Gracilinanus agilis (agile gracile opossum): 123235635
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Entry
123235635 CDS
T07702
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gas04515
]
123235635
Cell adhesion molecules [BR:
gas04515
]
Cadherins
Protocadherins
123235635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
123235635
NCBI-ProteinID:
XP_044517761
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Position
2:complement(401844158..401846546)
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AA seq
796 aa
AA seq
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METAPRKILQNRQVVFLIVVLLLSEAVSEPGRYSVAEETENGSIVTNIAKTMGLEVGELS
SRGARLISEDKIQYLQLKRDTGFLLIKKKLDREELCGPVEPCVLPFQILLENPFQFFRAE
LRVEDINDHSPTFPESEILLKISESTSPGALFPLKIAHDLDVGINSLQNYTINPNPYFLL
RTRXSSDERKYPELVLDKMLDREEQPEITLTLTAVDREVPPRFGTAQVRILVVDINDNVL
IFDHAQYMVQIPENSLVGSPIVXVSARDLDTGIYGDISYTIFQASDAVSQTFGVDSISGV
IRLKKQLDFEAIQKYEVDIEAIDGGGLSGKCTVVVQVMDLNDNFPELTVSSLNSNIPENS
SETVVAIFSIQDRDSGDNGRIMCSIXEDLPFSLKPTFKNFYTLVTEGALDRESRAQYNIT
VTVRDLGSPMLKTEHYFTVFISDVNDNPPVFTQTAYIFYLRENNSPALHFGNVSADDRDA
GTNAKVTYSLQPPESEDLPLFSYISINSDNGHLYVLRSLDYETIQAFQFTVRAADGGTPS
LRSQALVQVVVLDENDNSPFVLYPLQNGTGPCNDLVPRAAEPGYLVTKVVAIDRDSGQNS
WLSYQLLKATDPGLFTVWAHNGEVRIGKPIRDRDTIKQRLLVLVKDNGKPPLSIAATLNV
LLVDRFSEPHVQFPDTNKEQIHTDSLTVYLVISLVXVSFFFLVSIFLFIAVHLCKKKRNL
GSGVCLETSGPYPGNLVDISGAGTLFQSYQYEVYPTSGLRNEEFKFLKPIIPSLQDQNTG
RDLEEIPTFRSSSGFN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgccaaggaagattctgcagaacaggcaagtggtatttcttattgttgtt
ttactcttgtctgaggcggtttcggagccagggaggtactccgtggcagaggaaacggag
aatggttccattgtgactaatattgcaaaaaccatggggctagaggttggggagttgtcc
tcccgaggggcccggttgatctctgaggataagattcaatatttgcagcttaaacgtgac
actgggtttcttctgattaagaagaagctggaccgggaggagctgtgtggccctgtcgag
ccttgtgtgctacctttccagatcttactggaaaatccttttcagtttttccgggctgaa
ctgcgagtagaagacataaatgaccattcacccacgttcccagaatctgagatactcctg
aaaatatcagaaagcacttcgccaggggctctgtttccactaaagatcgcccatgatttg
gacgttggaataaacagtctccagaactataccatcaaccccaacccctatttcctcctc
cgcactcgcnacagcagtgatgaaagaaaatatccggagctggtgttagataaaatgttg
gacagggaggagcagcctgagatcactttaactctcacagcagtagaccgggaggttcca
cccagattcgggactgctcaagtccggattctggttgtggacatcaatgacaatgtccta
atcttcgatcacgcccagtatatggttcaaataccagagaacagcctggtgggctctcca
attgttnnagtgtctgctcgagatttagacacagggatctacggagacatatcctacact
atattccaagcttcagatgcagttagtcaaacttttggagtagactccatctcaggagtg
attcgactcaaaaaacaactggacttcgaggcaattcagaaatacgaggtggatattgaa
gcaatcgatggcggaggtctttctgggaaatgcactgttgtggttcaagtaatggatttg
aatgacaattttccagaactgactgtgtcttcacttaacagcaatatcccagagaactct
tcagagactgtagtcgctattttcagcatccaagatcgagactctggagacaacggaagg
ataatgtgttctatctaggaagatctccctttctccctgaaaccaacttttaagaacttt
tacacactggtcacagagggagctctggacagggaaagtagagctcaatataacattact
gttaccgtcagggatctaggatccccgatgctcaaaaccgagcactacttcacggtattc
atctccgacgtcaatgacaatcccccagtatttacccagacagcctatatattctacctc
agagagaacaacagccctgccctccattttgggaacgtcagtgcagatgacagggatgca
ggaaccaatgctaaagtcacctattctctgcagcctccagagtctgaagacttgcccctc
ttctcctatatctccatcaactcagacaatgggcatctctatgttctgagatccctggat
tatgaaactatccaagcctttcagttcactgtgagggctgctgatggtggcaccccatcc
ctgaggagccaggctctggttcaggttgtggtcctggatgaaaatgataattctcctttt
gtactctatcctctgcagaatggcactggtccctgtaatgatcttgttcccagggcagca
gagcctggttacctggtaaccaaggtggtggctatagatagagactcaggacaaaattcc
tggctttcctaccagctgctcaaggccacagacccaggactcttcactgtgtgggctcat
aacggggaagttcgtataggaaaacccatcagggacagagacacgatcaagcagaggctt
ctggttctggtgaaggacaatggaaagccacctttgtctatagcagccacactgaatgta
ctcctggtggacagattctctgagccacatgtacagttcccagacacaaataaggagcaa
atccacactgactccctcactgtctatttggtaatttctttagtttaagtctcattcttc
ttcctggtctccatttttcttttcatagctgtgcatctatgtaaaaagaagagaaatttg
ggaagtggagtttgcttggagaccagtggtccctatccaggcaacttagtggatatcagt
ggagcaggaactcttttccagagttatcagtatgaggtgtatccaaccagtggcttaagg
aatgaagaattcaagttcctgaagcctatcattcccagcctccaagatcagaatactggg
agagacctagaagaaatcccaacctttaggagtagctctggcttcaattag
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