Gracilinanus agilis (agile gracile opossum): 123236860
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Entry
123236860 CDS
T07702
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123236860 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gas04812
]
123236860 (SPTBN1)
Cytoskeleton proteins [BR:
gas04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123236860 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
123236860 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CENP-K
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
123236860
NCBI-ProteinID:
XP_044519270
LinkDB
All DBs
Position
2:105432026..105623700
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRSVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIQERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDTLHEQANALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMSSEADACELWIYEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKAGMQLIAEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQILENQMDVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLIVQTKFMELLEPLNERKSNLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDSSSLNA
EAIRQRLTDLKQLWSLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADNHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQP
PSPEPRTKVSEETDSQQWDASKGEQVSQNGLPAEQGSPRMAETVETSEMVNGATEQRTSS
KESSPIPSPTSDRKAKTSVQAQTAATLPAKTQETPSAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDSKAASSGIPYHSEIPVSLKEASCEVAVDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNSWIQAITSAISSDKGEISVSTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacaacaatacagtgat
gtcaacaaccgctgggatgtggacgactgggacaatgaaaacagctcagcaaggctgttt
gagcgctctcggatcaaggctctagcagatgagcgggaggctgtacaaaagaagactttt
accaagtgggttaattcacatcttgcccgtgtgtcctgtcgaatcacagatttgtacact
gatcttcgagatggacggatgctcatcaaactgcttgaggttctctcgggagagagactt
cccaaaccaacaaagggaagaatgcgcatccattgtctggagaatgtggataaagccctt
cagtttctgaaagagcagagagtacatcttgaaaacatgggatcccatgacattgtggat
gggaatcatcgactgactcttggtctcatctggaccatcattttgcggttccagattcaa
gatatcagtgtggaaacagaagacaacaaagagaaaaaatctgccaaagatgcattgcta
ttgtggtgccagatgaaaacagccgggtaccccaatgtcaacattcacaactttactact
agctggagggatggcatggctttcaatgcacttatacacaaacaccggcctgacctgatt
gattttgacaaactgaagaaatccaatgcacactacaatcttcagaatgcttttaacctg
gcagaacagcatctgggtctcaccaagctcctggatccagaggacatcagtgtggaccat
cctgacgagaagtccatcatcacctacgtggtgacgtattaccactacttttcaaagatg
aaggccttggccgttgaaggaaaacgcattgggaaggtgcttgacaatgccattgaaaca
gagaaaatgattgagaaatacgaatcactagcctcagacctcttagaatggattgaacaa
accatcattatcttgaacaatcgaaaatttgccaactcccttgtcggagtccagcagcag
ctacaggcattcaacacttaccgcactgtggagaaaccacccaagttcacagaaaaagga
aacctggaagtgctgctttttaccatccagagtaaaatgagggccaataatcaaaaagta
tacatgcctcgggaggggaagctcatctcagatattaacaaggcctgggaacgactggaa
aaagctgaacatgaaagagaactggcactgcggaatgagctcataagacaagagaaactg
gaacaacttgctcgcagatttgatcgcaaggcagctatgagggagacatggctgagtgag
aatcaacgtctggtgtctcaggacaactttgggtttgaccttcctgctgtggaagctgcc
accaagaaacatgaggccattgagacagacattgccgcctatgaggaacgtgtccaggcc
gtagtggccgtggccaaagaactagaagctgagaactaccatgacatcaagcgtatcacg
gcgaggaaggacaacgtcatccgcttgtgggagtacctcctggagctgctcagggcacgc
aggcagcgtctggagatgaacttgggactgcagaagatattccaggagatgctgtacatt
atggactggatggatgaaatgaaggtgcttctcttatctcaagattatggcaaacatttg
ttaggtgtggaagacttgttgcaaaaacatgctctggtggaagctgacattggtatccag
gcagaaagggtgaggagtgtgaatgcctctgcccagaagtttgcaaccgatggtgaaggt
tacaagccatgcgacccacaagtcatcagggaccgggtagcccacatggagttttgttac
caagagctttgccagttggcggctgaacggcgcgcccgcctcgaggaatctcgccgcctg
tggaagttcttctgggaaatggcggaagaggaaggctggataagagagaaagagaagatc
ctctcctcagacgactacgggaaagatctgaccagtgtggtccgcctgctcagcaagcac
aaggcattcgaggatgagatgagcgggcgcagcggccactttgagcaggccatcaaggaa
ggggaagacatgatcgccgaagaacacttcggttctgagaaaatccaggaaagaatcatt
tacatccgggagcagtgggctaacctggagcagctctcggccattcggaagaagcgcctg
gaggaagcctcccttctccatcaattccaagccgacgccgacgacatcgatgcctggatg
ttggacatcctcaagattgtctccagcagcgatgtgggccacgatgagtactcgacgcag
tccttggtcaagaagcacaaggacgtcgctgaagagatcgctaactacaggccaaccatc
gacacgctgcatgagcaagccaatgccctgccccaggagcacgccgagtcccctgatgtg
caaggccggctgtccggcattgaagagaggtacaaagaagtggcagagctcacgcggctc
aggaagcaggccctccaggacaccctggccctgtacaagatgtccagtgaggcagacgcc
tgtgagctttggatctatgaaaaggaacagtggctgaacaacatgcagattccagagaag
ctggaagacctggaggtgattcagcacagattcgagagtctagaacctgaaatgaacaac
caggcatcacgggttgctgtggtgaaccagatcgcaagacagctaatgcacagcggccat
ccaagtgagaaggaaattaaggcccagcaggacaaactcaacaccaggtggagccagttc
agagaactggtagacaggaagaaagatgcccttctctcagccctaagtatccagaactac
catcttgagtgcaatgaaaccaaatcatggataagggaaaagaccaaagttattgaatcc
acccaggacctcggcaacgacctggcaggagtcatggccctccagagaaagctgactggc
atggagcgagacttagtcgccattgaggcaaagctgagtgacctgcagaaggaggcagag
aaactagagtccgagcacccagaccaggcccaggccatcttgtcacgactggctgagatc
agcgatgtgtgggaggaaatgaagaccaccctgaagaatcgcgaggcctccttgggagaa
gccagcaagctgcagcagttccttcgggacttggatgacttccagtcgtggctgtccagg
acccagacggcgatcgcctcagaagatatgccaaacacacttgcagaagctgagaagctc
ctcacgcagcacgagaacatcaagaacgagatcgacaactatgaggaagactaccagaag
atgagggacatgggtgagatggtgacccaaggacagacggatgctcagtacatgttcctt
cggcagcgcctgcaggctttggacactggatggaacgagctccataaaatgtgggagaac
aggcaaaacctcctctctcagtcccatgcttaccagctgttccttagggatacaaagcaa
gcagaggcatttcttaataaccaggagtatgttttggcccacactgaaatgcccaccacc
ctggagggtgcagaagcagcaattaaaaagcaggaagatttcatgactacaatggatgcc
aatgaagaaaagatcaacgccgttgtagagacgggtcggagactggtcagtgatggcaac
atcaactcagacaagatccaggagaaggtggactccatcgatgatagacacagaaagaat
cgtgaggcagccagtgaacttctgatgaggttgaaggacaatcgagatcttcagaaattc
ctgcaggattgtcaggagctctccctctggatcaatgaaaagatgctcacagcccaggat
atgtcttatgatgaagccagaaatctgcatagcaaatggctcaagcaccaggcatttatg
gcagaacttgcatccaacaaagagtggcttgacaaaattgaaaaggcaggaatgcagctc
attgcagagaaaccagaaacagaagctgtagtgaaggagaaacttacaggcttacataaa
atgtgggaagtccttgaatccactacccagaccaaggcccagcgactttttgatgccaac
aaggctgaacttttcacccagagctgtgctgatttggacaaatggctaaatggcctggag
agccagattcagtcagatgactatggcaaagatcttaccagtgtcaacatcctgctcaaa
aaacaacagatacttgagaatcaaatggatgtgcggaagaaggagattgaggagctccag
agccaagcccaagcattaagtcaggagggaaagagcacagatgaggttgatagcaaacgt
ctcatcgtacaaacgaaatttatggaattgctggaacccctgaatgagaggaagagtaat
ctgctagcctccaaagagattcatcagtttaacagggatgtggaggatgagatcttgtgg
gttggagaaaggatgcccatcgcaacctccacagatcatggccataaccttcagacagtg
cagctgttaataaagaaaaatcagaccctacagaaagaaatccagggacaccaacctcgc
atcgatgacatctttgagaggagccaaaacattctcactgatagtagcagcctgaatgct
gaagcaattcggcagaggcttacagacttaaagcagctatggagccttctcattgaagag
accgagaaacgccacaaaaggctggaagaatcccacaaagcccagcagtactactttgat
gccgcagaggccgaggcctggatgagtgaacaggagctctacatgatgtcagaagagaaa
gccaaggatgaacagagtgccgtctctatgttgaagaagcaccagattttggaacaagca
gtagaagattatgctgagacagtgcatcagctctccaagaccagcagggctctggtagct
gacaatcatccagagagtgaacgtattagtatgcgacagtccaaagtagataagctgtat
gcaggtctaaaggaccttgctgaagagaggcgaggcaaactagatgagagacaccggctc
ttccagcttaaccgagaggtggatgacttggaacagtggatcgccgaaagggaagtggtg
gctggatcccacgagctaggccaggactatgagcatgtcacaatgttacaagagagattc
cgggaatttgcccgagatactggaaacattgggcaggagcgagtggacacagttaatcac
atggcagatgacctcatcaactccggacattctgatgctgccacaattgcagaatggaaa
gatggtctcaatgaggcctgggctgacctccttgagctcattgacacaagaacacagatt
cttgctgcttcttatgaactgcacaaattttaccatgatgccaaggagatctttggacgt
atacaggacaaacacaagaaactgcccgaggaactcgggcgagaccaaaacacagtggaa
acgttgcagagaatgcatacaacatttgaacatgacatccaggctctaggcactcaggta
aggcagctccaagaggatgcagcccgccttcaggcagcctatgctggggacaaggccgat
gacattcaaaagagggaaaacgaggtcctggaagcctggaaagctctcttggatgcttgt
gagggacgcagggtgaggctggttgatacaggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctttggatggaagatgtcatccggcaaattgaagcccaggagaagcca
agggatgtgtcatctgttgaattattaatgaataatcatcagggtatcaaagcagaaatt
gatgcccgcaatgacagcttcactacctgcattgagcttgggaaatctctattggcaagg
aaacactatgcatcagaggagatcaaagaaaagttattgcagttgactgaaaagagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtacat
cagttctcaagggacgccagtgtggctgaggcctggctgctgggacaggaaccatacctt
tccagtcgggagataggccagagcgtggacgaagtggagaaactcatcaaacgccacgag
gcatttgaaaagtcagcagcgacttgggatgagagattctctgctttggaaaggctgaca
acattggagttactggaagtgcgtagacagcaagaggaagaggagaggaagcggcaacct
ccgtctccagagccgaggacgaaagtttcagaagaaacagattcacagcaatgggatgct
tcaaaaggagaacaagtttcccaaaatggtttgcctgctgaacagggatctccacggatg
gcagaaaccgtggaaacaagcgaaatggtcaatggagctacagagcagagaacgagttca
aaagaatccagccccatcccctccccaacctcagatcgcaaagccaagacttctgtccag
gcacagacggcagccaccttaccagccaaaacccaggagaccccctcggctcagatggaa
ggcttcttgaatcggaagcacgagtgggaggctcacaataagaaggcttcgagcaggtcg
tggcataatgtctactgtgtgattaataaccaagagatgggcttctacaaagactcaaag
gctgctagttctggtattccctatcacagtgagatccctgtgagtttaaaagaagcatcc
tgtgaagtagcagttgactacaaaaagaaaaaacacgtattcaagctacgactaaatgat
ggcaatgagtacctcttccaagccaaagatgatgaggaaatgaattcctggatccaggcc
atcacttccgccatctcctctgacaaaggtgaaatctccgtcagcacccagagcactcca
gcatccagccgtgcccagaccttgccagccagtgttaccatcaccagcgaatccagccct
ggcaagcgtgagaaagacaaagagaaagacaaagagaaacggtttagcctctttggaaaa
aagaaatga
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integrated database retrieval system
