Gracilinanus agilis (agile gracile opossum): 123236721
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Entry
123236721 CDS
T07702
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03013
Nucleocytoplasmic transport
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123236721
03015 mRNA surveillance pathway
123236721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123236721
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123236721
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123236721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123236721
NCBI-ProteinID:
XP_044519046
LinkDB
All DBs
Position
2:complement(42287077..42321431)
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AA seq
532 aa
AA seq
DB search
MRALARRYAWXPSPPRKAAAASSAVASRRRRCCSCARLPXAPLPRLLLLRALGTMATDSW
ALAVDEQEAAAESLSSLHIKEEKIKPDANGIVKADENSGKTDEEEKEDRAAQSLLNKLIR
SNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMML
AEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPLNKYPQCLCLSPTYELALQTGKVIEQMGK
FYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVM
IATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWRFAQKVVPDPNIIKLKREEETLDTI
KQYYVMCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQVALLSGEM
MVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRI
GRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIDRLDTDDLDEIEKIAN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccctcgcgaggcgctacgcctggnnaccctccccaccgcgtaaggccgccgct
gcctcttccgccgtcgcttcccgccgccgccgctgctgctcgtgtgcgcgcctgcccnnc
gccccgctaccccggctgctgcttctccgcgctcttgggacgatggccaccgactcttgg
gccctagcggtggacgagcaggaggcggccgccgagtcgttgagcagcttgcatatcaag
gaagagaaaatcaagccagatgccaatggaattgtcaaagctgatgagaattcaggaaag
acagatgaagaagagaaagaggacagagctgctcagtcactgctgaacaagttgattaga
agcaacctagttgataacacaaatcaggtagaagtcctacagcgggatccaaattccccc
ctctattcagtgaagtcttttgaagagcttcgactgaaaccacagcttctgcaaggggtc
tatgctatgggctttaatcggccatctaagatacaagagaatgccctgcccatgatgctt
gctgaacctccacagaacctgatcgcccaatctcagtctggtactggtaaaacagctgcc
tttgtcctggctatgctcagccaagtggaacctttgaacaaatacccccagtgtttgtgt
ctctcacccacttatgagctggctcttcagacaggaaaggtgattgaacagatgggcaag
ttttatccagaacttaaacttgcttatgctgttcgaggcaacaagttggaacgaggtcaa
aagatcagtgagcagattgtcattggcactccgggtacggttctggattggtgctccaaa
ctaaaattcatcgaccccaaaaagatcaaggtgtttgttctggatgaagctgatgtgatg
atagctacccaaggccatcaagatcagagcatccgcatccagaggatgcttcctaaggat
tgtcagatgctgcttttctctgctaccttcgaagattctgtgtggagatttgctcagaaa
gttgtcccagacccaaacatcatcaaactgaagcgagaagaagaaactttagataccatt
aaacagtattatgtgatgtgcaataaccgagatgagaagttccaggccctttgtaatctc
tatggggccatcactattgctcaagccatgatcttctgtcatacccgcaaaacagctggt
tggctggcagctgagttatccaaagaaggccaccaggtggccctcctgagtggtgaaatg
atggtggaacagagagctgcggtgattgagcgtttccgagaaggcaaggagaaagtgttg
gtgactaccaatgtgtgtgctcgaggtatcgatgtggagcaggtatctgtggtcatcaac
tttgacctgcccgtggacaaggatgggaatccagacaacgaaacctaccttcatcgtatc
gggcgcacggggcgctttggcaaacggggcctggctgtgaacatggtggacagcaagcac
agcatgaacattctcaacagaatccaggaacatttcaataagaagatagacagattggac
accgatgatttggatgagattgagaaaatagccaactga
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