Gracilinanus agilis (agile gracile opossum): 123236793
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Entry
123236793 CDS
T07702
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123236793 (CTCF)
03036 Chromosome and associated proteins [BR:
gas03036
]
123236793 (CTCF)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123236793 (CTCF)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123236793 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
123236793
NCBI-ProteinID:
XP_044519152
LinkDB
All DBs
Position
2:complement(62277281..62330603)
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AA seq
728 aa
AA seq
DB search
MEGEAVEAIMEESETFIKGKERKTYQRRREGGQDEDACHISQTQADGSEVVQEVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVPQEADATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVAKEGLPEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCTGLDGIDGENGGETKKGKRGRKR
KMRSKKEESSDSEENAEPDLDDNEDEEETAVEIEAEPEVQPVTPAPPPAKKRRGRPPGKS
SQPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVEGEEEEPQSAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaggcagttgaagcaatcatggaggagtctgaaaccttcatcaaaggaaaa
gagagaaaaacgtatcagaggcggcgggaagggggccaggatgaagatgcttgtcatata
tcacaaacccaagcagatgggagtgaagtagttcaggaggtaaacagcagtgtccagatg
gttatgatggagcagttagaccctaccctacttcaaatgaagactgaagtaatggagggt
acagtacctcaggaagctgacgctactgtagatgacacccagataataacacttcaagtt
gttaatatggaagaacaacctataaaccttggggagcttcaacttgttcaggtacctgtg
ccagtaacagtacctgtggccaccacttctgtcgaagaacttcagggggcttatgaaaat
gaagtagctaaagaaggcctgcctgaaggcgaacccatgatttgtcacacattacctttg
cctgaaggtttccaggtggtaaaagtaggtgcaaatggtgaggttgagacattagagcaa
ggggagcttcagccccaggaagatcccaattggcagaaagatccagactatcagccacct
gccaaaaagacaaaaaaaaccaaaaagagcaaacttcgttacacagaggagggcaaagat
gtggatgtttctgtgtatgactttgaagaagagcaacaagagggtttattatcggaagtc
aatgctgagaaggttgttggtaacatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaaaaagacattccagtgtgagctgtgcagttatacatgtccacgacgatcaaat
ctggatcgacatatgaaaagtcatactgatgaaagaccacataagtgccatctctgtggc
agagctttccgcacagtcaccttactgaggaaccacctaaatactcacacaggtactcgt
cctcataagtgcccagactgcgacatggccttcgtaaccagtggagaattagtgcggcat
cgccgctacaaacacacccatgagaaacccttcaagtgttccatgtgtgactatgctagt
gttgaggtcagcaagttgaaacgtcacattcgctctcacactggggagcggccattccag
tgcagcttgtgcagttatgccagcagggacacttacaagctgaaaaggcacatgagaacc
cattccggtgaaaaaccgtatgaatgttatatctgtcatgctcggtttacccagagtggc
accatgaaaatgcacatcttacagaagcacacagagaatgtggccaaatttcactgtcca
cattgtgatactgtcatagccagaaaaagcgatttgggtgtccatttgcgaaagcagcat
tcctacatcgagcaaggcaagaaatgtcgttactgtgatgctgtgtttcacgagcggtat
gccctcattcagcatcaaaaatcccacaaaaatgagaagcgtttcaagtgtgaccagtgt
gactatgcgtgcagacaggagaggcacatgataatgcacaaacgaacccatactggagag
aagccctatgcctgtagtcattgcgacaagactttccgccagaaacagcttctggatatg
catttcaaacgctatcatgaccccaactttgtccctgccgcttttgtctgttctaagtgt
ggtaaaacatttacacgccggaacacaatggcaaggcatgctgataattgtactgggcta
gatggcatagatggagaaaatggaggtgaaaccaagaaaggcaaacgggggaggaaaaga
aaaatgcgctctaagaaagaagagtcatcagacagtgaagaaaatgctgaaccagacctg
gatgacaatgaggatgaggaagaaactgctgttgaaattgaagctgaaccagaagtacag
cctgtgactccagccccgccaccagccaaaaagcgaagagggaggccaccgggcaagtcc
agccagcccaagcaaacccaacctacagcaatcattcaggttgaagaccagaacactggt
gcaattgaaaacattatagtggaagtcaaaaaagagcctgatgcagaaacagtagaaggt
gaagaagaagaacctcaatctgctgtggtagaagctcccaatggagatctcactccagag
atgattcttagcatgatggaccggtga
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