Gracilinanus agilis (agile gracile opossum): 123236751
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Entry
123236751 CDS
T07702
Symbol
CDH1
Name
(RefSeq) cadherin-1 isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04015
Rap1 signaling pathway
gas04371
Apelin signaling pathway
gas04390
Hippo signaling pathway
gas04514
Cell adhesion molecules
gas04520
Adherens junction
gas05100
Bacterial invasion of epithelial cells
gas05200
Pathways in cancer
gas05213
Endometrial cancer
gas05216
Thyroid cancer
gas05218
Melanoma
gas05219
Bladder cancer
gas05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
123236751 (CDH1)
04390 Hippo signaling pathway
123236751 (CDH1)
04371 Apelin signaling pathway
123236751 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123236751 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123236751 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123236751 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
123236751 (CDH1)
05216 Thyroid cancer
123236751 (CDH1)
05218 Melanoma
123236751 (CDH1)
05219 Bladder cancer
123236751 (CDH1)
05213 Endometrial cancer
123236751 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
123236751 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123236751 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gas04515
]
123236751 (CDH1)
04090 CD molecules [BR:
gas04090
]
123236751 (CDH1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
123236751 (CDH1)
Cell adhesion molecules [BR:
gas04515
]
Cadherins
Major cadherins
123236751 (CDH1)
CD molecules [BR:
gas04090
]
Proteins
123236751 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
BACON_2
TM_ErbB1
Novirhabdo_Nv
Motif
Other DBs
NCBI-GeneID:
123236751
NCBI-ProteinID:
XP_044519087
LinkDB
All DBs
Position
2:complement(48771097..48838313)
Genome browser
AA seq
888 aa
AA seq
DB search
MGTRRSFAPSLVSLLLLLQASGWLCLDTEHCRPGFGSESYTFQVPRAHLERGLALGKVTF
ESCSGRKLNVYSSGNSRFRVTPDGVVMVKRSIELHNLETSFYIYAWDDKGKKLSAKLTLK
RPSTHHRRHLHHGEEPFPAEQREVLIFPSTHSGLKRQKRDWVIPPISCPENEKGPFPKIL
VQIKSNRDKETKVFYSITGQGADEPPQGVFIIERETGVLKVTAPLDREDIARYVLYSHAV
SSNGIPVEDPMEIVITVTDQNDNRPEFIQEVFNGFVMEGAHPGTSVMKVSATDKDDDVNT
YNAMIAYSILSQEPKSPHDSMFTINRGTGVISVLTTGLDRETNPQYTLIVQAADLDGDGL
STTATAVITVTDTNDNPPIFNPTTYVGTVLENEPDAVITRLKVTDADVPKTPEWNAVYSV
INDEKGLFTVVTDPENNDGILKTTKGLDFETKQQYVLYITAVNEVPFVVTLPTSTATVTV
DVLDVNEAPVFIPPVLRVEIPEDFGVGEKITSYTAQDPDKFLTQKITYRIWSDPANWLDI
NPDSGDISTRDNLDRENFEFVKNSTYTALIVAVDDGSPIATGTGTLQLLLSDVNDNGPVP
EPRNFDICQRNPEPQVINIIDPDLPPNTSPFMAELTHGASVNWTIEFTDNARESLILRPK
KELEFGEYKINLKLTDNQNKDQVTTLEVYVCDCEGAVSKCTKAGVIAQTGMDVPAILGIL
GGILALLILLLLLLLFLRRRPAVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHR
GLDARPEVTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFD
YEGSGSEAASLSSLNSSGSDEDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccgtcggagtttcgctcccagcctcgtctctctcctcctgttgctgcaggcg
tcgggatggctttgcctggacacggagcattgccgtccaggttttggctccgaaagttat
accttccaggtgccccgggcacacctggaacgaggcctagccttgggcaaagttaccttt
gaaagctgttctggaagaaaactgaatgtttattcctctgggaattccagatttagagtg
actcccgacggtgtcgtaatggtcaagagatctatagagctccataatttagaaacaagc
ttttatatctatgcctgggatgataaaggtaaaaagctctcagccaaattgacactgaaa
agaccgtcgacacaccatcgacgacacctccatcatggagaggaacctttcccagcagaa
cagagagaagtgctgatattccctagtacccactctggtctcaagaggcagaagagagac
tgggttatccctcccattagttgccctgagaatgagaagggtccattccctaaaatactg
gttcagatcaagtcaaaccgagataaagaaactaaagttttctacagcatcacaggccaa
ggagcagatgagcctccacaaggtgtctttattattgaaagagaaactggagtcttgaaa
gtgacagcacctttggacagagaagacatcgcaagatacgttctttattctcatgctgtg
tcttcaaatggcatacctgtggaggatccaatggagattgtgattacagtaacagatcag
aatgataatcgtcctgagtttatccaggaggtcttcaatggattcgtgatggaaggagct
catccaggtacctctgtgatgaaagtgtcagccactgataaagatgatgatgtgaacacc
tacaatgctatgatcgcttattccattctcagccaggagcccaagtcgccccacgatagt
atgttcaccatcaaccggggaactggagtcatcagcgtgctcacaactggcctagacaga
gagaccaacccacaatatacactgattgtccaagctgctgacttggatggagatggccta
agtaccacagccacagcagtgattacggtcacggacacaaatgacaatcctcctatcttc
aacccaaccacgtatgtgggcacagtgttggagaacgagccagatgccgtcattacaaga
ttgaaagtgactgatgcagatgttcccaaaacaccagagtggaatgcagtatattctgtt
ataaatgatgaaaagggtctctttaccgtcgtcactgacccagaaaacaatgacggaata
ttgaaaacgaccaagggtttggattttgagaccaaacaacaatacgttctttatataaca
gcagtgaacgaagttccttttgtcgtcactctccccacctctacagccacagtcacggtg
gatgtgctggacgttaatgaagccccagtctttataccaccggttttgagagtggagata
ccggaggattttggggtgggagagaaaattacatcctataccgctcaggatcctgacaag
tttctgacacagaagataacgtatcgcatttggagtgatccagccaattggctagatatt
aatcctgactctggtgatatttctactcgggacaatctggatagagagaactttgagttt
gtgaagaatagtacctacacagccctcattgtggctgtggatgatggatctcctatagcc
acaggcacagggacccttcagttgcttctctcagatgtgaatgataatggcccagtacca
gagcctcgaaattttgacatttgccagaggaatccagaacctcaggttataaatattatt
gatccagaccttccaccaaacacttctcctttcatggcagaattaacacacggagctagt
gttaactggactattgaatttactgacaatgcaagagaatctttgattttaaggccaaag
aaagaattagaatttggtgagtacaagataaatctcaagctgacagacaaccagaataaa
gaccaagtaaccactttggaggtgtacgtgtgtgactgtgaaggggctgtatccaagtgc
acgaaggcaggtgtaattgctcagaccggcatggatgtaccagctatcctgggaatactg
ggaggaatccttgcattgctaattttattgctgcttttgctcctctttctccgaagaagg
ccagcagttaaagagccattactgccacctgaggatgacacccgggacaacgtgtattat
tatgatgaagaaggaggtggagaggaagatcaggactttgacctgagccagttgcacagg
ggcctggatgctcgaccagaagtgactcgtaatgatgtagcaccaactcttatgagtgtc
ccccagtatcggcctcgccctgcgaatccagatgaaattggcaattttattgatgagaac
ctgaaggctgctgacagtgaccccacagcacccccttatgactctctgctggtgtttgat
tatgaaggaagcggctctgaagcagcctccctgagctccctaaattcttctggctcagat
gaagaccaggattacgattatctgaatgaatggggcaatcgctttaaaaagctggctgac
atgtatggcggaggggaggatgactag
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