Gracilinanus agilis (agile gracile opossum): 123231826
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Entry
123231826 CDS
T07702
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123231826 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123231826 (NHLRC1)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123231826 (NHLRC1)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123231826 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
Baculo_IE-1
RING_XB3-XBAT31
Prok-RING_4
zf-C3HC4_2
FYVE_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
123231826
NCBI-ProteinID:
XP_044514067
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All DBs
Position
1:598197421..598202312
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AA seq
405 aa
AA seq
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MSAEASDREPALRALVREAEVSLLECKVCFEKYSHEKDRRPRNLTCGHVVCQGCVTALTQ
PRNRTLECPFCRKAGKSSETSDCLPLLQFLELLDPVLRVPPSAGPGAAKGPGDPTANWVP
GALTCCHSFGGWGTLINPTAMAVCPRSGRVIIVHDGRKRVKVFDCDGICSHQFGEKGEAA
QDVRYPLGVTATSDGHVVITDAGDRSVKVFDFSGHHKLVIGGRFSLPWGVQTTQQKEVLV
SDAGAGSLHLLVVDFQKGELRRAERLLAHLCNPRALAVSQLTGAIAITEHLLAQGPCPPS
TRVKVFSPGLQLLGQVDTFGLSLFIPSKIDVTAVTFDHQGNVIVADTATQAIVCLGKPEE
FPVLKPIITQGLSYPVALTYTEDNSLLVLDSGVHAVKVYKTDCSF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaggcttccgacagagagccggctctgagggctctggtgagggaagccgag
gtcagcctgcttgagtgcaaagtgtgctttgaaaaatacagccatgagaaagaccggagg
cccaggaacttgacctgtggccatgtggtctgccagggctgtgtgactgctctgacgcag
ccccggaatcgcactctcgagtgccctttttgcaggaaagcgggcaagagctccgagacc
agtgactgcctcccgctgctgcagttcctcgagctcctggaccccgtgctccgcgtaccc
ccatccgcagggcccggggcggccaagggaccgggagacccgacagccaactgggtcccc
ggggctctaacctgctgccattcctttgggggttgggggacccttatcaaccccactgcg
atggccgtgtgcccgaggtccgggagggtgatcatagtgcatgacggcaggaaaagggtg
aaggtatttgactgcgacggaatatgtagccatcagtttggagaaaagggggaggccgcc
caggacgtccggtatccgctgggtgtcacagccacctctgacggccacgtggtcatcacc
gatgctggggaccgttcagtgaaagtgtttgatttttcagggcatcataagctggtcatt
ggaggtcgcttctctttgccttggggtgtgcagaccacccagcagaaggaagttctggtg
tctgatgctggggcagggtcgcttcacctcttggtggttgactttcagaaaggggagctt
aggagggcggaaaggctcctggctcatctctgcaaccccagagccctagctgtgtctcag
ctcactggggccatcgccataacggaacatctgctagcccaggggccctgccctcccagc
accagagtgaaagtgttcagccctggcttgcagctcctgggccaggtggacacttttggc
ctgagcctcttcattccctccaaaatagatgtcactgccgtgacctttgaccaccagggg
aatgtcattgttgctgatacagctacccaagctatagtgtgcttagggaaacctgaggag
tttccagtcttgaagcctatcattacccaagggctttcttaccctgtggcattgacttac
acagaagataactcccttcttgtcctagacagtggagtccatgctgtaaaagtctataaa
actgactgctcattctag
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