Gracilinanus agilis (agile gracile opossum): 123235447
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Entry
123235447 CDS
T07702
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123235447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gas03009
]
123235447
Ribosome biogenesis [BR:
gas03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123235447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
EIF3I
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_Aladin
WD40_like
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_WDR41
Beta-prop_DCAF4
DUF2076
DUF6235
UTP15_C
Motif
Other DBs
NCBI-GeneID:
123235447
NCBI-ProteinID:
XP_044517508
LinkDB
All DBs
Position
2:345842390..345844827
Genome browser
AA seq
690 aa
AA seq
DB search
MAASGGGRRDPLAPSGIPCAFSPWGQYYFSLAGPDGHLRVWETASSRLHQDFVPSAHLSA
TCTCLAWAPPRSSAKEGPQRKKRKSEAVGTSDQVDLLAIGTAVGSILLYNTVKGELQSKL
VSGGHDNKVNCIQWHQDNDCLYSCSDDKYIVEWNTQTCRVKCKWKGDISSVSALCISPDG
KMLLSAGRTIKLWDLETKEVYRHFTGHATAVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLFNVWQIRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGCCKKPLTSNCTIQIATSGKDKESTPTPIPILAAAFCSDKQSLLLVYGSHLQPAIE
RVSLNSKEPHMCLIRDINCWAPKIGIAVTKVRTPIMNSEAKVLGPGIPGHHAAIKPTLET
EKTESKRRLKENEQISIEERLGAMDIDTVKEKRKGDLKADSYPVLLVQGLESNDCYMLNK
VLQTRKDTLIRNTVLRIPVYAVIPLLNELTKRLQGHPNSAVLMVPWLKSVLTIHASYLST
LPDLVPQLGMLYQLMESRVKTLRKLSRLHGKLILLITQVAASEKTQGVPQPEQTAKLVYE
EESSEEESDDEVMADKNSDENWEEDEEERESEKDEDDDDDDDDDDDDDDDGDDEQEIDQD
TENGEDKEMALEKEINGDSDLDPENESEEE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagtggcggaggccgtcgcgaccctctggccccctccgggattccctgtgca
ttttctccgtggggccagtactacttctcgttagccggtccggatggtcacttgcgggtg
tgggagacagccagcagccgcctgcatcaggacttcgttccttccgctcacctcagcgcc
acctgcacctgcctggcctgggccccgccgcggtcgtctgccaaggaaggtccccagagg
aaaaaaaggaaatctgaagctgtaggaaccagtgaccaggttgatctattggccattggt
acagcagtcggcagcattttattatacaacacagtaaaaggagagttacagagcaaacta
gtaagtggtggacacgacaataaagtaaattgcatacaatggcaccaagataatgattgt
ttatatagctgttcagatgataaatatattgtggaatggaatacacagacttgcagagta
aagtgcaaatggaaaggtgacatcagcagtgtcagtgctttgtgcatcagtcctgatggg
aagatgttgctttcagctggtcgaactatcaaactatgggatttggagactaaagaagtc
tatagacatttcacaggtcatgccacagctgtttcatcactcatgttcacaactataaga
cctcctaatgaaagtcagccctttgatggaattactggcctttatttcttgtctggagca
gtacatgaccggttatttaatgtgtggcaaattcggtcagaaaataaagagaagaatgca
gtgatgtcttttacagttactgatgaaccggtctacattgacctgactctgtcagaaaac
aaagaggagcctgtaaagttagctgttgtttgtagagatggacaagttcatttattcgaa
cacatattaaatggatgctgcaaaaagcctttgacttcaaattgcactattcagattgca
acatctgggaaagacaaggaatcaacaccaacacctatccctattctagcagcagctttt
tgttcagacaagcaatctttactgcttgtgtatggcagtcatttgcagccagcgattgaa
agagtgtctttgaactccaaagaaccccatatgtgtctgataagagatatcaattgttgg
gctccaaaaataggaatagctgtaacaaaggtaagaacaccaataatgaactcagaggcc
aaagttttaggccctggaattcctggacatcatgcagccatcaaacctacattggagacc
gagaaaacagaaagtaaaagaagattaaaggagaatgagcaaattagcattgaagaacga
ctgggagcaatggacatagacactgtgaaagaaaaaaggaaaggggacctgaaggcagac
agctacccggttcttctagtgcaaggcctagaaagcaatgactgctacatgctaaataaa
gtacttcaaacaagaaaggataccttaatcagaaacacagtgttaaggattccagtatat
gctgttattccattattgaatgagctcactaagaggttgcaaggacatccaaatagtgct
gtacttatggttccatggttaaaatctgtattaaccatacatgcatcttatctgtccaca
ttgcctgacctggtaccccaactaggcatgttgtatcagttgatggagagcagagtcaaa
accttaaggaaactctctcgattgcatgggaagctcattcttcttattacacaggtggca
gcatctgaaaaaactcagggtgtgcctcaacctgagcaaacagccaaactggtttatgag
gaagagtcttctgaagaggagtctgatgatgaagtaatggcagataaaaattctgatgag
aattgggaggaggatgaagaagagagagaaagtgaaaaggatgaagatgacgatgatgat
gacgatgatgatgatgatgatgatgatgatggtgacgatgagcaagaaatagatcaggac
acagaaaatggtgaggacaaagaaatggctcttgaaaaggaaataaatggagattctgat
ttggacccagaaaatgaaagtgaagaagaatga
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