Gracilinanus agilis (agile gracile opossum): 123236296
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Entry
123236296 CDS
T07702
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123236296 (CHD1)
03036 Chromosome and associated proteins [BR:
gas03036
]
123236296 (CHD1)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123236296 (CHD1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123236296 (CHD1)
SLIK complex
123236296 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
123236296
NCBI-ProteinID:
XP_044518534
LinkDB
All DBs
Position
1:307991648..308124739
Genome browser
AA seq
1804 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGS
HSDSESDTSREKKVQSKPPKVDNSEFWKSNPSILAVQRSAMLRKQQQQQQQQQQQQQTSS
NSGSEEDSSSSEDSEDESSSEVKRKKHKDEDWQMSGSGSPSQTGSDSESEEEREKSSCDE
SESDYEPKNKVKSRKPQIRTKAKNGKKISGQKKRQIDSSEDDDDDYDKRGSRRQATVNVS
YKEDEEMKTDSDDLLEVCGEDVPQPEEDEFETIERFMDSRIGRKGATGATTTIYAVEADG
DPNAGYEKTKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALISKKFQPRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGPEGLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWAPQMNAVVYLGDINSRNMIRTHEWMHLQTKRLKFNILLTTYEILLKDKA
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLKERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSRNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGQDRTGGRLGKVKGPT
FRISGVQVNAKLVISHEEELVPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKE
AQRLSGAGNSKRRKIRTKKNKMVKSIKMKEEIRSDSSPLPSDKSDDDDDKDEITSVKNPN
RKVKTEKDSEEKSEPDVCVKKEQEEKREAKEKENKRELKRERKEKEDKKDIKEKDIKEKR
ESKIKEAMQKDKDIKEEKLSETKSDSKEKSKKSTISDAPVHITASGEPVPISEDSEELDQ
KTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQDSQQNNDQNNSGLNTHVIRNPDVERL
KENTNHDDSSRDSYSSDRHLSQYHDHKDRHQGEAYKKNESRKRSYSSFSNGKDHREWDHY
KQESRYYSDSKHRKMDDHRSRDHRSVLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYSHH
KTSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWS
SRKT
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacatagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctggatcagcttctggttctggatctggatcaagctctggaagtagtagt
gatgggagcagcagtcagtcaggcagcagtgattctgactctgggtctgactcaggcagt
cactctgattctgagtcagatacttctagagaaaagaaagtacaatcaaaaccaccaaaa
gttgataactctgagttttggaaatcaaatcccagtattctggctgtccaaagatctgca
atgcttagaaagcagcagcagcagcagcagcagcaacagcaacaacaacaaacttcctca
aatagtggatcagaagaggattcttctagcagtgaagattctgaagatgaatcatctagt
gaggtcaagaggaaaaagcataaagatgaggattggcagatgtcagggtcaggatctccc
tcccagacaggttcagattctgaatcagaagaagaaagagaaaaaagcagttgtgatgaa
agtgaatctgactatgaaccaaaaaataaagtcaaaagcagaaaacctcaaatcagaact
aaagcaaaaaatggaaagaagatctctggccagaaaaagagacagatcgattcatctgaa
gatgatgatgatgattatgataaaagaggttctcggcgccaggcaactgtcaatgttagt
tataaggaagatgaagaaatgaaaactgattcagatgatttattggaggtttgtggagaa
gatgttcctcaacctgaagaagatgaatttgagacaatagaaaggtttatggacagtagg
attggaagaaaaggagcaactggtgctactacaaccatttatgcagttgaagcagatggt
gaccccaatgctggatatgaaaaaaccaaggaaccaggagagatccagtatttaattaaa
tggaaaggatggtcccatatccataacacttgggaaactgaagaaaccttaaaacagcag
aatgtgaaaggaatgaaaaaattagacaattacaagaaaaaagatcaggaaaccaaacga
tggttgaaaaatgcttctccagaagacgtggagtattataattgccagcaagaacttaca
gatgatctacataagcagtatcaaatagtagaaagaataattgctcattccaatcaaaag
tcagcagctggctatcctgattattattgcaaatggcagggcctcccatattcagaatgt
agctgggaagatggggctcttatttccaaaaagtttcagccacgcatagatgaatatttc
agtaggaaccaatccaaaaccactccctttaaggattgtaaagtattaaaacaaaggcca
aggtttgtggcattgaagaagcaaccatcttatattgggggaccagaaggtttagaatta
agagattatcagttgaatggcctaaactggcttgcccattcatggtgcaaaggaaatagc
tgtatacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttcttaac
tatcttttccacgaacaccaattatatgggcctttcttgttagtagtaccactttccaca
ctcacttcctggcaaagagagattcagacatgggctccccagatgaatgctgtggtctat
ttaggggatattaacagcagaaatatgataagaacacatgaatggatgcatcttcaaacc
aaacgattaaaatttaatattcttttgacaacttatgaaattttattgaaggacaaggca
ttccttgggggcctgaattgggcattcataggtgtagatgaagctcatcgattaaagaat
gacgactcacttctgtataagaccttaatagactttaaatccaatcatcgtcttcttatt
acgggaacccctctacaaaattccctcaaagaactctggtctttgctccacttcatcatg
ccagaaaaattttcttcctgggaagattttgaagaagaacatggcaaaggaagagaatat
ggttatgcaagtcttcacaaggagcttgagccttttctgttacgacgagttaagaaagat
gtagaaaaatctctacctgccaaagttgagcagattttaagaatggaaatgagtgcattg
caaaagcaatattataaatggattttaaccaggaattataaagcccttagcaaaggttca
aagggcagtacctcaggctttttgaacattatgatggagctcaaaaagtgttgtaaccat
tgctacctcatcaaaccacctgataataatgaattctataataaacaagaagccttacag
catttaatccgaagtagtggaaaattaattcttcttgataagctgttgattcggctaaaa
gaacgaggcaacagagttctgattttctctcaaatggtgcggatgttagatatacttgca
gaatatctgaagtatcgtcagttcccatttcaaagactagacggttcaatcaaaggggaa
ttaagaaaacaagcattagatcattttaatgctgaaggatctgaggatttttgtttctta
ctttccacaagagctggaggactaggcatcaatttagcatctgctgataccgttgttata
tttgattctgattggaacccacaaaatgatcttcaggcacaggctagagcccacagaatt
gggcagaagaaacaggttaatatttatcgtctagttacaaagggatcagttgaagaagat
attcttgaaagagcaaaaaaaaagatggtgcttgatcatctagtaattcagagaatggac
acaactgggaagactgtactacatacaggttctgctccttcaagttctacaccttttaat
aaggaagagctatcagcaattttaaagtttggtgctgaagaactttttaaagaacctgaa
ggagaagaacaagagcctcaggaaatggatattgatgaaatcctgaagagagctgaaact
catgaaaatgaaccaggtccattaactgtaggagatgaattgttgtcccagtttaaggtg
gccaacttttcaaatatggatgaagatgatattgagttagaacctgaaagaaattcaaga
aactgggaggaaattattccagaggatcaaagaagaagattagaagaagaagaaagacaa
aaagaacttgaagaaatatatatgctaccaaggatgagaaactgtgcaaagcagattagc
ttcaatggaagtgaaggccggcgcagtagaagtagaagatactctgggtctgatagcgat
tcaatatctgaaagaaaaaggccaaagaaacgtggaagaccaaggactatcccacgagag
aatattaaaggatttagtgatgcagaaattaggcggtttatcaagagttacaagaaattt
ggtggtcctctggaaagattagatgcgattgctcgagatgctgaattagttgataaatca
gagacagacctcagaagactaggagagctggtacataatgggtgtatcaaagctttaaag
gatagttcctctggacaggaccgaacaggtggtaggcttggaaaagtgaagggtccaaca
ttccgaatatcaggagtacaagtgaatgccaagctagtcatctctcatgaagaagaatta
gtaccattgcacaaatcaattccttcagatccagaagaaaggaaacaatataccatccca
tgccacacaaaggcagctcattttgatatagactggggcaaagaagatgattctaatcta
ttaattggtatctatgaatatggatatggcagctgggaaatgattaaaatggatcctgac
cttagtttaacacacaagattttgccagatgatcctgataaaaaaccccaagcaaagcaa
ttgcagacccgagcagactacctcattaaattacttaataaagacctggcaagaaaagaa
gcccagaggctttctggtgcaggaaattcaaagaggaggaaaataaggactaagaagaat
aaaatggtgaagtctattaaaatgaaagaggaaataaggagtgattcttctccattgccc
tcagacaaatctgatgatgatgatgacaaggatgagatcacttctgtgaaaaatccaaat
agaaaagtaaaaacagaaaaagacagtgaagaaaaatctgagccagatgtttgtgtaaag
aaggaacaagaagaaaaaagggaagcaaaagaaaaggaaaataagagagaacttaaaagg
gagagaaaagaaaaggaggataagaaagatataaaggaaaaagatattaaagaaaaaaga
gaaagcaaaataaaagaagctatgcagaaagacaaggacataaaggaagaaaagctcagt
gaaaccaaatctgatagcaaagaaaaatctaagaaatccacaatttcagatgctccagtt
catattactgcaagtggtgaaccagttcctatttctgaggattctgaagaactagaccag
aagacattcagtgtttgcaaagaaagaatgaggcctgtaaaagcagccctgaaacagctt
gatcgacctgaaaaagggctttcagaaagagaacagctggaacatactagacagtgttta
atcaaaattggtgatcatattactgaatgtctaaaagaatatacaaatcctgaacaaatt
aagcagtggagaaagaacctgtggatttttgtgtccaagtttacagaatttgatgcaagg
aaactacacaaactgtataagcatgcaattaaaaaacgacaagactctcagcaaaacaat
gaccaaaacaacagtggcttgaatactcatgtgattaggaatccagatgtggaaagacta
aaagagaatacaaatcatgatgacagcagcagggacagttattcttctgatagacatttg
tcccagtatcatgaccataaagacaggcatcagggagaagcttacaaaaagaatgaatct
aggaaaagatcatattcatcctttagcaatggtaaagatcatcgggaatgggatcattat
aaacaagaaagcagatactacagtgatagtaaacacaggaaaatggacgaccataggagt
agagatcacagatcagttttggaaggaagtttaaaagaccgttctcattctgaccatcgt
tctcattcagatcaccggttgcactcagaccatcgatcaagttctgaatattcacaccat
aaaacctcaagggattatcggtatcattcagattggcagatggaccacagagcttccagt
agtggcccaaggtcaccactagatcagaggtctccctatggttcaagatcacctttaggc
catagatctccctttgaacattcatctgatcacaaaagtacaccggagcatacatggagt
agccggaaaacataa
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integrated database retrieval system
