Gracilinanus agilis (agile gracile opossum): 123234860
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Entry
123234860 CDS
T07702
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123234860 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123234860 (LSM1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123234860 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
123234860 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123234860
NCBI-ProteinID:
XP_044516792
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Position
2:170877855..170894042
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AA seq
133 aa
AA seq
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MNYMPGTASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKQEAEKLKVQALKER
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgccgggtaccgccagcctcatcgaggacattgacaagaaacacttggtg
ctccttcgagatggcaggacccttataggctatttgcgaagcattgatcagtttgccaat
ttagtgttacaccagactgtggaacgcattcatgtgggcaaaaaatatggtgatattcct
cgagggatttttgttgtccgtggagaaaatgtggtcctcctaggagaaatagacctggag
aaggaaagtgacactcccctccagcaagtgtctattgaggaaatcctcgaagagcaaaga
gtagagcagcagactaagcaggaagcagaaaaactgaaagtccaagctctcaaggaaagg
ggtctctctattccccgagcagatactctggatgagtattag
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