Gracilinanus agilis (agile gracile opossum): 123232373
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Entry
123232373 CDS
T07702
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123232373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123232373
Spliceosome [BR:
gas03041
]
Complex B
Other components
Prp19-related factors
123232373
Complex C
123232373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
123232373
NCBI-ProteinID:
XP_044514736
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Position
1:759387313..759388575
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AA seq
420 aa
AA seq
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MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLGYGLPIQVRDAGLSFKDDIPKSDVNKEYYMQN
VEREISNSDGTRPVGVLGKATATSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLALQNIKNRYYGINDPVADKLLKRASTMPCLDPPDDKTITTLYVGGLG
DTVSETDLRKHFYQFGEIQTITVVQIQQCAFIQFATRQAAEMAAEKSFNKLIINGQRLNV
KWGRSQAARGKEKEKEGTTASGIKLEPVPGLPGVLPPPPAIEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRIPGPIHYPSQDPQRMGAHAGKYSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatctctgggctccaacacctacaacaggcagaactgggaggactcggacttc
cctattctgtgtcagacgtgccttggagaaaatccctacattcggatgaccaaagaaaag
tatggaaaagaatgcaaaatttgtgccaggccattcacagtgttccgctggtgccctggt
gttcgcatgcgttttaagaagaccgaagtgtgccaaacctgcagcaagctaaaaaatgtg
tgtcagacctgccttttggacctaggatatggcttacctattcaggtccgtgatgcagga
ctgtcctttaaagatgacataccgaagtctgatgtaaacaaagaatactatatgcagaat
gtcgagcgagagatttctaactctgatggaacccgaccagttggtgttcttgggaaggct
acagctaccagtgacatgctgctcaaattggctcggaccaccccttactacaaacggaat
cgtcctcatatttgttccttctgggtgaaaggagaatgtaaaaggggagaggagtgtcca
tatagacacgagaagcctacagatcctgatgatcctcttgctcttcagaatatcaaaaat
cgatattatggcattaatgatcctgtggctgacaagcttttgaagagggcttcaacaatg
ccgtgtctggaccccccagatgataagaccatcaccacactatatgttgggggtcttgga
gatacagtcagtgagacagatctcagaaaacatttttaccagtttggtgaaatccaaaca
ataacagttgtacagatacagcagtgtgctttcatccagtttgccacaaggcaagctgca
gagatggctgctgagaagtcctttaacaaattgatcataaatgggcaaaggcttaatgtg
aaatggggaagatcccaggcagccagaggaaaagaaaaggaaaaagaaggaaccacagcc
tctggaattaagctggagcctgttccaggacttcctggagttcttcctcctcctccagca
attgaagaagaagcctctgccaattattttaatctccctcccagtggtcctccagcagtg
gttaatattgccctgcccccacctcctggaattgcacctccacccccaccaggttttgga
ccacacatgttccacccaatgggaccacctcctcccttcatgcgaattccaggccccatc
cactatccttcccaggatccccagaggatgggagctcatgcaggaaaatatagcagtccc
taa
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