Gracilinanus agilis (agile gracile opossum): 123236644
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Entry
123236644 CDS
T07702
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123236644 (DDX1)
03016 Transfer RNA biogenesis [BR:
gas03016
]
123236644 (DDX1)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123236644 (DDX1)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123236644 (DDX1)
Transfer RNA biogenesis [BR:
gas03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
123236644 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SNF2-rel_dom
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
123236644
NCBI-ProteinID:
XP_044518941
LinkDB
All DBs
Position
2:complement(5465740..5488878)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTVKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRSTKGVIKGKYYYEVSCHDQGLCRVGWSASQASLDLGTDKFGFGFGGTGKKSHNKQFD
GYGEEFTMHDTIGCYLDIDKGQVKFSKNGKELGLAFEIPAHLKNQALFAACVLKNAELKF
NFGEEEFKFPPKDGFVGLCKASEGHVVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRLWERLGKTHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYTVRAIKEHKMDQAIVFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAVSLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLA
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcagaaatgggtgtcatgcccgagattgctcaagccgtggaggagatg
gactggctcctcccaactgatatccaggctgagtccatcccacttatcctaggaggaggt
gacgtgcttatggctgcagaaacaggaagcgggaagactggtgctttcagcattccagtc
atccagatagtttatgagaccctcaaggaccagcaggagggcaagaaagggaagacgacg
gtgaaaactggagcttcagtgctcaacaaatggcagatgaacccatatgaccgaggatcg
gcttttgccatcgggtctgacggtctttgttgccagagccgagaagtgaaggagtggcat
gggtgtaggtccacgaaaggagtgataaaaggcaaatactactacgaggtgtcctgccac
gaccaagggctgtgccgagtcggctggtcggcttcccaggcctccctcgatctgggcaca
gacaagtttggctttggctttggcggaaccgggaagaaatcccacaacaagcagtttgat
ggttacggagaggagttcaccatgcacgacacgatcggatgctacctggacatcgacaaa
gggcaggtcaagttttccaaaaacggaaaagagctcggcctggccttcgaaataccggca
cacctgaagaaccaggcgctcttcgccgcgtgcgtcctgaagaatgcggaactgaaattt
aactttggggaagaagaatttaagtttccccccaaagatgggtttgttggtctctgcaag
gcttccgaaggccacgttgtgaagtctcagcacacaggaagcgcccaggtggctcagacc
aagttcctgcccaacgccccgaaagcgctcattgtggagccgtcacgtgagctggccgag
cagaccttgaacaacgtgaagcagttcaagaaatacgtcgacaacccgaagctgagggag
ctcctgatcattggtggggtggctgcccgggatcagctctctatcctggaacaaggggtg
gacatagtggtcgggactccaggaaggctggacgacttggtgtccaccgggaagctcaac
ttatcccagatccgcttcttggttctggatgaggctgacgggcttctttcccaaggctac
tcggacttcatcaacaggatccacaaccagattcctcagatcacctcggatgggaaaaga
ctgcaggtcatcgtctgctcggccactctgcactcttttgatgtcaagaagctttcggaa
aagatcatgcacttcccgacctgggtggacctgaaaggagaggattctgtccccgaaacc
gtgcaccacgttgtggttcctgtgaaccccaaaacggaccgactgtgggagaggctgggc
aaaactcacatccggactgacgaagtgcacgcgaaagataacacgaggccaggcgccaac
agccccgagatgtggtccgaagccatcaagatcctgaagggggagtacacggtgcgggcc
atcaaggagcacaagatggaccaggccatcgtcttctgcaggaccaagatcgactgcgac
aacttggagcagtacttcatgcagcagggcggaggtccggacaagaagggccaccagttc
tcctgcgtctgtcttcacggagaccgaaagcctcacgagaggaagcaaaacctggagagg
ttcaagaaaggagacgttcggtttctgatttgcactgatgtggctgccagagggatcgac
atccacggggtgccctacgtcatcaacgtcaccctgcccgacgagaagcagaactacgtc
catcgcatcggccgagttggccgggcagaaaggatgggtctggccgtgtccctggtggcg
acagagaaggagaaggtctggtaccacgtctgcagtagccgcgggaagggctgctacaac
acccggctgaaggaggacggcggctgcaccatctggtacaacgagatgcagctgctggcc
gagatcgaggagcacctcaactgcaccatctcccaagtggagccggacatcaaagtcccc
gtggacgagttcgacgggaaggtgacctacggccagaagagagccgccggggggggcacg
tacaagggccacgtggacatcctggcgcccaccgtgcaggagctggcggccctcgagaag
gaggcccagacgtccttcctgcacctcggctacctgcccaaccagctcttcaggaccttc
tga
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