Gracilinanus agilis (agile gracile opossum): 123235371
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Entry
123235371 CDS
T07702
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123235371 (RC3H2)
04121 Ubiquitin system [BR:
gas04121
]
123235371 (RC3H2)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
123235371 (RC3H2)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123235371 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-CCCH_4
zf-C3HC4
Prok-RING_4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
123235371
NCBI-ProteinID:
XP_044517420
LinkDB
All DBs
Position
2:320805251..320859069
Genome browser
AA seq
1211 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHDTPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKDIIFPLRTALAAPPKFWYRLRNKKITATVRTFPLLNKV
GVNNTVTTTAGNVISVIGSTETTGKLVPSTNGISNAENSVSQLIPRGADTTLRALENVKK
VGKVGSSGQNISGASAESVTENKIGSPPKTPVSNVAATSAGPPTVGTELNSVPPKSSSFV
TRVPVYPQPSESIQYFPDPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVP
ESSLPPASVPYADHYSTFPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRP
PMYQRDDIIRSNSLPPMDVMHSSVYQTSLRERYSSSLDGYYPMACQPPSEPRTTVPLPRE
SCGHLKTSYEDQLRRKPEQWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTEFSEN
VSDVRGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVH
LFETQRRAKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSD
YVPYVNAVDSRWSSYGSDSTSSAHYIERDRFIVTDLSSHRKHSSTGDLLSIELQQAKSNS
LLLQREANALAMQQKWNSLDEASHLTLNLLSKEMELRNGESDYTEDTTDTKPDRDIELEL
SALDTDEPDGQGEQIEEILDIQLAITSQNDQLLNGTTMENGHPLKQHPKEPVEPKRQSLG
EDHVILEEQKAVLPVTSCFSQPIPASISNASCLPVTTSVSVSNLILKTAHVMSEDKNDFL
KPVANGKMVNS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggctgctcagtggacagaattcctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaagcccatcagtttaggttgttcacacaccgtctgcaagacc
tgcttaaataaacttcaccgaaaagcatgcccttttgaccagactgccattaacacagat
attgatgtacttcctgtaaactttgcacttctccagttagttggagcccaggtaccagat
catcaaacagtgaaattaagtaatctgggagagaacaagcactatgaggttgcaaagaaa
tgtgttgaggatttagcactctacttaaaaccactaagtggagggaagggtgtggctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgactcttgtaaattgt
caacttgtagaagaagaaggtcgtgtaagagccatgcgagcagcacgatcacttggggaa
agaactgtaactgaactgattttacaacatcagaaccctcagcaattgtctgccaatcta
tgggctgccgtcagagctcggggatgccagttcttaggaccagctatgcaagaagaagcc
ttaaagttggtattattggccctggaagatggttctgctctctcaaggaaagttttggta
ctttttgttgtccaaagattggaaccaagatttcctcaggcgtcaaaaacaagtattggt
catgttgtgcagctactgtatcgtgcttcttgttttaaggtcacaaaaagggatgaagat
tcttctctgatgcagttaaaggaagaatttagaagttatgaggctttacggagggagcat
gatgcccagatagttcatattgctatggaagcagggcttcgtatatcacctgaacagtgg
tcttcacttctttatggtgatttggcacataaatcacatatgcagtccatcattgataag
cttcagtctccagaatcctttgcaaagagtgtccaggagttgacaattgttttgcagcgt
acaggtgatccagcaaacctaaaccgtttgaggcctcatttggagcttcttgcaaatata
gatcctaatccagatgctgtctctccaacttgggagcagctagagaatgcaatggttgct
gtcaagacagtggtacatggacttgtggactttattcagaactacagtcgtaaaggccac
gacacaccacagcctcagccaaatagcaaatataaaactagtatgtgccgagatctgcga
cagcagggagggtgtccaagaggaacaaattgtacatttgctcattctcaggaagagctt
gaaaaagatataatttttcctctgaggactgctttagctgcacccccaaaattttggtat
cgtttaaggaataaaaagatcacggcaactgtccgaacatttcctctcctaaataaagtt
ggtgtaaacaacacagtcacaaccacagctggaaatgtcatttctgtcataggaagtact
gaaacaactgggaaacttgttccaagtaccaatgggatttcaaatgcagaaaacagtgtt
tcccagttaattccacgtggtgctgacaccacattaagagctctggagaatgtgaagaaa
gtagggaaggttggatccagtggtcagaatatctctggggcatctgcagaatctgtaact
gaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagctacctcagct
ggaccccctactgttggaacagagctgaattctgtgcctccgaaatccagctcatttgta
actagagtacctgtctatcctcagccctctgaaagcattcagtattttccagatccaagg
actcagatatcctttgaagttccacagtacccacagacaggatactacccaccacctcca
acggtaccagctggtgtggctccctgtgttcctcgttttgtgaggtccaataatgttcca
gaatcttccctcccacctgcttccgtgccatatgctgatcattacagcacatttccccct
cgagatcgagtgaattcttctccttaccagcctcctcctccgcagccgtatggaccagtt
cccccagtaccttccggaatgtatgctcctgtgtatgatagtcggcgcatctggcgccca
ccaatgtaccaacgggatgacattattaggagcaattctttacctccaatggatgtgatg
cattcgtctgtctatcagacgtctttgcgagaaagatatagtagttccctagatgggtat
tatccaatggcttgtcagccacctagtgagccaaggacaactgtacctttaccaagggaa
tcttgtggtcatttgaagaccagttatgaggatcagttaagacgaaaaccagaacagtgg
gcgcaatatcatacccagaaagcaccccttgtttcttcaactcttcctgtggcaacacag
tcaccgacaccgccttctcctctgttcagtgtagactttcgaaccgagttctccgagaat
gtaagtgatgtacgtggtacaaaatttgaggaggatcatctttcacattattcaccctgg
tcctgtggcaccataggctcttgtataaatgccattgattcagagcccaaggatgtcatt
gctaattcaaatgctgtgttaatggatctggacagtggagatgttaagagaagagtacat
ttatttgaaactcagagaagggcaaaagaagaagatcctataattccttttagtgatgga
cccattatctcaaaatggggtgcaatttctagatcttcccggacaggctaccataccaca
gatcctattcaggccactgcttcccaaggaagtgctactaaacccatcagtgtatcagat
tatgtcccctatgtcaatgctgttgattcaaggtggagttcatatggctctgattctact
tcttcagcacactatatagaaagggatagatttattgttactgatttatccagtcataga
aagcattccagtactggagatcttctaagcattgaacttcagcaggcaaagagcaactca
ttgttgcttcagagagaggctaatgcattagccatgcaacagaaatggaattccctagat
gaagccagtcaccttaccttaaatcttctgagcaaggaaatggaattgagaaatggagag
agtgattatacagaagatacaacagatactaagcctgatagagatattgaattagagctt
tcagcacttgacactgatgaacctgatggtcaaggtgaacaaatagaagagattctggat
atacaacttgctattacatctcaaaatgatcagcttctgaatggaactacaatggaaaat
ggccacccactaaagcaacacccaaaggaaccagtggaacccaagagacaaagtttaggt
gaagaccatgtgattctagaggaacaaaaagcagtcctgccggtaacttcttgctttagc
cagccaatcccagcatccattagcaatgcaagttgcctgccagtcaccacatctgtcagt
gtcagcaatctcatcttgaaaacggctcatgttatgtctgaggataaaaatgacttttta
aagcctgttgcaaatgggaagatggttaacagctga
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