Gracilinanus agilis (agile gracile opossum): 123233029
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Entry
123233029 CDS
T07702
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gas03009
]
123233029 (DDX21)
03036 Chromosome and associated proteins [BR:
gas03036
]
123233029 (DDX21)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123233029 (DDX21)
Ribosome biogenesis [BR:
gas03009
]
Eukaryotic type
Pre-60S particles
Helicases
123233029 (DDX21)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123233029 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123233029
NCBI-ProteinID:
XP_044515126
LinkDB
All DBs
Position
2:complement(699653142..699677001)
Genome browser
AA seq
873 aa
AA seq
DB search
MPGKLLSEAEVESEAVMEAAEQTRKHKHKKDKKEKSKNDKLEKEPQVETEELDSPKPKKV
KKGEEVISPKPKKAKKKEQLPEDEEDFSPKPKKAKKSEEGSVDEPKSLKERGGASTDEVC
SKAKKTKKKEEPSEIESPLKPKKAKKKEREVNGDTGEKTPKLEKVKVSNGLSHSKQASDS
EESSEESHSEEEQENHLPKGLESHTLSSKGLKSQLPAGLTEQVKEEEEDEDEDEDDDDDD
DDDDDEDEDQELEKPKKDKKKENEKDSKAEDTEELSAEQKEGAFSNFPISEETIQLLKAR
GVTYLFPIQAKTFHHVSSGKDLIAQARTGTGKTFSFAIPLIEKLQGDTQPRARGRAPKIL
VLAPTRELSIQVSKDFSDITKKLTVACFYGGTPYNGQIDLIRRGIDILVGTPGRIKDHLQ
NGRLDLTKVQHVVLDEVDQMLDMGFAEQVEEILTVAYKKDSEDNPQTLLFSATCPHWVYD
VAKKYMKSTYEQVDLIGKKTQKAAVTVEHLAINCHWSQRAAVIGDVIQVYSGSHGRTIIF
CETKKEAQELSLNESIKQDAQSLHGDIPQKQREITLQGFRNGKFGVLVATNVAARGLDIP
EVDLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQKKEQHQLAQVERQAGITFKRVG
VPSASEIIKASSKDAIRFLDSVPPAAINNFRQTAQKLIDEKGAVEALAAALAHISGATTV
EQRSLINSDVGFVTMVLQCSIEMHNIGYAWRGLKEQLGEEIDDKVTRMTFLKGKTGVCFD
VPAAEVKSFQDHWQDSRRWQLSVATERPELEQQPDEGRGFSNFRSGGGRGGRGGGRGGGG
RGGRSGGFGGFNRNDKFQNRGQKRSFQRAFSHR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaagcttctctcagaagccgaggtcgaatcagaggcggtcatggaggcggcg
gagcagacgcggaaacataagcataagaaagataaaaaagagaaatcaaaaaatgataaa
ctggaaaaggagccccaggtagagactgaggagcttgactcacctaagcccaaaaaggtg
aaaaagggggaagaagtcatttctccaaagcctaaaaaggccaagaagaaagaacaactc
ccagaggatgaggaagacttttcccctaaaccaaaaaaggccaaaaagagtgaggaaggg
tctgtggatgagcccaaaagcctgaaagagagagggggcgcttctacagatgaggtctgc
tctaaggccaaaaagaccaaaaagaaagaggagccttctgaaattgaaagccccctgaag
cccaagaaagccaagaagaaggaaagagaagtaaatggagacactggagagaaaacacca
aaactggagaaggtgaaagtaagtaacggattgtcccactccaaacaggcatctgattct
gaggagtccagtgaagaaagtcacagtgaggaggagcaggaaaatcatcttcctaaagga
ttagaaagccacacccttagttctaaaggattaaaatcccagttgccagctggactaaca
gaacaagtcaaagaagaagaagaggatgaggatgaggatgaggatgatgatgatgatgat
gatgatgatgatgatgaagatgaagaccaagagttggagaaacccaaaaaagacaaaaag
aaggaaaatgagaaagattctaaagctgaagacactgaggagttatctgcagagcagaaa
gaaggtgctttctctaatttccccatctctgaagaaacgattcaactcctcaaagcccga
ggagtgacctacctgtttcctatacaagcaaaaacatttcatcatgtgtccagtggaaag
gacttaatcgctcaagcccggacaggaacagggaagacattctcttttgccatcccctta
attgaaaaacttcagggagacactcagccccgagcaagaggccgtgcaccaaagatcctg
gtcctcgcccctacaagggaactgtcaatccaagtcagcaaagacttcagtgacatcacc
aagaagttgacagtggcttgtttctatggcggaacgccctataatggccagatcgatctc
attcggagagggattgacatcttggtgggcaccccaggccgcatcaaagaccatctgcag
aatggccggctggacctcaccaaggtgcagcatgttgtgctggatgaagtggaccagatg
ttggacatgggctttgctgagcaggtggaagaaattttaactgtggcttataagaaagat
tcagaagacaatccccagacattgcttttttctgctacttgtcctcactgggtgtatgat
gtggccaagaaatacatgaaatccacttatgagcaagttgaccttattgggaagaagacg
cagaaagctgcggtgactgtggagcatttggccatcaactgccattggtctcagagggca
gcagtcattggtgatgtcatccaggtctatagcgggagtcatggacggaccattattttc
tgtgagacaaagaaggaagctcaggagctctccttgaatgaatcaataaagcaggatgcc
cagtcattgcatggagatattccacagaaacaaagggaaattacccttcagggttttcgg
aatggtaaatttggtgtcctggtggcaaccaatgtggctgctcggggtttagacatacct
gaggttgatctggttatacagagttctcctccaaaggatgtagagtcctacattcatcgt
tctgggcgtacaggccgagccggacggactgggatctgcatttgcttttatcagaagaag
gagcagcaccaactggcacaggtggagcggcaggcggggatcacattcaagcgtgtgggt
gttcctagtgcttctgaaataattaaagcctccagtaaagatgctatcaggtttttggat
tcggtaccccctgcggccattaacaacttcaggcagacggctcagaaattgattgatgaa
aagggggctgtggaagccctggctgcggcattagcccatatctcaggggcgaccactgta
gaacagcgttccctgattaactcagatgtgggctttgtgacaatggttttgcagtgctcc
atagagatgcacaacattggatatgcttggagggggctcaaagagcagctgggggaagag
attgacgacaaagtgacccgaatgaccttcctcaaggggaagacgggtgtttgctttgat
gtccctgctgcagaagtaaaatcattccaggaccactggcaggactcgaggcgctggcag
ctctctgtggccacagagagacctgagctggaacagcagcccgatgaaggcaggggcttc
tctaatttccggagcggtggtggccgtggtggccgaggcggcggccgaggtggtggtggc
cgaggtggccggagcggtggttttggtggcttcaacaggaatgacaaatttcaaaacaga
ggccagaagcgaagttttcagagagcgttttctcaccgttag
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