Gracilinanus agilis (agile gracile opossum): 123234481
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Entry
123234481 CDS
T07702
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123234481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123234481
Spliceosome [BR:
gas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123234481
Complex C
U4/U6.U5 tri-SnRNP related factors
123234481
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
123234481
NCBI-ProteinID:
XP_044516315
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All DBs
Position
2:18467934..18468875
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AA seq
313 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRSIGGV
YDSNIKPTPFLCLTLKMLQIQPEKDIIVELIRNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNQNGEFELMHVDEFIDELLHSERVCGIILPRLQKRYVLEEDEQLKPQ
VSALAEDMEDVESSEEEEEDVNDKLERTPSLDHCQRRYRDLDKPHPSPKLRYRQSRSQSP
QRCSWSFKRRSPSPCQERHHSKRPRRHRSQSRERLYYSQSKSLRHRRSHRHRRHSKSPKR
SKKSHKKSRRGNK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggatgctcacagcatccatggcaccaatccgcagtacctg
gtggaaaagatcatccgaacccgaatctatgaatccaagtactggaaggaggagtgcttt
gggctcacagctgagcttgttgtggataaagccatggaattgaggtccataggtggtgtc
tatgacagcaacatcaagccaactcctttcctgtgtctgaccttgaaaatgttgcaaata
caaccagagaaggacatcatagtggaattaatcagaaatgaggatttcaaatatgtccgc
atgttgggggccctatacatgaggctgacgggcactgccattgactgctacaaatatcta
gaacctctttataatgactatcggaaaattaagagccagaaccaaaatggagaatttgag
ttgatgcacgtggatgagtttattgatgagctactacacagtgagcgggtttgtggcatc
atcttgcccaggcttcagaagcgctatgtgctagaagaagatgagcagctgaagccccaa
gtcagtgccctggcagaggacatggaagatgtggagtccagtgaggaggaagaagaggat
gtcaatgacaaattggagaggaccccatccctggatcactgtcagcgaagataccgtgac
ctggacaagccccatccctccccaaagctgcgctacagacaaagccggagtcaatctccc
cagagatgcagctggtctttcaaaaggaggagtccctccccctgtcaagaaagacatcac
agcaagagaccaagacgccaccgaagccaatcccgagaaaggctctactactcccaatcc
aaatctctacgccatcgtcggagccacagacacaggagacactcaaagtcacctaaaagg
tcaaagaaaagccacaagaagagccggcgggggaacaagtaa
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