Gracilinanus agilis (agile gracile opossum): 123232206
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Entry
123232206 CDS
T07702
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123232206 (USHBP1)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
USH complex and associated proteins
123232206 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
123232206
NCBI-ProteinID:
XP_044514519
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All DBs
Position
1:complement(725189088..725206115)
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AA seq
748 aa
AA seq
DB search
MGYQELRCNKTKEKGHKAFVMSDWTDSLGGSQQGLPPLCPPQARPKPMMSSRATRPRSRR
GRVPPPVELDPVVESTEEAEAVGSSVGPEQAPRLPPEESPAEPLVTSAEKSHGGHCQRLD
RHRDEQTEASEPSNSLTPGKVPIMPASPPSQLHQPSGEDAQEGHGSNLYLALQQAVESLE
KAAASCRQQASSLPASTTMLGPEEPSKADEDNLHPLQRLEELVRSWSPVSQEEGLPEQER
IHYKREALSLTEQNASLRSSLKNKEDELAQDQASLQAFQDEKEMLQRQVWELHESLLRLD
LPPAHPLSQDSSMSRSSSPGAEEELWGTQQLQSISSPVISAPLTPELQGLEAQMEQHRRT
IQRLKCFNQMLLGALQTCKGRSEGLSMRLGQREAETTALHLALQYSEQCVEAYGVLLDLR
TVDTRTVPGLQAREGRTESAMAEAQRLLSEEDPTEAGILARVYASPEGSSVDAPTELEVA
ALLQSYIGRLRAHQALVKVSPEPDSKPGLGSSVPREEVIFQAMLGAQPNLELPRLEKTQI
QQELATMREALVDLTLKLQLVKKEKRALELRDAAHRAQGTLYLLLLEQLQWQLGQGRPQD
PLSSGESDSDSDSSCGAWIPGDRDQPAWPGGPRDSEDMLQELTNSLTRIQELQGQLMELQ
SSLEQMAQDERVQRARCLELTSDFCKAHSALVLAFRGAQRKQEQHQQTLDQQIALMAARQ
EEELESLAQVAQVLEDSGILMPWGETSL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggataccaagaactaaggtgcaataaaacaaaggagaaagggcataaagcctttgtg
atgagtgactggacagacagtctggggggaagtcagcagggcctgcctcctctctgtccc
ccacaggccaggcccaagccgatgatgagcagccgagccacccgaccccgaagccggagg
gggagggtgccacccccagtggagctggaccccgtggtggaaagcactgaagaggctgag
gcagtgggaagcagtgttgggccagagcaggcacccaggctgcctccggaagagtcacca
gcagagcccctggtcaccagtgctgaaaagagccacggaggccactgccaacggctggac
agacacagggatgagcagacagaagcctcagagcccagcaatagtctgactcctggaaag
gtgcccataatgcctgcctcacccccttctcagctccaccagccctcaggggaagatgcc
caggaaggtcatggctccaacctgtacctggccttgcagcaagctgttgagtccttagag
aaggcggcagcttcctgtcgccaacaggcctccagcctcccagcctcgacaacaatgcta
ggcccagaggagccaagcaaggctgatgaggataacctccatcctctgcaaagactggag
gagttggtcaggagctggagccctgtcagccaagaggaagggttgcctgagcaggagagg
atccactacaaacgggaggccctgagtctgactgagcagaatgccagccttcggagttct
ctgaaaaacaaggaagacgagttggcccaggatcaggcctccctacaggcctttcaagat
gaaaaggagatgctacagagacaggtttgggagctgcatgaatctctgctgagactagac
ctgcctccagcacacccccttagccaggatagctccatgagcagatccagcagcccagga
gcagaggaagagctctggggaacccagcaactacaaagtatttccagccctgtaatctct
gcacccctcacgccagagctgcagggcctggaggcccaaatggaacaacacaggaggact
atccagaggctaaaatgcttcaaccagatgctgctgggggccctgcaaacttgcaagggc
cgctcggaggggctgagcatgcggctaggacagagggaagctgagactactgccctgcat
ctagccttacaatacagtgagcagtgtgtggaagcctatggggtgctgttggatttacgg
acagttgacaccagaaccgtgccaggcctgcaggccagagaaggcagaacagagtcagcc
atggcagaggcacagagacttttgtctgaggaagatcctacagaggctggcatcttggct
cgtgtctatgcaagccccgagggcagcagtgtagatgcacccacagagctggaggtggca
gcactcctacagagttacattgggaggctccgggctcaccaagccctggtgaaggtgtct
cccgagccagactccaaaccaggccttggatctagtgtgcctcgggaagaagtcatcttc
caggccatgctgggggctcagcccaacctggagctgccaaggctggaaaagacccagatt
cagcaagagttggccactatgagggaagccctggtggacttgacactgaagctgcagctg
gtgaagaaggagaagcgggcactagagctaagagacgcagcccaccgggcacagggcacc
ctctacctcctgctcctagagcagctgcagtggcaactgggccagggcaggccccaagat
cccctcagctcgggggaaagtgacagtgacagcgatagcagctgtggagcatggattccc
ggagacagggaccagccagcctggccggggggaccccgggactcagaggatatgctgcaa
gaactcactaattccttgactcggatccaggagctacaaggacagctaatggagctacag
tcttcactggaacagatggcccaggatgagcgagtccagcgagcccggtgcttggaactt
accagtgatttctgcaaggcccacagtgccctggtactggccttcaggggggcccagcgg
aagcaggagcaacatcagcagaccctggaccagcagatagcactgatggcagcccgtcag
gaggaggagctagagtccctggcccaagttgcccaagttctggaggactctggaatcctc
atgccctggggagagacttctctctag
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