Gracilinanus agilis (agile gracile opossum): 123234713
Help
Entry
123234713 CDS
T07702
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123234713 (FOCAD)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123234713 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
123234713
NCBI-ProteinID:
XP_044516604
LinkDB
All DBs
Position
1:complement(246612310..246976112)
Genome browser
AA seq
1804 aa
AA seq
DB search
MSEDLRKRFEFPNSLIQSQAVGHLIAAVLKENSLSEKINQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVVQNHAEFSYILNGILNLIPSTRNTHGLIKAVVKLLQMQALKEGKDG
ENAVKDLYGIRNHHHPLITVLENRSDCWPVLLQQLTAFFQQCPERSEILCISIMAPFLRY
LYCEPSQLQEYSKLRMGLLKVLLQPKGPCDKEKPSLMEKHVLQLFCDLVPYLQVKDLVQT
TEVTLFLQELYLNLLRHPVFWEKELIQLSLQILCVCEVSLKITGECSSLIHLLEQNFELL
KEGFPVEQAIIGLSLLILQTPTSQHKPILNLALKLFSSSGTKNIPTSSLLLVMPLLQILS
STALEDCISAEDGSPSRQELALTLLEMVQQEGSREQNQLTSYKLTFPVTSMYYPMFTTWR
ILEQMKEESTVCDWLSSVKSLLPITTHVPVHVFLLLAHLLVQEKGESLRNVLRTTTEIAK
ADSSQVPNLVPVLMFKLGRPLEPILYNDILYTLPTLGVHKVCVAQILRVIQVLGNTPQLR
AVTLRLMTSLWEKQDRVYPELQRFMALSDVPSLSVGKEIQWEKLIAKAASIRDICRQRPY
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWSALSPKLSCDTR
PLILKTLSELFALVPSLTVNTSEYENFKVQVLSFLWSHSQSKDPTVATAAYKSLSAFGSE
EHTILHLPEEVRPEIDLPEELDGNEEEEEKEPDLSVPGSSYIKLLSVTSPSVFPALEEFF
VSLVKQEMVNMPRGIYHSALRGGASRSDQGKTIAGIPNFMLKMYEKNKQPGLKSGLAAGM
LLCYDLPIHMGKDGKPINRFLASRGRSFQQILVALIHEVNIQPSEWHRSILLPQSWLGFM
NRTYHAVLQGRQAELDMQLKHGKDAPEEIQYKKFTAWLWVRDMLTDQIIKSASKESPVVK
GNALLALTSLAVVVSKHENSLSSETDGAPEIEPDFLPMKQWISMVLNTLLVIVDSHHQPK
GQVFSWFYHKSYSGENTASAIARSCAAMALSLLVPVFILSCKEKVEEVLSMLTARLPGKP
SADESQAVQIHMGLALGMFISRLCEEKVSDVSGQQLNLLLMTSLDALENCCFDTSIEYNT
GCILGVGLVLSLMSHSSQTESRVHIATSLRKLSAYLDGSGDQSRTFQEVLAYSLSCVCTS
AFSAGIIEAVEAEDIMNKLRTLVENNQQNSGFALALGNIVHGLSVCGHGKAEDLSNRLLP
AWIKIVLTEGSPTMQCLAAVNGLVALVGSEGAIMQLKSETIQASHFQSQLNEVIRTITQV
ISFSGVIGLQTNAAWLLGHLHLSSLSSSQSRTSVPADFSYLPENSFIRAAVDFIIEGGKK
GPESVPPSLVKVAMKSIATVGENYQYPPVNWASLLSPLMRLNFGEEVQQLSIEIMVTQAQ
SSQNAAMLLGMWVVPPLIHSLNLKTKKYLLVSLPLWMKHVSEDQLQVFTEVFMVQLFEAT
FAVQDPELCQSALQGLSQAMKLPSPAQYLWSQLCWATEKIFDLLPNKIRRSDVDLYINAA
KCLSEMTDTEIDRITHITKNNIKKAAFVKVYLVSQGRFPLMHWNDVIEVAVRCQDRETVA
WMMLHGLYHARIISHANTGVLKRMEWLLELMGYIRNVAYKSTSVENVALEEAINFLLLLF
AASVVAWGDHDAPLLLGLSASWLPWHQEGGVAGFSPGYLGQSPNNRVTLQETLTLLPSSM
LLLLSKEPWKEQTQKFIDWLFSIMESPQEALSSSSRDLLKATTLALRFLPEFKKKVVWSR
AYGW
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggatttaaggaaaagatttgagtttcctaattcccttatccagtcacaggct
gtaggtcaccttattgctgcagtactgaaagagaatagtttgtcagaaaagatcaaccaa
tctacaaaccagactcctgccttgaatctcttgtgggagaagtgttgcagtgacaatgtt
gtggttcgaactgcctgctgtgagggtctggtggcacttgttgtacagaatcatgctgag
ttcagctacattcttaatggaatactcaaccttatcccctcaaccagaaatacacatggc
ctaataaaagctgttgtgaagttattacaaatgcaggcactgaaagaaggaaaggatgga
gagaatgccgtgaaagatttgtatggtatcagaaaccaccatcatcctctcatcactgtg
cttgaaaacaggtcagattgctggccagttcttctacaacagcttacagcttttttccag
cagtgtccagaaaggtcagaaattttatgcatctctataatggccccatttctccgttac
ctttattgtgagccatcccagttacaggagtattccaaattgagaatgggtttgcttaaa
gtgttgctccaacccaagggtccttgtgataaagaaaaaccctccttaatggaaaaacat
gtccttcagttgttttgtgacttggttccatatttacaggtaaaagatttggtacaaaca
acagaagtgactctgtttcttcaagaattatatttgaatcttttacgtcatcctgttttc
tgggaaaaggagctcattcagctaagcctacaaattctgtgtgtttgtgaagttagctta
aagataactggagaatgttcatctttaattcaccttttagagcaaaatttcgaacttctg
aaagagggatttccagttgaacaagcaataattggattaagtttactcatcctacagaca
cccacaagtcagcacaaaccaatcttaaatctagctttgaaactcttctcctcttctggg
accaagaacatcccaacctcatccctgctgctggtgatgccactactccagattttgtca
tccacagccttggaggattgtatttcagcagaagatggcagcccttctagacaagagctg
gctctaaccctcttggaaatggttcaacaagagggctccagagaacaaaaccagttgacg
tcctataagcttactttccctgtaaccagcatgtattatccaatgtttacaacctggaga
atccttgaacaaatgaaagaagagtccacagtatgtgattggctgtcttctgtgaaatca
ttgctgcctatcaccacccatgttcctgtacatgttttccttctattggcccacttgctc
gttcaagaaaaaggagagagtcttcgtaatgtacttaggaccaccaccgaaatagccaaa
gccgactcgtctcaggtaccaaatcttgtccctgttttgatgttcaaacttggaagacca
ctggaacctattttgtataatgacattttatatactctccctactttgggagtacataag
gtttgtgttgcacaaatactgcgagtgatccaggttctgggaaacactccacaacttaga
gctgtcactttacgcttaatgacatctttgtgggagaaacaggatcgagtgtacccagaa
ctgcagcggttcatggcattgtctgatgtcccgtctttatctgtgggcaaagagatacag
tgggagaagctgattgccaaagcagcctccatcagggacatatgcagacaaagaccatac
cagcatggggcagatatgttggcagctatttcacaggtgttgaatgaatgtaccaagcct
gatcaagctactccagcagccttagtattacaaggtcttcatgcactctgtcaagctgag
gttgtttgcattcgttccacatggagtgccctctctccaaagctgagttgtgacacacgg
cctcttatattaaagacactaagtgagctatttgctctagttccgtcactgacagtgaac
acttctgaatatgagaattttaaagttcaagttctcagcttcctctggagtcactctcaa
agcaaggaccctactgtggcaactgcagcatacaaatccttgtcagcatttggttcagaa
gagcacaccattcttcatctcccagaagaggtaaggccagaaattgatctcccagaagag
ctggatggaaatgaagaagaggaggagaaagagccagacctttctgtccctggttcttct
tatatcaaactcctttcagtcaccagtccttcagtctttccagcacttgaagagtttttt
gtatcacttgtgaagcaagagatggtgaatatgcctcgtggtatctatcattctgcatta
agaggaggtgcatctcgttcagaccaagggaagacgatagcaggaattcccaatttcatg
ttgaaaatgtatgagaaaaataaacaaccaggcctgaaatctggccttgcagctggtatg
ttgctttgctatgatcttccaatccacatgggtaaagatggcaaacccatcaatcgtttc
ttggccagtagagggcggagtttccagcagatattagtggctcttatacatgaggtgaac
atccagccatccgaatggcaccgatcaattcttcttccacagtcctggctgggatttatg
aataggacataccatgccgtcttacagggaagacaggcagagttggatatgcagttaaaa
catggaaaagatgctcccgaggagatacaatacaagaaatttacagcttggctctgggtt
agagacatgctgactgaccagatcatcaagtcagcttcaaaggaaagcccagtggtcaaa
gggaatgcactcctggcattaaccagtcttgctgttgttgtatctaaacatgaaaacagc
ctatcctcagaaactgatggggcaccagagattgaacctgatttccttcccatgaaacag
tggatttctatggtgctcaatactcttctagtaattgtggacagccatcaccagccgaag
ggacaagtcttctcctggttctatcacaaatcatactctggtgaaaacacagctagtgcc
attgctcgttcctgtgctgctatggctttatccctcctggttccagttttcattttgtct
tgcaaggagaaggtggaggaagttttgagtatgctgactgctaggttacctgggaaacca
agtgcagatgagtctcaagccgttcaaatccacatgggccttgctttggggatgtttatc
tctcgtttgtgtgaagagaaagtcagtgatgtatctggccaacagttgaaccttcttctg
atgacatctttggatgctttggaaaactgctgctttgacaccagtattgaatacaacact
ggttgcatcctgggagtagggcttgtcctgtcgctcatgagccacagcagtcaaactgag
tcccgtgtacacattgccacatctcttcgaaagctctcggcatatctggatgggagtggg
gaccaaagcagaacatttcaagaggtccttgcttactctctcagttgtgtatgcacttcg
gctttcagcgctggaattattgaggctgtggaggctgaagatattatgaataaacttcgg
acgttagttgaaaataaccagcagaattcaggctttgcgttggcattagggaacatcgtt
catggtttgtcagtctgtggacatggaaaagcagaagacttgagcaacagactacttcca
gcatggataaaaattgttcttacagagggctctcccacaatgcaatgcctagcagctgtt
aatggtctggttgccttggttggttctgaaggtgcaatcatgcagctgaaatcagaaaca
attcaagcttctcactttcaaagtcaacttaatgaagtaatcagaaccataactcaggtc
atcagtttctctggagtgattggactgcagacaaatgcagcttggcttcttggacatctt
catctatccagcttgtcctcgagtcagagcagaacatctgttcctgctgactttagctat
ttgcctgagaacagctttattagggcagctgttgactttatcattgaaggagggaagaaa
ggtcctgaatctgttcctccttccctggtgaaagtagcaatgaaatccatagcaactgtt
ggagaaaattaccagtatcctcctgtgaattgggcttccctgctttccccgcttatgaga
ctaaactttggtgaagaagttcagcagttatccattgaaattatggtaacccaggcacaa
tcatctcaaaatgcagctatgctgttgggaatgtgggtggttccaccgctaatccacagt
ctgaatctgaagacaaaaaagtaccttttggtgtctctaccactgtggatgaaacatgtt
tctgaggaccaactccaggttttcactgaagtgtttatggtgcagctttttgaagctact
tttgctgtccaggatcctgagttatgtcaaagtgccttacagggacttagccaggctatg
aaactgcccagtccagctcaatacctctggagtcaactctgctgggctactgagaaaatc
tttgatcttttgccaaacaagattcggagaagtgatgtcgacctgtatatcaatgcagca
aaatgcctttcagaaatgacagataccgagattgatcgcattacccatattactaagaac
aacataaagaaggctgcctttgtgaaagtatatttagtctctcaaggtcgatttcctctg
atgcattggaatgatgtgattgaggttgcagttcgatgtcaagacagagaaacagttgct
tggatgatgttacatggtttatatcatgcacgaattataagccatgcaaacacaggagtg
ctgaagagaatggaatggctgttggaactgatgggttacattagaaatgttgcttacaag
tcaacatctgttgagaatgtggctcttgaagaggctatcaactttctgttgctgcttttt
gcagcttctgtggttgcatggggtgaccacgatgcccctctcctgctcggactcagtgcc
agctggttgccatggcaccaggaaggaggcgtggctgggttctctcctggttatcttggc
cagagtccaaacaacagggtcaccttgcaggagactctcaccctccttcccagcagcatg
ctgcttctgctaagcaaagaaccatggaaggagcaaacacaaaagttcatagattggcta
ttcagtattatggaaagtccacaagaagcactctcatcaagttccagagatcttttgaaa
gctacaactctggccttgagatttcttcctgaatttaagaagaaagtagtatggtccagg
gcatatggttggtaa
DBGET
integrated database retrieval system
