Gracilinanus agilis (agile gracile opossum): 123234801
Help
Entry
123234801 CDS
T07702
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123234801 (NPHP1)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
123234801 (NPHP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
DDHD
BUD22
Motif
Other DBs
NCBI-GeneID:
123234801
NCBI-ProteinID:
XP_044516711
LinkDB
All DBs
Position
2:152186729..152229241
Genome browser
AA seq
690 aa
AA seq
DB search
MLTGRGRGPLQIVQRRSQDLRQQVGRLLSESQLKGALDVNKRRDIFQRCIQLKREIDENR
KALKNLNKGDEPAPVGNYNQRKEDEENILEKLTKQLQELASTISGENVTQHEKVQSISQA
KEEERDSEESEEEDEDEEEDNEDEESAEDDEETEEEEEGDSSDEQPCNKEYIAVGDFAAQ
LRGDLAFKKDEVLLILEKKPDGWWIAKNIHGNKGLVPKTYLEPCVKKEDDEEYSEEESEE
DVEVVDETANGTEIKTRTDSHWSAIRKAMTEINTIDVLTSMGAIPAGFRPSMLFQLLEEG
SQFQASCFLQPELTPSQLAFKDMIWDPEKGTIKPRPSRVSLILTLWSCKMIPLPGVSLQI
LSRHVRLCLFDGSKVLSNIHTVRATWQPKKPKTWTFSPRVTGILPCLLDGDCFIRSNSSS
PELGILFEVGVSYVRNSTGEKGELSCGWVFLKLFDANGIPIPPKTYELYLNGGTPYEKGV
EVDPSVSRRVASSVFHQMMTMRRQPQLLVKLRSLNRRSRSILSLLPETLIGNMCYIHLLV
FYREILGDVLLKDRKSMQNADLISSPVLATFPKLMEQPDLMDALRTAWAEKESTLKRSEK
RDREFLKSMFIIVYHDCVYPLLHSTLLPPFRWAEEETEATRWKVIHDFLKQNQENSGALH
ALLSPEGVHEPFDISEQAYDFLEEARKSGR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgggaggggccgagggcccctgcagattgtgcagcgccgcagtcaggatcta
cgacaacaggttggacgtttgctttctgagagtcaactgaaaggagccctagatgtcaat
aaaaggcgggatatttttcagagatgtatccagttgaaaagggaaatagatgaaaaccga
aaggctcttaaaaatttaaacaaaggagatgagccagctcctgtggggaactacaaccag
aggaaagaggatgaagaaaatattttggaaaagcttacaaagcagctacaagaacttgct
tcaactataagtggagaaaatgttactcaacatgaaaaagttcagagtatttcccaggct
aaagaagaggaacgagactctgaggaatcggaggaggaggatgaggatgaggaggaggat
aatgaagatgaagaaagtgctgaggatgatgaggaaacagaggaggaagaggaaggtgac
tctagtgatgaacagccatgtaataaagaatatattgctgtcggtgattttgctgctcag
ctgagaggagatcttgcatttaagaaagatgaagttcttctcatacttgaaaagaaacct
gatggctggtggatagctaagaatattcatggaaataaaggtcttgttcccaaaacctac
ctggagccttgtgttaaaaaggaagatgatgaggaatacagtgaagaggaaagtgaagaa
gatgtggaagtggtagatgaaacagctaatggaacagagatcaaaacacgaactgattct
cattggagtgctattagaaaagctatgacagagattaacacaattgatgttttgacttct
atgggagctattccagcagggtttcgaccatcaatgcttttccagcttttagaagaaggg
agtcagtttcaagcaagttgctttttacagcctgaacttaccccttcacaactagctttt
aaagatatgatatgggatcctgaaaaaggcactattaaacctcgaccaagccgtgtgtca
ttgattctaactttatggagctgtaaaatgattcctcttccaggtgtaagcctacagatc
ctcagcagacacgtacgcctttgcctatttgatggaagtaaggtcctgagcaatattcat
acagtcagagctacatggcaacctaaaaagcccaaaacgtggaccttttctccacgagta
actggtatcttgccatgcttgcttgatggagattgctttattagatctaattcgtcatca
ccagaacttgggatattatttgaagttggcgtctcttatgttcgtaattcaaccggtgaa
aagggagagttaagctgtggctgggtcttcctgaaactttttgatgccaatggaataccc
attcctcccaaaacctatgaactttacttgaatggtggcactccttatgaaaaaggtgtt
gaagtggatccttcggtttcaagaagagttgccagcagcgtttttcatcagatgatgaca
atgaggagacagcctcaacttctggtcaaactgagatctctaaatagaaggtcaagaagc
atattgagtctactaccagaaacattaataggaaatatgtgctacattcacttgttggta
ttctatcgagaaatccttggtgatgtgctcctgaaagacaggaaaagtatgcaaaatgct
gatttaattagtagtccagtactggcaacctttcctaaactcatggagcaacctgacttg
atggatgcacttaggactgcgtgggctgaaaaagaaagtactttaaaaagatctgaaaag
agagacagagagtttctgaagtccatgtttatcatcgtctaccatgactgtgtgtaccct
ctgctccattccaccctcctcccgccattccggtgggcagaagaagaaaccgaagctact
cggtggaaagtgattcatgacttcctcaagcaaaaccaagaaaactctggggctctccat
gctttactgtcaccagaaggtgttcatgaaccttttgacatttcagagcaggcctatgac
ttcttagaagaagcaaggaagagtggaaggtga
DBGET
integrated database retrieval system
