Gracilinanus agilis (agile gracile opossum): 123233122
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Entry
123233122 CDS
T07702
Symbol
ALMS1
Name
(RefSeq) Alstrom syndrome protein 1
KO
K16741
alstrom syndrome protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123233122 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123233122 (ALMS1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
123233122 (ALMS1)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123233122 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
123233122
NCBI-ProteinID:
XP_044515225
LinkDB
All DBs
Position
2:30853116..30958529
Genome browser
AA seq
1789 aa
AA seq
DB search
MSLGEVLQPRALNAVLKDDSNTRSPTLSETGIITSERVTELLRAEKYNMSDVPEPSRAGA
FQSSHDSARDSKLHLAFMGQFREGALDYTVPPSSLSQADFYPTTSCTSSKPGPVEPLSSK
AENREYQDGTSQTVPDIQDHTSQTSPEVSQTLLSKTTVRHHHFIEPHPCIPVIPCVPPVP
CVPPVPCIPSVAALGPRLLCPNTLRIFYKNPRTSPYVHSSINSGRSHVGQPIVEFPSCRD
SVVPTETSWRLDSQKKTVSVVESMPPKQEEQASSSESAPGDFPKSEQAKKRSVPLRIPST
TFYYKEDLKIVSERVQRLIDRWDSELIEISAHTAPKPTLKTVGTSKETTKLTFFDSKEIP
VSEYESKTDKGLHSLLVEAENNARKRFSNASALRADTMSPWPSRLEESKEPSLKKDSAGL
SQRSTRDETLVSTGKVETSALTYFPSQRESGRTSVEEMESKARVAMRETLRQYENARSVP
RCESGRSGAFTGHKFPVPLMPFVGNHSSSDFNDGRVSYVWDPFLGYLPAIPSHEYMGDVR
DLSDSDEGCSSDDSLAAHVEHILKCESPVSFATQVLRSAEEEECRVRARAWNLKFNLASK
YGDFMADLDEEDMRKMEEIKASLFGCERPLDMIQGLPCPVGMRNIPETFCNHLFIEAHEK
GCFRTMANDQSDNPSRGFRSKETAESQPPFSQPPLSQPPLSQPPLSQHHGRFVAEQGQLK
PNTRRVADMEAEADFRVRPSSPPLDGEVSSSFPCSSSKRAISYLRITLSPNPCSGTLNGE
TFLKRQHTMDAGTRTRLQNSLSVATRPSKPCLPMPMLLCPPESTLPLPDKEFLDCLPHRN
GQPLKSFSRQTQVNCSDLEAHSHSKGVPNTDNCVTFDNSRNAYPASSLKLSSDANTQITT
TEGSEKTTISSEIFISSHIPNKPSHGPTAQPSLLPYKPSGSATMYYVPNSAEPLPYPVAK
SDTTVESTHSGSNDAIAPDFPPEALGTRDENVSDIVNIKHKEGIYSKKTASKSAWTEEEN
PTPKSGAESKNQLEAENTTHSVFKSAQFYFHHPVHHHDFLSCCEPWGRGAQLLHSRGVPG
LCPPFEDNSGFYPLQTEMDYTRIESYCVNVGGSEVRGAQQRLDKSHEVRVPPGSPRISFS
LAPTLQPSASLNELWNRFQERHKQQKLPASNSSKELSLVDRLDRLAKVLQKPVMLSLQAS
RSAQADGSGEGTWQQQPQPKKDGDEPLSPCALRWVSRASFVLASGHQNKAGHPREPGANS
VSPVSSDSRVHEPMDAMFESDLTQTDGEADPLGEVSSDASVTQKVLDRKHGSPRRQHRQM
EGSRRGTKSRPTALQVRRKGVQVDSVTSLDSGSTDSSSWSIHTTPRNKQNVRMLNKAVQT
GELEIVRNTRKHTQDFGVTFPTPNYNATDKRADNYVNYSGPGSSSEEKKPLTLHLWTKKP
RKSKPNCCEAAETFDNVMRVFRLLVALSVLTFGLTSQFLEGQEGLELQEKLDGFLTQAAL
KAPSAISLTIVFTSTLHLSQRVTWGDLDPPFPRPTGPAHRPWTPQLSGFLPLATTSAAAA
SPPIFTCCCLLTTGDISLGVSWFIPAENLRCASKKENQASGVSGPGPSWFASLTYNKPWR
QPLREKNGQTESRVSCRLQAMSPDLDDEEAQRRFVKAGLQECLERNRPDFISNSGARVKR
LKLITEERKLQHLLQRERDALFNTAEQQKESQDFACFLSKKGQVTLRSRTITKKEMVQRS
KRMYEQLPEVRKKREEEQRRSAYTTYRVKAQLYKMKITNRVLGRKIPWD
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaggtgaagtgctccagcctcgggccctgaatgcagttctaaaggatgacagt
aataccagaagtccgaccctcagtgaaactggcatcataactagtgaaagagtgaccgaa
ctgctcagggcagagaagtacaacatgagtgatgtgccggagccctccagagctggagct
ttccagagcagccacgacagtgccagggactccaaactccatctggctttcatgggccag
ttcagagaaggggctttggattacactgttcctccttcgtctctctcccaggctgacttc
tacccgaccacgtcctgcacatcctctaagccaggccctgtggagccgctgtcctccaag
gcagagaaccgagagtaccaggatggcacttcccagacggtgcctgacatccaagaccac
acttcccaaacgtctcctgaggtgtcccagacactgctgtctaagaccacggtccgccac
catcatttcattgagccgcatccgtgtattcctgtaatcccgtgtgttcctccggttccg
tgtgttcctccagttccatgcattccttcagtagcagccttaggacctcgcttactgtgt
cccaatacgctgaggatattttataagaacccaaggacatctccctacgtacattccagc
attaactctggcagatctcacgtgggccagcccattgtggagttcccgtcatgccgtgat
tctgtagtacccactgaaacttcgtggcgtctggattctcagaagaaaacggtcagtgtg
gttgagagtatgcccccgaagcaggaggagcaggcctccagctcggagagtgcccctggt
gacttccccaagtctgagcaagctaagaagaggtcggtgcccctaaggattccttccaca
actttctattataaggaggatttaaaaattgtttctgaacgtgtccaaaggctcatcgac
cgttgggattcagagctcattgagatcagtgcccacactgcccctaagcctaccctgaag
actgtggggactagcaaggagacgaccaagctcaccttttttgacagtaaggagatacct
gtatcagaatacgaatccaaaacagacaaagggctccactctctcttggtggaggcggag
aacaatgcgcggaagcgattcagcaacgcctcagctcttcgagctgacaccatgtctcct
tggcccagcaggctggaggaatccaaggaaccctctttgaagaaggactcggcgggcctt
tcccagaggtcaacgagggacgaaaccctggtctccactgggaaggtggagacaagtgcc
ctcacatatttcccttctcagagagagtctgggagaacttctgttgaggaaatggagagt
aaggcccgagtggccatgagggagaccctcagacagtatgaaaacgcccggtcggtgccg
aggtgtgagtcgggcagaagtggtgccttcactgggcataaatttccagtgcctttgatg
ccttttgtaggcaatcattcaagtagcgatttcaatgatgggagagtttcctatgtctgg
gacccctttttggggtacctgcccgccatccccagccatgagtacatgggagatgtccgg
gatctgtctgatagtgatgaaggctgtagcagcgatgactccttggctgcccacgtggag
catattctcaagtgcgagtcccctgtgagctttgccacgcaggtgctgcggagtgcagag
gaagaggagtgcagagtccgcgcacgtgcctggaacctcaagtttaacctggcttccaag
tacggagacttcatggcagatctggatgaagaggacatgaggaagatggaggagatcaag
gccagcctgtttggctgtgagaggccgctggacatgatccagggtttgccgtgcccggtg
gggatgagaaatatccctgaaacattttgtaatcatctctttattgaagctcatgaaaaa
ggctgcttcagaactatggctaatgaccaatctgacaacccttctcgtggcttcagatct
aaggagactgcagagtcccagcctcctttttcccagccacctctttcccagcctcccctt
tcccagcctcccctttcccagcatcatggccgtttcgtggcagaacagggtcagctgaag
ccaaacacacgtcgtgtagcagacatggaggcagaggcggacttcagagtacgtccaagc
tccccacctctagacggagaagtgtcttcttcgtttccatgctcttcaagcaaaagggcc
atctcttatcttcggattacgctctcccccaatccttgcagtggcacgctgaatggggag
actttcctgaaaaggcagcacacgatggatgctggcactagaacaagacttcagaattca
ctgagtgtggccacacgtccctcaaagccttgcttgcctatgcctatgctgctgtgccct
ccagaatcgaccttaccgctaccagataaagagttcttagattgtctacctcacaggaac
ggccagcctttgaaatccttttcaaggcaaacccaagttaattgttcagatttggaggct
cactcacattcgaaaggagtcccgaacactgataactgtgtaacattcgataactccagg
aatgcatatcctgcctcttctctcaagttgtcatcggatgccaacactcagataacaaca
actgagggttcagaaaagaccacaatttcatcagagatttttattagttctcacatccct
aacaagccatctcatggcccaactgcccagccttcactgctgccatataagccttctgga
agcgccaccatgtattacgttccaaactcagcggagccactcccgtaccctgtggccaaa
tccgataccactgtggagagcacccactcaggctccaatgatgctattgctccagatttc
ccccctgaggctcttggcacaagggatgaaaatgtgtccgacattgtaaacatcaaacat
aaagagggaatctatagcaagaagactgcatctaagtcagcctggactgaagaagaaaat
cccactccaaaaagtggggcagaatctaagaatcagttggaagctgaaaacacaactcat
tctgtcttcaagtcggcccagttttactttcaccatccggtgcaccatcatgatttcctc
tcctgctgcgagccctggggaaggggcgctcagctgcttcactccagaggagtccccgga
ctctgtccgccttttgaagacaacagtgggttctacccgttacagactgaaatggattac
accagaatagaaagttactgtgtgaatgtagggggctctgaagtgcggggggcccagcag
cggctcgataagagtcatgaagtcagggttcccccagggagcccaaggatcagcttctcg
ctggccccgacgctccagcccagcgcaagtctgaatgagctctggaacaggtttcaggag
cgacacaagcagcagaaactgccggcttccaactcctccaaagagttgtccttggttgac
cgtctagatcgcctggccaaggttcttcagaagcccgtgatgctttctctgcaggcttcc
aggtctgcccaggctgatggcagcggggagggcacctggcagcagcaaccccagccaaag
aaggatggagatgagcccctctctccctgcgcattgagatgggtctcccgggcttcattt
gtcttggccagtggtcatcagaacaaggccggccatcccagagagccaggggccaattct
gtgagccccgtctcttcagactcacgtgtgcatgagcccatggatgccatgtttgagtct
gacttgacccaaactgatggagaagcagacccgctaggtgaggtgagcagtgatgcatcc
gtgactcagaaagtcctagataggaagcatggatcccccagacggcagcacaggcagatg
gaggggagcaggagaggaacgaagtcccgaccaaccgcccttcaggtcagaagaaaaggc
gttcaggtggattccgtcacttccttggactcgggctcgactgacagtagttcttggagt
atacacactactcccaggaataagcagaatgtccggatgttaaataaggctgttcaaaca
ggggaattggagattgtgagaaatacaaggaagcatactcaggattttggggtgactttt
ccaaccccaaattataatgcaactgataagagagcagacaactatgtgaactattcaggg
ccaggaagcagttctgaagaaaagaagcctctgactctgcacctgtggaccaagaagcca
aggaaaagtaaacctaattgttgtgaagctgctgaaacgtttgacaatgtaatgcgtgtt
ttccgtttgttggtggcattaagcgtcctcacctttggcttaacatcacagttcctggaa
gggcaggagggtctggagctccaggaaaagctagatgggttcctgacccaggctgcccta
aaagccccttctgccatatcactaacaattgtatttacgtccaccctgcatttgtcccag
agagtcacctggggggatttagaccctcctttccctaggcccacagggcctgcccatagg
ccctggacaccccaattatctggtttcctaccccttgccaccacctctgctgctgctgcc
tctcctcctatcttcacctgctgctgtttgctcacgactggagatatcagcctaggggtt
tcctggtttattcctgcagaaaacttgcgatgtgcctctaagaaggagaatcaggccagt
ggtgtctctggccccggcccctcctggttcgcctctctgacttacaacaagccctggagg
cagccccttcgagaaaagaacggccagacggagagcagagtgagttgtcgcctccaagcc
atgtcccccgatctcgatgacgaggaggcccagagacgatttgtgaaggcgggcctgcag
gagtgcctggagaggaaccgtcccgacttcatctccaactctggagcccgggtgaagcgg
ctgaagttaatcacggaggagagaaaactgcagcatttgttacaaagggagcgggatgcc
ttgttcaacacggcggagcagcagaaggagtcccaggattttgcctgctttctctccaag
aaaggtcaggtgactttgaggagcaggacaattaccaagaaggaaatggtgcaacgctcg
aaaaggatgtatgagcagcttcctgaggtgaggaagaagagggaagaagagcagaggagg
tcggcctacactacctaccgcgttaaggctcagctctacaaaatgaaaatcaccaaccgt
gtcttagggagaaaaatcccctgggactga
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