Gracilinanus agilis (agile gracile opossum): 123235639
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Entry
123235639 CDS
T07702
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gas04515
]
123235639 (PCDHB1)
Cell adhesion molecules [BR:
gas04515
]
Cadherins
Protocadherins
123235639 (PCDHB1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
MP_p6
Motif
Other DBs
NCBI-GeneID:
123235639
NCBI-ProteinID:
XP_044517765
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All DBs
Position
2:complement(401925246..401927708)
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AA seq
820 aa
AA seq
DB search
MAPLPGKLQANRPMVALLLFLCASEADAGTVRYSVAEEMESDSFVANVAKDLGLEAGELL
ARGARLVSDDSKQHFRLHRKTGDLFVKEKLDREDLCGKADPCVLRFEIVLEEPLQSFRAE
VRVFDINDNAPVFPNHGPVLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSSNAYFHL
HTRFRSHGPKYAELVLIKPLDREEQPQVGLTLTAVDGGSPAKSGTAQILIMVLDVNDNVP
QFSRLVYRAQILENSPNGSLVTSVSATDSDEGTNREIIYSLAQNPEGILQTFHINSENGE
IRLRGQVDFEAIENYDIDVQAIDGGGLSAHSKVLVEVVDVNDNAPDVLITSISSRIPEDS
PLNTVVALFGVRDRDIRVGGKITCFIQGDLPFTIKPTFRNSYSLVTGGALDREKVEGYNL
TIVAMDSGTPRLSSETIIEVMISDINDNPPVFKEASYIMTVRENNSPAVFIGKVQAEDLD
SEENAQITYSLLPPESGDLSVFSYISINSNNGKLYALRSMDYEAIRAFQFVVKAVNGGPL
PLSSQIIVRVVVLDVNDNLPMILYPLQNSTSPCNDLVPRAAEVGYLVTKVVAVDGDSGQN
SWLSYELLKATDLGLFSVGRQSGEIRTLRLISERDSMKQKMVIVVRDHGQPSLSTTATLN
ILLVDGFSDPYVQLRDQSKRERKTNPSTKYLVISLAVLSCLFLFSVTVIFLIHIYQKIKY
REKQFTTSEHFYYDCSFPNNLMDGQGGETLGRVCPYEEGSVTGTGNSEFRFLKRFMPNFP
APCGVEERNKKETGSHLPSNLDLDSPRRSEGCPRMSDEYM
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcacctctaccggggaaacttcaagctaacaggccaatggtggcccttctcctcttt
ctgtgcgcgtccgaggctgacgcaggcacagtacggtattcggtggctgaagagatggag
agcgattcttttgtggccaatgtagccaaggacttgggactggaggccggggagctcttg
gccagaggggcacgactggtttcagatgacagcaagcaacattttaggcttcaccgcaag
accggagatctgtttgtgaaagaaaagttggaccgggaggacctgtgcgggaaagcggac
ccttgtgtgttgcgctttgaaatcgtcctggaggagccgctgcagtccttccgagccgag
gtaagggtttttgatatcaatgacaatgctccagtgttcccaaaccacgggccggtttta
aagatccctgaaagcactcccctgggctctcggtttcctttgcagagcgcccaggatttg
gatgtggggctcaatggccttcaaaattacaccctgagctccaacgcctatttccacttg
catactcgcttccgcagccacggtcccaagtatgcggaactagtactcattaaacctcta
gatcgtgaggaacaaccccaggtcggcttaacccttacggcagtggatggcgggtctccg
gctaagtctggaacagcgcagatcctcatcatggttcttgacgtcaacgacaatgtccct
cagttttctcggttggtgtaccgcgcccagatcttggagaatagtcccaatggttcatta
gtcacctcagtgtccgctactgactcagatgaaggcaccaaccgggaaataatctattct
ttggctcaaaacccagaaggaattctacagactttccacatcaactctgaaaatggagaa
atccgactccgaggacaggtggattttgaagctattgaaaactatgatattgacgttcaa
gccattgatggtgggggactgtctgctcacagcaaggtgctggtggaagtggtggacgtg
aacgacaatgccccagatgtattgatcacctctatttcaagccggatcccagaggactcc
ccacttaacaccgttgtggccctttttggtgtgcgagaccgtgacattagagtaggaggg
aaaatcacctgttttattcaaggcgatcttccttttactatcaaaccgacattcagaaat
tcctattccctagtcactggaggagccctcgatcgggagaaagtcgaaggatataacctg
accatagtcgctatggattcaggaactcctaggctgtcctcagagacgatcatcgaagtg
atgatatccgacattaatgacaatccccctgtgtttaaggaggcgtcttatatcatgact
gtgagagagaacaacagccccgcagtttttattggcaaagtccaagcggaggacctggat
tccgaggagaatgcccagattacttattccctgcttcctcccgaaagtggcgatctctct
gtcttctcttacatctccatcaattcgaacaatggaaaactctatgctctgagatcaatg
gactatgaagcgattcgggcttttcaattcgtggtgaaggctgtaaatggtgggcctttg
cctctgagcagccaaatcattgttcgagtagttgtcttggatgtcaacgacaacctccca
atgatcttgtatcctctgcaaaacagcacttctccttgcaatgatctggtgcccagagca
gcagaagtgggctacttggtaaccaaggtggtcgctgtagatggggactctggtcagaat
tcttggctttcttatgagctgctcaaggccacagacctcggactattttctgtgggacgg
caaagcggagaaattcgaaccctgaggctgatatccgagagagactccatgaagcaaaaa
atggtcattgttgttcgggatcacggtcagcctagcctctccaccaccgccacattgaat
attctgctggtggacggcttttctgatccctatgtacagcttcgggatcagtccaaacgc
gagaggaagacaaacccttccactaaatacttggtaatttccttggctgtgctttcctgt
ctctttctgttttcagtcactgtaatttttctcattcacatatatcagaagatcaaatat
cgagaaaaacagtttactacctctgagcacttctactatgactgcagtttccctaataat
ttgatggatgggcaaggtggagagactctaggccgggtttgtccttacgaagagggctct
gttactggcactggtaatagtgagttccggtttctgaaacgattcatgcccaacttccca
gcgccttgtggtgtggaagaaagaaataagaaagaaactggatctcatttaccatccaat
ttggatctggatagcccaaggaggtcagaaggctgcccccgaatgtctgatgaatatatg
taa
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