Gracilinanus agilis (agile gracile opossum): 123234263
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Entry
123234263 CDS
T07702
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gas01002
]
123234263 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123234263 (USP42)
Enzymes [BR:
gas01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123234263 (USP42)
Peptidases and inhibitors [BR:
gas01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123234263 (USP42)
Ubiquitin system [BR:
gas04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123234263 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
123234263
NCBI-ProteinID:
XP_044516123
LinkDB
All DBs
Position
1:219953403..219998942
Genome browser
AA seq
1400 aa
AA seq
DB search
MTIVDKVSESSNPSACQNQPGSSVAPSLGDMDSGSASWGAVSSLTDIPKHKISLGPVPGA
AIYSNSSISDKPKPSAQKDQSTGDGIAPPQKVLFPAEKICLKWQQSHRVGAGLQNLGNTC
FVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNPGNVIKPMPVI
NDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRHSQATTLVCQIFGGYLRS
RVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGE
HTHSIHTPGQSSPRPVINQRVVSSKQTVSGFIGPQLPPHMIKSSNHLNGTGPLKETPSCS
VASASSSNLNRASPAPASTSIQNWTVNRPSIIPEPPKKQKITISIHNKLPVRQGQSQPNL
HNSSLENLSKSIPSSTITNSSALQSTSNASTMSVATKVSKQITPSESCSKPVMNGKSKLT
SSVLVPYGAESSEESDEESKGLGKENGHAKPLNGLLTGNGVGMLPNTCSSCQDAEDDEAS
HHELPETVTVNGANSIENSDPKENGLSFDDPTCQVKPAKHSENPFSKTNGLHGKLMPTPL
PPLPEDRIVESFRFSNKLKSLTDDISSPGNEKPPEEEHGTELVVGSNSSASFEQLEKVTS
SLSCKIKNNFPPSDPNVIATKEEIPESIIAKTEESIPNVISYCNANKKAIGDDQFPKQCD
PGNFTDEKLLLPQEVKGTLKENSLNSAPVDTVEKLSQTPSNNFDTECDSNKLLVFISTEK
CKETKDLSKSIDMSANELSTTQLDKIVENHYSRGSTEQSNSERCEENKVRQKVQSNSPVK
EKGDSPRKVDRGHHHNRRDHSSSGERTKQSRSKTETHYYKKRVSYSKERTKKGRHKSEHC
NGSKYKPFHNENSSPDSRSLGKHNHYRSRSRGKSDQERGRYYHSKSERSWSREKYYPDGM
RRWDKYRYYSDYYPYSSREGREWKPSHSDREYDKASQYNSRSHKDYYKSKWVHEPAPKEK
ERHHLNSNKVDLSHCSSLPQHPEKYSHDKIALENSSNLCSQFHEYEIVKMRKRKYDSIEN
SDSDIEKKIPKPLQNEPVEEQKVKKHKKSKKKKKSKDKHRARSCKHHQDLDLSVANSKAD
LRKHKKKKKKKKKHAKKSEDYIEHSDLHVLKTSCSETDIKTWEKKDKSPIKDGLPSEDYQ
KSNKLSHEEDDDHPEKTKHLRMESQDHKCHPAEYGQAKDLPSHKDYSQKVSSKQLDDSST
STDESRWKVNENSSSKEKIH
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaagtatctgaatcttccaacccatcagcttgtcagaatcaacct
ggcagctcagtggcaccttcacttggagacatggactcaggctctgcaagttggggagct
gtatcttctttgacagacatccccaaacataaaatttctttaggaccagtacctggtgct
gcaatatattctaattcatctatatctgacaaaccaaagccatcagcacagaaagatcaa
tctacaggtgatggcattgcacctccacagaaggtcctttttccagctgaaaaaatttgt
ctaaagtggcaacaatctcacagagttggagctgggctccaaaatctgggcaatacgtgt
ttcgtcaatgctgcattgcagtgtttaacatatacgccacctcttgccaattatatgtta
tctcatgaacactccaaaatatgccatgagcaaggattctgtatgatgtgtaccatgcag
gcccatattacccaggcactcaataatcctggtaatgtcatcaaaccaatgccagtcatc
aatgatcttcgacgtatagctaaacacttccgttttggaaaccaggaagatgcccatgaa
tttcttcgatatactgttgatgcaatgcagaaagcatgcctgaatggcagcactaaattg
gaccggcactcccaagctaccactcttgtttgtcaaatatttggaggctacctgagatct
cgagtaaagtgtatgaactgcaaaggagtttctgataccttcgatccataccttgatatt
ccactggaaataaaggctgcccagagtgtcaacaaggccttggaacagtttgtgaagcct
gagcaattagatggagaaaattcctataaatgtagcaagtgtaaaaagatggttccagct
tcaaagaggtttactatacatagatcatctaatgttcttaccttatctttgaaacgtttt
gcaaatttcagtggtggaaaaattgccaaggatgtgaaatatcctgagtatcttgatatt
cgaccatatatgtctcaacctaatggagaaccaattatttatgttctatatgcagtgtta
gtgcatacgggttttagttgtcatgctggtcattactactgttacataaaggctagtaat
ggacagtggtaccagatgaatgattccattgtttctaccagtgacatcagatcagtgctt
aatcagcaggcttatgtcctcttttatatcaggtcccatgatgtgaaaaatggaggtgaa
cacactcattccattcatactccaggacagtcttctcctcgaccagtgatcaatcaacgg
gtagtcagtagtaaacagactgtatcaggctttattggaccacagcttcctcctcatatg
ataaagagttctaatcacttaaatgggactggaccattgaaagaaactccaagttgttct
gtggcaagtgctagtagttctaatttaaacagagcaagtcctgctcctgcttcaacttct
attcaaaactggacagttaacagaccttcaattattcctgagcctcctaagaagcaaaaa
attactatcagtattcataacaagttgcctgttcgacaaggtcagtctcaacctaatctt
cacaacagttctttagaaaacctcagcaagtccattccctcatctaccattactaattct
tctgcattacaatctacctcaaatgcatcgacaatgtcagttgctactaaagtatcaaaa
cagatcacacctagtgaatcttgttccaagccagtaatgaatggcaagtccaagctcacc
tccagtgtgctggtcccttatggtgcagagtcttcagaagaatctgatgaggagtcaaag
ggactgggtaaggagaatggccatgcaaaacctcttaatggactactgactggaaatgga
gttggtatgctcccaaacacttgttcttcctgtcaagatgctgaagatgatgaggcttct
catcatgaactgccagaaactgtgacagtaaatggtgctaatagtatagagaatagtgac
cctaaagaaaatggactgtcatttgatgatcccacttgccaagtcaaacctgctaaacat
tcagaaaatcccttttccaagacaaatggattacatggaaagttgatgcctactcccttg
cctccacttccagaagatagaatcgtagagtctttcagattcagcaacaaattaaaaagc
ttgactgatgatataagttcacctggaaatgagaaaccacctgaagaagaacatggtaca
gaacttgtggttggtagcaacagttcagcttcctttgaacaactagagaaagttacttca
agtcttagctgcaaaataaagaataactttccaccctcagatcctaatgtcattgctacc
aaagaagaaattcctgaaagtattatagcaaaaacagaagagtctattcctaatgtcatt
agttattgtaatgctaacaagaaagccattggagatgatcagtttcccaaacagtgtgat
cctgggaatttcacagatgaaaagctcctattaccccaagaagtaaagggaacattaaag
gagaattcactgaactctgcaccagtggacacagtggaaaaattgagccaaactccctca
aataattttgacactgaatgtgatagtaataaactcttagtatttattagtactgaaaaa
tgcaaagaaacaaaggacctttctaaaagtatagacatgtctgctaatgaactgtctacc
actcagttagataaaattgtagagaatcattattcaagagggagtactgaacaaagtaat
agtgaacgatgtgaagaaaataaagttagacaaaaagttcagagtaattctccagttaag
gaaaaaggtgatagcccaagaaaagtggacagagggcatcaccataaccgaagagatcat
tcttccagtggagaacgaacaaagcaaagcaggagcaaaacagagacccattattacaaa
aaaagagtctcctatagcaaagagaggaccaaaaagggccgccacaaatcagaacactgt
aatggaagcaaatataaaccttttcataatgaaaacagtagccctgacagtagatcctta
ggaaaacataaccattatcggtccagaagtagaggaaaatctgatcaggaaaggggtaga
tattatcattctaaaagtgaacgatcttggagtcgggagaaatattatccagatggaatg
agaagatgggacaaatatagatattatagtgattattatccttattcttcaagggagggt
agagagtggaagccatctcacagtgatcgggaatatgacaaagcaagtcagtacaatagt
agatcacacaaggactattataaaagcaaatgggttcatgagccagcacctaaagagaaa
gaaaggcatcacttgaacagtaataaagtagacctttcccattgttcatctcttcctcaa
catcctgaaaaatattctcatgacaaaattgcacttgaaaacagttcaaatctttgtagt
caatttcatgaatatgaaattgtgaaaatgaggaaaaggaaatatgatagcatagaaaat
agtgacagtgacatagaaaagaaaatccccaaacccttgcaaaatgagccagtagaagag
cagaaagtaaagaagcacaaaaaatcgaaaaagaaaaagaaatccaaagacaaacataga
gcaagaagctgcaagcatcatcaggatttggatctttctgtagccaactccaaagctgac
cttcgcaaacacaaaaagaagaagaagaaaaagaagaaacatgcaaaaaaatcagaggac
tatattgaacattcagatcttcatgtactcaaaacttcctgctctgagactgatatcaaa
acttgggagaaaaaggacaaatctcccatcaaagatggcttgccatctgaggactaccag
aaatctaataaactttctcatgaggaagatgatgatcaccctgagaaaaccaaacactta
agaatggaaagccaggatcataaatgtcacccagctgagtatggccaggctaaagacctc
ccctctcataaggactacagtcagaaggtttccagtaaacagttggatgacagttctaca
agtacagatgaatctagatggaaagtgaatgaaaactcatcctcaaaagaaaaaatacac
tag
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