Gracilinanus agilis (agile gracile opossum): 123234796
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Entry
123234796 CDS
T07702
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123234796 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123234796 (POLR1B)
Enzymes [BR:
gas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123234796 (POLR1B)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123234796 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
123234796
NCBI-ProteinID:
XP_044516706
LinkDB
All DBs
Position
2:complement(149398190..149420039)
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGCKWRNLPTGPSLKHLTEPGYGLPKEQQLPTLQELTRAHIESFNYAMREGLSHAVQA
IPPLEFAFKDERITLAIVDAVVSPPMVPKGSICKELKVYPAECRGRRSTYRGKLTADISW
SVNGNPKGIIKQSLGYIPIMVKSKLCNLYNLPPKSLIEHHEEAEEMGGYFIINGIEKIIR
MLIMPRRNFPIAMIRPKWKTRGPGYTHYGISMHCVRDEHTAINMNLHYLENGSVMVNFIY
HKELFFLPLGFVLKALVAFSDYQIFQELIKGREENSFFRNCISQMLRIVMEEGCITQKQV
LNYLGERFRVKLSLPDWYTNEQAAEFLLNQCVCIHLKSNEEKFYVLCLMTRKLFTFAKEE
CMEENPDSLMNQEVLTPGRLILMFLKEKMEAWLVSVKIALDKRAQKTNVSMNTENLMKIF
SMGLDLTRPFEYFLATGNLRSKTGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAVCEVVTQTAYSSSIAPLLCSLGVT
PFDGTPSQPYSECYPVMLNGIMVGWVEKDLAPAITDSLRNFKVLGEKQIPPWTEIVLIPM
TGKPSLYPGLFLFTTPCRMIRPVQNLELGKEELIGTLEQLFMNIAIFENEIVPGVTTHQE
LFPHSLLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTELID
LSEKIKQGDDSLVFGVKPGDLQVLQKLDNDGLPHIGSLLKYGDPFYSYLNVNTGESFVTY
YKNKENCIVDNIKVCSNDSGNGKFKSICITMRIPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALG
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTVCNQSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggttgtaagtggcggaatttgcccactgggcccagcctgaaacacttgact
gaaccgggctatgggctccccaaagagcagcagctacccactttgcaagaactcacgcgg
gcacacatcgagtccttcaattatgctatgcgagagggactcagccacgcggtgcaggcc
attccacccttggaatttgccttcaaagatgaacggatcactcttgctattgtggatgct
gtcgttagtcctccaatggtccctaaggggagcatctgcaaagagttgaaagtctaccca
gcagaatgtcgaggtcggagaagtacatatcggggaaaactgacagctgatatcagctgg
tctgtgaatgggaacccaaaaggaattattaaacaatcccttggctatattcctattatg
gtgaagtctaagctgtgcaatttatataatcttcctccaaaatctcttattgagcaccat
gaagaggcagaggagatgggaggctattttataataaatggtattgaaaaaattatcagg
atgctgattatgccacggagaaattttcccattgcaatgataagaccaaaatggaaaacc
agaggccctggctatacccattatggaatatcaatgcattgtgttagggatgagcacact
gctatcaacatgaaccttcactacttggaaaatggctcggtgatggtgaattttatttat
cataaagaattattttttcttcctctgggatttgtactcaaggcattggttgccttttct
gattaccaaatttttcaggagctgatcaagggaagagaggagaactcattttttaggaac
tgtatttctcagatgttaagaattgtaatggaagaaggttgtattacacaaaagcaggtc
cttaactacttgggagaacgttttagggtaaagctcagccttcctgattggtacacaaac
gaacaagctgcagaatttctattaaatcagtgtgtgtgtatccatctgaaatccaacgaa
gaaaagttttatgtgctttgtctcatgactcggaagttgtttacttttgccaaagaggaa
tgtatggaggaaaatcctgatagcttaatgaatcaggaagttctcaccccagggagactc
atccttatgtttttaaaggaaaagatggaagcttggttggtgtctgttaaaatagctttg
gacaaaagggctcaaaagaccaatgtctctatgaacaccgaaaatctgatgaagatattt
agtatgggattagatcttacaagaccgtttgaatattttcttgctactggaaacttaaga
tcaaaaacaggcctcggcatgcttcaagattctgggctgtgcgtggtggccgacaagctg
aatttcatccgttacctgtcccatttccgctgcgtgcaccgaggggccgccttcgccaag
atgaggaccaccacagtccgcaagctgctcccagagtcttggggcttcctctgtcctgtg
cacacgccagacggggagccctgcggcctgatgaaccacatgacggccgtctgcgaggtg
gtcacacagaccgcttactcgtcctccatcgcccctttgctttgctccttaggggttacc
ccatttgatggaacaccaagtcagccttatagcgaatgctaccctgttatgttgaatggt
atcatggttggctgggtggaaaaagatcttgctcctgccattacagattctctccgaaat
tttaaggtattgggggaaaaacaaatccctccttggacagaaatagtccttatcccaatg
actggaaaaccaagtttgtaccctggactgtttcttttcactactccttgtagaatgata
cgacctgtgcaaaatttggaactgggtaaagaagaactgattggcactctggaacagctc
tttatgaacattgctatctttgagaatgagattgttcctggagtaaccacacaccaggag
ctctttcctcacagcctgctcagtgtggtagccaatttcattcctttctctgaccataat
cagagtccccgaaacatgtatcagtgccagatgggtaaacaaaccatgggatttccactt
cttacttaccaggaccgatcagataataaactatatcgtcttcaaactccacaaagccca
ttagtcagaccttacatgtatgattactatgatatggataactatcctattgggacaaat
gctattgttgctgtcatttcttatacaggctatgatatggaagatgccatgattgtgaat
aaagcttcctgggaaagaggctttgctcatggaagtgtctacaagacagagctcatagat
ctttctgaaaaaatcaaacaaggagatgacagtctggtgtttggagtcaaacctggagat
ctacaggttctacagaaattagacaatgatggcttgccacatattggttctcttctaaaa
tatggagaccctttttacagttacctaaatgtcaacacgggagaaagctttgtgacatac
tataaaaataaagaaaattgtattgtggataacatcaaagtatgcagtaacgactctgga
aatgggaaattcaaaagcatttgtatcaccatgaggatcccccggaacccaacgatcggg
gacaaatttgccagtcgccacggccagaaggggattctgagtcggctgtggcctgccgag
gacatgccctttacggagagtgggatggtcccggacattctgttcaatccgcacggtttt
ccatcccggatgaccattggcatgctcatcgagagcatggcggggaagtcggcagcgctg
cacgggctctgccatgacgccaccccctttaccttttcggaggagaactccgccctgggc
tactttggggagatgttgaaggcggccggctacaacttctacggcacggagaggctgtac
agcggcatcagcggggtggaactggaagcggacatcttcatcggggtagtctactaccag
cgcttgcgccacatggtctcagacaagttccaggtgaggacgacgggcgcccgagacaaa
gtcacgaaccagcccatcgggggccggaacgtgcagggcgggatccggtttggggagatg
gaacgggacgccctgctagcgcacggcacctccttcctgcttcatgaccgcctcttcaac
tgctcggaccgctcggttgcccatgtgtgcgtgaagtgcggcagcctgctctctccgctg
ctggagaagcccccaccgtcctggtctgccatgcgcaacaggaagtacaactgcaccgtg
tgcaaccagagtgacaccatcgacacggtgtccgtgccttacgtgttccgctactttgta
gccgaattggcagctatgaacatcaaagtcaaacttgacgttgtttaa
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