Gracilinanus agilis (agile gracile opossum): 123234704
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Entry
123234704 CDS
T07702
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas01524
Platinum drug resistance
gas03430
Mismatch repair
gas05200
Pathways in cancer
gas05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
123234704 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123234704 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
123234704 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
123234704 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gas03400
]
123234704 (MSH2)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
123234704 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
123234704
NCBI-ProteinID:
XP_044516591
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Position
2:96087132..96162498
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AA seq
934 aa
AA seq
DB search
MAVQPKEVLAMDSQAECSFVRFFQAMPTKPLTTVRLFDRGDYYTAHGEDALLAAREVFKT
QAVIKYIGVTGSKKLESVVLSKMNFESFSKDLLLVRQYRVEVYKNKAGNKATKENDWHVA
FKASPGNLSQFEEILFGNNDMSCSIGGVGVKLSIVDGQRLVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECILPGGETAGDMGKLRQVIERGGILITERKKVDFSAKDIVQD
LNRLLKSKKGDQMNSAVLPEMENQVAISSLSAVIKYLELLSDDSNFGQFELTTFDLSQYM
KLDNAAVRALNLFQGSAEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNRIEERL
NLVEAFVVDAELRQSLQEDLLRRFPDLHRFAKKFQRHAASLQDCYRMYQAINQLPNVIKA
LEKHEGTHQMLLLAVFITPLTDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLTQ
LRESIDNLEKKMQTALTNAARELGIEAGKHIKLDSNAQIGYYFRVTCKEEKVLRSNKNFN
TLDVQKNGVKFTNSKLAAFNDEYLKIRDEYEEAQDAIVKEIINISSGYVEPMQTLNDVLA
QLDAVVSFAHVANGAPIPYVRPVILEKGQGKIILKGSRHACVEVQDEVAFIPNDINFEKN
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDCQMK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQLPTVNNLHVSALTTDEALTMLYQVKKGVCDQSFGIHVAELANFPKHV
IENAKQKALELEEFQHFGKPQGSDEMEPAAKRCYHEREQGEKIIQTFLAKVKELPFAEMS
EDGIRTKLKQLKAEVISQNNSFVNEIISRIKVTP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggaggtgttggccatggacagccaggccgaatgcagctttgtc
cgcttctttcaggccatgccgacaaagccgcttaccacagtgcgcctcttcgaccggggc
gattactataccgcgcacggcgaggatgcgctcctggccgcccgggaggtgttcaagacc
caggcagtcatcaaatatatcggggtgacaggttctaaaaaactggaaagtgttgtgctt
agtaaaatgaattttgaatctttttcaaaagacctcctcttggttcgtcagtatagagtt
gaagtttataagaataaagctgggaataaggccaccaaggagaatgactggcatgtggca
ttcaaggcttcaccaggtaacctttcccaatttgaagaaattctctttggcaacaatgac
atgtcatgttccattggtggtgttggtgttaagctgtccattgttgatggccaaagatta
gttggagttgggtatgttgactccatacagaggaagctgggactgtgtgagtttccagat
aatgatcagttctccaatctggaagcactgctgattcaaattggcccaaaggaatgtatc
ctaccaggaggtgaaactgctggggacatgggaaaactgagacaggttattgagagagga
gggattctgatcacagagaggaagaaagttgacttttcagcaaaagatattgttcaggac
ctcaaccgtttgttgaaaagcaaaaagggagatcaaatgaatagtgctgtattgcctgag
atggagaatcaggttgcaatttcatcattatcggctgtgattaagtatttagaactttta
tcagatgattcaaactttggacaatttgaactgaccacctttgacctcagccagtatatg
aagttggataatgcagctgtcagagctcttaatctttttcagggctctgccgaagacaaa
agtggtactcagtctcttgctgcattgctgaataagtgcaaaacacctcaaggccaaaga
ctgcttaatcaatggattaaacagccactactggataagaacaggatagaggaaaggtta
aatctagttgaggcatttgtagtagatgcagagctgaggcagagtttgcaagaagactta
cttcgtcgtttcccagatcttcaccgatttgccaaaaaatttcaaagacatgcagctagc
ctacaggattgttaccgaatgtatcaagccataaatcagctccctaatgttataaaagca
ctggaaaaacatgaaggaacacaccagatgttgttattggcagtctttataactcctctg
actgatcttcattctgatttctccaaatttcaggaaatgatagaaacaaccttagatatg
aatcaggtggaaaaccatgaatttcttgtgaaggcatcctttgatcctcacctgacacag
ctaagggaatcaattgataatctagaaaagaagatgcagacagctttaacaaatgcagca
agagagctaggcatagaagctggtaaacacattaagttggattctaatgcacaaatagga
tattatttccgagtgacttgcaaggaagaaaaagtccttcgtagcaataaaaacttcaac
acattagatgtccagaagaatggtgttaagtttaccaacagtaaattggctgctttcaat
gatgagtacctcaaaattagagatgagtatgaggaagcccaggatgccattgttaaagaa
attatcaacatttcttccggctatgtagaaccaatgcagacactaaatgatgtattagct
caactggatgctgttgtcagttttgctcatgtagcaaatggagcacctattccatatgta
cgtccagtcattttggaaaagggacaaggaaaaatcattttgaaaggttccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcccaatgacattaactttgagaaaaat
aagcagatgttccacattattactggccccaatatgggaggtaaatcaacatatatccgt
caaactggagtaatagttctgatggctcagattggctgttttgtaccatgcgaatccgca
gaagtgtccattgtggattgtatcttggcgcgagtgggagcaggtgattgtcagatgaaa
ggtgtatctacattcatggcagaaatgctagagacagcttctattctcaggtctgcaacc
aaagactccctaataatcatcgacgaattgggaagagggacttctacctatgatggattt
gggttagcctgggctatttcagaatatattgccactaagattggtgccttctgtatgttt
gctactcattttcatgaattgacagcattggctgaccaattgccaacagtgaataatcta
catgtttcagcattaactaccgatgaggcattaactatgctatatcaagtaaagaaaggt
gtctgtgatcagagttttgggattcatgttgcggaacttgctaattttcctaagcatgta
atagaaaatgccaaacaaaaggccctggaactagaggaattccagcattttggaaaacct
caaggatctgatgaaatggaaccagcagccaagaggtgctaccacgaaagagagcaaggt
gaaaaaataattcagacatttctggccaaagtaaaggaattaccctttgcagaaatgtct
gaggacggcatcagaaccaaattaaaacaactgaaagctgaagtaatatcacaaaataac
agttttgtgaatgaaataatttcacggataaaagttactccatga
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