Gracilinanus agilis (agile gracile opossum): 123231844
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Entry
123231844 CDS
T07702
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123231844 (RBBP6)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123231844 (RBBP6)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
U-box type E3
123231844 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
123231844
NCBI-ProteinID:
XP_044514088
LinkDB
All DBs
Position
1:complement(146412987..146450790)
Genome browser
AA seq
1774 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIPPPPPPIPPPRPLIQRNLQPLMRP
PISRQQDPLMIPVTSASTHAATSISSSMTPNQSSLSSAVPINQPSTPAPVPDITATVSIS
VHSEKPDGPFRDPDNKIIPAAALVSDHPKASSSIAISALMEEKGYQVPVLGTPSLLGQSL
LHGQLIPTTGPVRINAARSAGGRPGWEPSINRGRHHGERSQRTQGPSLPATPVFVPVPPP
PLYPPPPHTLPLPPGVPPPQFPPQFPPGQPPPAGYSVPPPGFPPAPTNLSTPWVSTAVQT
AHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRS
FSRSKSPYSGSSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSR
NYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPPVFRGQSPNKRNIPQGETEREYFNRYREV
PPPYDIKAYYGRNVDFRDPFEKERYREWERNYREWYEKYYKGYAAGAQPRPPANRENFSP
ERFGPLGNRRENSPFARGRREDYSGVQGHRSRNIGGNYPEKLSARDGHTMKDSAKSKEKE
SENPPGDGKGNKHKKHRKRRKGEENEGFPNTELLESSRKQREPVGGEDIKTDSLFILPSR
DDATPVRDEPMEAESIPFKPVSEKEKKEKDKPKAKGDKTKRKNEGTTGSKKESTAKPVKA
SQEKTDIEREKSPRSEPPSKKAKEEVPKTESTKSSSQKEEKTISTPRKAHPKMTKEHQET
KSIKEEKVKKEYSKDAKQEKLANKEEKSKKTNEKSKPADAKPEKRKRKAEEKGVDKEHEI
LSLKSSKPEVAEMMKPSPKRKIEPDAEKTDRTPEKDKAVLTAPAKKIKLNRETGKKIGSG
ENLPNAKELTEKLEPTSSKIKQEKVKGKVRRKVTATEGSSSTLVDYTSTSSTGGSPVRKC
EEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTQALSSV
GKPASVIKNVSTKPSNPVKLIEKESEPSEKIQKPTKEVSHESVQHEAKSSKTCSSSDKGK
TKDRDHSVSDKENSEKRKSSIQTEKDTSVDRINEQGNFKSLSQSSKDSRTSDKHDSGRSS
SSKDFTPNRDKKVDYDNRDHSGSKRRDERSDLARRKDSPSRTKLESSLGQKNKLKDERTD
LPKKGVGESKRSNSSPSKDRRPYDHKAAHDSKRSNDDNKSVDKNPVKEREKHISETKNNK
EKELSGNKLFCRHSSPDTQIEKEHVTTGQNDKTVVKPKPQLSHSSRLSSDLTRETDEAAF
VPDYNESDSESNVSAKEEETLGKNPKELKEKVAEKAKETLETTVVGQIGIRSQSQSSPSV
SRSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHTGTELELE
KSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctccaaactcaactatgataccgttacctttgat
ggacttcacatctccctgtgtgatttgaagaagcaaatcatggggagagagaaactcaag
gctgctgactgcgatctacagatcaccaatgcacaaacgaaagaagaatacacagatgac
aatgccctgattcccaagaattcatcggttattgtaagaagaattcctattggaggtgtt
aaatctacgagcaagacatatgttataagtcgaactgaaccagtgagtggaacctcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcacagtctggccac
gaatatgatccgatcaattacatgaagaaacctctgggtccacctcctccatcttacacc
tgtttccggtgtggtaaacctggccattacataaagaattgcccaacaaatggggataaa
aactttgaatcagttcccagaattaaaaagagtactggaattcctagaagttttatgatg
gaggtgaaagatcctaatatgaaaggtgccatgcttaccaacactggaaaatatgcaatc
ccaactatagatgcagaggcatatgccatagggaagaaagaaaaaccacctttcctacca
gaggaaccatcctcttcatcagaagaggatgaccctatcccagatgaattgttatgtcta
atctgcaaagatataatgactgatgcagttgtcataccttgctgtggaaacagttattgt
gatgaatgtataagaacagcattgctagaatcagatgaacatacatgtccaacttgtcat
cagaatgatgtatctcctgatgctttaattgccaacaaatttttgcgccaggctgttaat
aacttcaaaaatgaaactggttatactaaaaggcttcgaaagcaaatacccccaccccca
cctccaattccacctccaagaccactgattcagcggaacctacaaccactgatgagacct
ccaatttcaagacaacaggaccctttgatgattccagtgacatctgcatctactcatgct
gctacttctatatcatcatccatgactcctaatcaatcttccctatcctctgctgtacct
ataaatcaaccttctactccagcaccagttcctgatataactgccacagtgtctatatct
gtccattcagaaaaaccagatgggcctttccgtgatcctgataataaaattatacctgct
gcagctttggtatcagatcatcctaaagcttcttcatcaatagcaattagtgcactaatg
gaagaaaagggctatcaggtacctgtacttggaaccccttctttgcttgggcagtccctt
ttgcatggacagttgatacctacaactggtccagtaagaataaatgctgctcgttctgct
ggtggtagacctggttgggaaccaagtataaatcgaggacgacatcatggtgaacgctca
cagaggactcaaggcccatcactaccagcaacaccagtctttgtacctgtaccaccacct
cctttgtatccaccacctccccacacacttcctctccctccaggtgttccaccacctcag
ttccctcctcaatttccacctgggcaaccaccacctgctggctacagtgtccctcctcca
ggtttccctccagcacctacaaatttatcaacaccttgggtatcaacagcagtacaaaca
gctcattcaaatactatcccaacaacacaagctccacccttatccagggaagagttctac
agagagcaaagacgactaaaagaggaggaaaagaaaaagtccaaactagatgagtttaca
aatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgctca
ttttcaaggtctaaatcaccatatagtggctcctcctattcaagaagttcatatacctat
tctaaatcgagatctggttcctcacgttcccgttcctattctcgatcctttagtcgttca
cactctcgttcttattcacgatcccctccatatcccagaagaggcagagggaaaagtcga
aattatcgttcaagatccaggtctcatggatatcaccgctccagatctaggtcgccccca
taccgacgatatcattcacgatcaagatcacctccagtttttaggggacaatctcctaat
aagcgaaatatacctcaaggagaaacagaacgtgaatattttaacagatacagagaagtc
ccaccaccttatgatataaaagcttactatggtaggaatgttgactttagagacccattt
gaaaaagaacgatacagagaatgggaaagaaattacagagagtggtatgaaaaatattac
aagggttatgctgctggagcacaacctagacctccagcaaatagggagaacttttctcca
gagagatttggaccactgggcaacagaagagagaattctccctttgctcgaggtcgcagg
gaagattattctggtgtgcaaggtcaccgcagtcgcaacataggtggcaattacccagaa
aagctttcagcaagagatggtcacaccatgaaggatagtgccaagtcaaaagagaaggag
agtgaaaatccaccaggagatggaaagggaaacaaacataagaaacaccgaaagagaaga
aagggagaagaaaatgaaggatttcctaacacagagttgctagagagttctagaaaacaa
agagaacctgtaggtggggaagatattaaaacagactccttgttcattctccccagtaga
gatgatgccacccctgttagagatgaaccaatggaggcagagtcaataccttttaaacct
gtatcagaaaaggagaagaaagaaaaagacaaaccaaaagcaaaaggtgacaagactaaa
cgtaaaaatgaaggaactactggttcaaagaaagagagcactgcaaaacctgttaaagca
tcgcaggaaaaaacagatatagaacgtgaaaagtctccaagatctgaaccaccatccaaa
aaagccaaagaggaggtgccaaagacagagagtactaaatcctcctcccaaaaagaagaa
aagaccattagtacacccagaaaagctcaccctaagatgacaaaagaacatcaagaaaca
aaatccatcaaggaggaaaaggttaaaaaagaatattcaaaagatgccaaacaagaaaag
ctagctaacaaggaggaaaagtcaaaaaagactaatgagaaaagtaagccagctgatgcc
aagccagaaaaaagaaaaagaaaagctgaagaaaagggtgttgataaagaacatgagatt
ttgtcattgaaaagctctaaaccagaagttgctgaaatgatgaagccgtcaccaaagcgg
aaaattgagccagatgctgagaaaacagatagaaccccagaaaaagacaaagctgtgtta
actgccccagccaaaaagattaagctcaacagagaaacaggaaaaaaaattggaagtgga
gaaaacctgcccaatgcaaaagaactcactgaaaaattggagccaacatctagtaaaatt
aaacaagaaaaagttaaaggaaaagtaagaagaaaagtaacagccactgaaggatctagc
tcaactcttgtggattataccagtaccagttcaactggaggtagccctgtaaggaagtgt
gaagaaaaaacagacacaaaacgaactgtcattaagaccatggaagaatataataatgat
aatacagctcctgctgaagatgttattattatgattcaggttcctcaatcaaagtgggac
aaagatgactttgaatctgaagaggaagacattaaatctacacaagctttgtcaagtgta
ggaaagcctgctagtgttataaaaaatgttagcactaagccatcaaatcctgtaaaactt
attgaaaaagaaagtgagccatcagagaaaattcagaaacccacaaaagaagtaagccac
gaaagtgtacagcatgaggccaaaagttccaaaacttgttcatccagtgataaaggaaaa
accaaagatcgggatcattctgtgtcagataaggaaaactctgaaaaaaggaaaagcagc
attcagacagaaaaagatactagtgtagatcgtataaatgaacaaggaaacttcaaaagt
ctttctcaatcttccaaagacagtagaacttcagataaacatgattctgggcgtagttcc
tcaagtaaagactttacacctaatagagacaaaaaagtagactatgataacagggatcac
tctggttccaaacggagagatgaaaggagtgacttggcaagaagaaaagattctccttct
cgaactaaactagaatcttcactgggtcagaaaaataaactgaaggatgagaggacagat
ttacctaaaaagggagttggagaatcaaaaagaagcaactctagtccttcaaaggatagg
agaccatacgatcacaaagctgctcatgattccaaacgttcaaatgacgacaataagtct
gtggacaaaaatccagttaaagaaagggaaaagcatatatcagaaacaaagaacaataaa
gagaaagagttaagtggaaataaattattttgtaggcatagctcaccagatacacaaatt
gaaaaagagcatgttactactgggcagaatgataagactgttgtcaaacctaagccccag
ttaagtcattcctctcgactttcttcagacttaacaagagaaactgatgaggctgctttt
gtaccagactataatgaaagtgacagtgagagtaatgtgtccgcaaaagaggaagaaact
ttggggaaaaatcctaaggaactgaaagaaaaggtggcagagaaagctaaagagaccctg
gagacaacagtagttggccaaataggtataagaagtcagagtcaaagtagtcctagtgtt
agccgaagtcgcagtcatagtccttctggaagccaaacacgaagccacagcagcagtgct
agctcagcagaaagtcaagatagcaagaagaagaaaaagaaaaaggaaaaaaagaagcac
aagaaacataaaaaacataagaaacataagaaacacacaggcactgagttagaattggaa
aagagccaaaaacacaagcataagaagaaaaaatccaagaaaagcaaagataaagaaaag
gagaaggaaaaggatgaccaaaaagttaaatctgtcactgtataa
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integrated database retrieval system
