaattgttctaatgaatttacttatt
ggtttggcagttggtgacattgccgaggtacagaagaatgcatctctgaaaaggattgcc
atgcaggtgaaacttcataccagtctagagaaaaaacttccattttggttccttaataag
gtggaccaggaaacggtcattgtatatcctaacaggaggaagaactttggattaatgaat
atatttcaattctacttttgtcctcgatatacaaagccagaaatacagagcgctgatacc
cctttagaattggaacttttaaagcagaaatacaggctgaaggatcttgctttacttctg
gaaaaacagcatgagctcgtcagacttatcattcagaagatggagattatctctgaagca
gaggatgaagacaataatttttcatttcaacaaaaatttaggaaacaacaattagagaga
aatagcaaatggcacagtgtgctaaaagcagtgaaagcaaaaaagaaattatgtttaata
tcccacaactag
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