Gracilinanus agilis (agile gracile opossum): 123236673
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Entry
123236673 CDS
T07702
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
gas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123236673
09123 Folding, sorting and degradation
03018 RNA degradation
123236673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123236673
03041 Spliceosome [BR:
gas03041
]
123236673
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123236673
mRNA cycle factors
Stress granule specific factors
123236673
Spliceosome [BR:
gas03041
]
Complex C
Other components
Complex C specific factors
123236673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_occluded
RRM_10
RRM_3
YflT
Sulfatase
Motif
Other DBs
NCBI-GeneID:
123236673
NCBI-ProteinID:
XP_044518976
LinkDB
All DBs
Position
2:complement(32711441..>32713181)
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AA seq
478 aa
AA seq
DB search
KMNGMLLNDRKVFVGQFKSRKEREAELGGRAKEFTNVYIKNFGEDMDDERLKELFGKFGP
ALSVKVMADESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGQAQKKLERQTEL
KRKFEQMKQDRIISYQGVNLYVKNLDDGIDDERLRKEFSPFGTITXAKVMMEGGLSKGFG
FVCFSSPEEATKAVTEMNGRIVATKPLYVALAQCKEERQAHLTSQYMQRMASVRAVPNAV
INPYQPPSGHFMAAIPQTQNRAAYYPASQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAA
PRLPFSTMRPASSQVPRVMSTQYVANRSTQTMGPRPAAAAAAATPAVRTVPQYKXAAGVR
NPQQHLNAQPQVTMQQPAVHVRRQEPLTASMLASAPPQEPKQMLGERLFPLIQAMHPTRA
GKITGMLLEMDNSELLHMLESPESLCSKVDEAVAVLQAHQAKAAAQKAVNSATGVPTV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
aaaatgaatggaatgcttcttaatgatcgtaaagtctttgttggtcaatttaaatcccgt
aaagaaagagaagcagaacttggaggtagagcaaaagaattcaccaatgtttacataaaa
aattttggtgaggacatggatgatgaaagacttaaggagctctttggcaagtttggacct
gctttaagtgtaaaagtaatggctgatgaaagtggaaaatccaaaggctttggctttgtg
agctttgaaagacatgaagatgcacaaaaagctgtagatgagatgaatggaaaagaactg
aatggaaaacaaatttatgttggccaagctcagaaaaaactagaacgacagacggaactt
aagcgcaaatttgaacaaatgaagcaggataggatcatcagctaccagggtgtgaacttg
tatgtgaaaaatcttgatgatggtattgatgatgagcgtcttcgaaaagaattctcacca
tttggtacaattactnnagcaaaggtgatgatggaaggtggcctcagcaaagggtttggg
tttgtatgtttctcttcaccagaggaagccaccaaagcagtcacagaaatgaatggcagg
attgttgccactaagccattgtatgttgctttagcccaatgcaaagaggaacggcaggct
cacctcacaagccagtatatgcagagaatggcaagtgtcagagctgtgcccaacgctgta
atcaacccctatcagcctccttcaggtcacttcatggcagctattcctcagactcagaac
cgtgctgcatactatcctgctagccaaattgctcaactcagaccaagtcctcgctggact
gctcagggtgccagacctcatccattccagaacatgcccggtgctatccgcccagcagct
cctaggctgccatttagtacaatgagaccagcttcttcacaggttccacgagtcatgtca
acacagtatgttgcaaacagatcaactcagacgatgggtccacgtcccgctgctgctgct
gccgcagctactcctgctgtccgcacagttccacagtataagntagctgcgggtgttcgc
aatcctcaacagcatcttaatgcacaaccacaggttaccatgcagcagcctgctgttcat
gtgcgacgtcaggaacctttaactgcttccatgttggcatccgcccctcctcaagagcca
aagcagatgttgggtgaacggctgtttccactcattcaggccatgcaccccactcgggct
ggtaaaatcactggcatgttgctagaaatggacaactctgagcttcttcatatgcttgag
tctcccgagtctctctgttctaaggttgatgaagctgtagctgtacttcaagctcaccaa
gctaaagcagctgcccagaaagcagttaacagtgccactggcgttccaactgtttaa
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