Gracilinanus agilis (agile gracile opossum): 123236863
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Entry
123236863 CDS
T07702
Symbol
CCDC88A
Name
(RefSeq) girdin
KO
K25392
girdin
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123236863 (CCDC88A)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123236863 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
Motif
Other DBs
NCBI-GeneID:
123236863
NCBI-ProteinID:
XP_044519282
LinkDB
All DBs
Position
2:complement(106358359..106522830)
Genome browser
AA seq
1872 aa
AA seq
DB search
MENEIFTPLLEHFMSSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIQNLSILVRQIKSYYQETLQQLIMMSLPNILTIGKNPFSEQGTEE
IKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKATIAAHIQEVTHNQENVFDLQWMDVND
ISQEELEPLLKNMASHLKRLIDERDEHTETIIELSEERDGIHFLPHASSAQSPCSSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDSKQELEQMETELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESKVSRYKERLHDIEFYKARVEELKEDNQVLLETKS
MLEDQLEGTRTRSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMSLEMAQKQ
SMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLVKTIEELRN
AVDSVESSNSKILKIEKENQRLSKKLEFLENEIIQEKQSLQNCQNLSRDLMKEKAQLEKT
IETLHENSERQIKILEQENEHLNQTVTSLRQRSQISAEARVKDIEKENKILHESIKETSS
KLNKIEFEKRQIKKELEHYKERGERTEELENELHHLEKENESLQKKITNLKITCEKTETL
ELENSELEVENRKLKKTLDGLKNLTFQLESLEKENSQLDEENLELRRTVESLKCASMKMA
QLQLENKELESEKDQLKKTIELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQELETENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDITLEENNTKIGNLEKENRSLFKETNVFKESCIRLKELEKENKELVKRATIDK
KTLITLREDLVNEKLKTQQMNNDLEKLTHELEKIGLNKERLLSDEQSTDDSRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNFNQQLRQELKTVKKNYEALKQRQEEERMLQNSP
PRSGDDTKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQA
QILVLQRQTINLQEQNTTLQTQNAKLQVENSTLNSQNTSITSQNSQLSAQQHTLENENDS
IVKEREELKSLYDALVKDHEKLESLHERQASEYESLISKHGTLKSVHKNLEVEHKDLEDR
YNQLLKQKGQLEELEKMLKVEQEKMMQENKKHETVATEYKILRGENDRLNHTYNQLLKET
EVLQTDHKNLKSQLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLE
EENRHLLDQIQTLMLQNKTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQY
KFYDPSPPRRRGNWITLKMRKLIKSKKDVNRERMKSLTLTPTRSESSEGFLQLPHQDSQD
SSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMVL
AGGQWTGSSENLEVPDDISTGKRRKELGAMAFSTTAVNFATVNSSTGFRSKQLVNNKDAT
SFEDVSPQGISDDSSTGSRAHASRPASLDSGRTSTSNSNNNASLHDVKAGAVNSQSRPQS
HSSGEFSLLQEHEAWSSSSSSPIQYLKRYTRSSPVLQHKMPETLDSQAKMKAGSPGSEVV
TLQQFLEESNKLTSIQMKSSSQENLLDEVMKSLSVSPDFMGREKAVSCGLVRSVSGKTIA
DFSDGRSTKADQLVRPSPRKPEDSYFIGSPGKLTSSSTQGKVKLVKETSVSQRQSKDSNP
YATLPRASSVISTAEGTTRRTSIHDFLSKDSRQPVSVDPSPSTADNTPSTSNVDTIQESR
NSKSRSREQQSS
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgagatttttactccactcctggaacatttcatgtccagtcccttggtcact
tgggttaaaacatttggacctctggccgcaggaaatgggaccaatctggatgaatatgta
gccctggtggatggtgtattcttgaatcaggttatgctacaaattaatcctaaatcagag
agtcagcgagtaaataaaaaagtcaacaatgatgcctcacttagaattcaaaatttatcc
attttggtgagacaaatcaaatcttattaccaggagactttgcagcaattgatcatgatg
tctttgccaaatatcttaaccattggcaaaaatcccttttctgaacaaggtacagaagaa
attaaaaagctactgttacttttacttggttgtgctgttcagtgtcagaaaaaagaagaa
ttcatcgaacggatccaaggtttagattttgacacaaaagcaacaattgccgcacacatt
caagaggtaacgcataatcaggaaaatgtatttgatctgcaatggatggacgtgaatgat
atttctcaggaagaacttgagccactgttgaaaaatatggcatcacatttaaaaagactt
atagatgagagagatgaacacacagagaccattatagaactctctgaggagcgggatggt
attcattttctacctcatgcctcatcagcacagtcaccttgcagctctccaggcatgaag
cggactgaaagtagacaacatttatcagtagaactggcagatgctaaggcaaagataaga
aggctcaggcaggagttggaggaaaagactgaacaattgttagactctaaacaagaactt
gaacagatggagacagaactaaagagacttcaacaagagaatatgaacttgctttcggat
gctcgctccgccagagtataccgagatgaattggatgcacttcgggaaaaagcaatcaga
gttgacaagcttgaaagcaaagtcagcagatataaagagaggctacatgatattgaattt
tataaagcaagagttgaggaactaaaagaagacaatcaagtattattggaaacaaaaagt
atgttagaagaccaactagaaggaacccgcactcgttctgataaattacatgaattagaa
aaagagaacttacaactgaaggctaaactacatgatatggagatggaacgtgatatggat
agaaaaaagattgaagagctaatggaagaaaatatgagtttggaaatggcacagaaacaa
agtatggatgagtcattacatcttggctgggaattggaacagatatcaagaactagtgaa
ctctcagaagcaccacagaaatctctgggccatgaggtgaatgaattaacatcaagtaga
ttattgaaattagaaatggaaaatcagagtttggtgaagaccatagaagagcttcgaaat
gccgtggattctgtagaaagcagtaattccaaaattctgaaaattgaaaaagaaaaccaa
agacttagtaagaagctggaatttcttgagaatgaaattattcaagaaaagcaaagtctt
cagaattgtcaaaatctgagcagggatctaatgaaggagaaagcacagttggaaaagacc
attgaaacacttcatgaaaattcagaaagacagattaaaatactggaacaggagaatgag
catttgaatcaaactgtaacatccttaaggcagcgatcacaaataagtgctgaagcaagg
gtgaaagacattgagaaagaaaataaaatccttcatgaatctattaaagaaacaagcagc
aagttaaacaaaattgaatttgaaaagcgacaaattaaaaaagaattggaacattacaaa
gaaagaggagaaagaacagaagaacttgagaatgagttgcatcatcttgaaaaggaaaat
gaatcattacaaaaaaagataactaatttgaaaattacctgtgagaaaactgagacctta
gagctagaaaattctgaactggaagtagaaaacagaaagttgaagaagacattagatggc
ttaaaaaaccttacttttcaactggagtccttagagaaagaaaattctcaacttgatgaa
gaaaacttagaattaaggaggacagtggaatctttgaaatgtgcaagcatgaaaatggct
caactacagttagaaaataaagaattagaaagtgaaaaagatcaacttaagaaaaccata
gaactcatgaaagcttctttcaagaaaacagaacgtttagaagttagctaccagggttta
gatactgaaaaccaaagactgcagaaggctctagagaatagcaataaaaaaattcagcag
ttagaaagtgaactacaagaattagaaacagaaaaccaaacattacagaaaaatctggaa
gagttaaaaatatccagtaaacggttagaacaattggaaaaagaaaacaaactactagag
caggagacttctcaactagaaaaagataagaaacagctagagaaggagaataagagactc
cgacaacaggctgaaattaaagatatcacactggaagaaaataatactaaaattggaaat
cttgaaaaagaaaacagaagtcttttcaaagaaacaaatgtatttaaagaatcctgtatt
cgtctcaaagaattagagaaagaaaataaagaacttgtgaaaagagcaactattgacaaa
aaaactcttattactttacgtgaggatttggtgaatgaaaaattgaagactcaacaaatg
aataatgatctggaaaaacttacccatgaacttgaaaagatagggttaaataaagaacgt
ctcttgagtgatgaacaaagtaccgatgatagcaggtataagcttttggagtcaaaatta
gagtctacactaaagaaatccctggaaataaaggaagaaaaaattgctgctttggaagct
cgattagaagaatcaactaattttaaccagcaactacgccaagaacttaaaacagtgaaa
aagaattatgaagctcttaaacaacggcaagaggaagaaagaatgctgcagaattctcct
ccaagatctggtgatgatactaaatgggaaagagaaagtcaagagacaactagagagctt
ttgaaggttaaagacaggttaattgaggtggaacggaataatgctaccctgcaagcagag
aaacaagcattgaaaactcagttgaagcaacttgagacacagaacaataatctacaggcc
cagattcttgtacttcagcggcagactattaatttacaagaacaaaatactacccttcag
actcagaatgccaagcttcaggtggaaaactctacccttaattcccaaaatacctcaatt
acgagccagaattcccaactatctgctcagcagcacacgttagaaaatgaaaatgactct
atagtcaaagaaagggaagagttgaagtctctctatgatgcactggttaaagaccatgaa
aaattggaaagtcttcatgaacgccaagcttctgagtatgagtctctcatttccaaacat
ggaacactaaaatctgtacacaaaaatcttgaggtagaacataaggacctcgaagatcgt
tataaccagttactgaaacagaaaggacaattagaagaattggaaaaaatgctcaaagtt
gagcaagagaaaatgatgcaagaaaataagaaacatgaaactgtagctacagaatataaa
atacttcgaggtgaaaatgataggttgaatcacacatataatcagctgctgaaagagact
gaagttttacaaactgaccacaagaatttaaagagccagttaaacaattctaaattggaa
cagacaagattagaagctgaattttcaaagctaaaggagcaataccaacagctggacatt
acatccactaaactgaataatcagtgtgagttacttagccaacttaaaggaaacttagaa
gaagaaaacagacatctactagatcaaattcagacattaatgctccaaaataaaacatta
ttggaacagaatatggaaagcaaggatctttttcatgttgaacaaagacagtacattgat
aaattaaatgaattaagacgacaaaaggagaaattagaagaaaagattatggatcagtac
aaattttatgacccgtcacctcctagaaggagaggcaactggattactttaaaaatgagg
aaacttataaagtctaagaaagatgttaatcgggaacgtatgaagtctctaacattaaca
cccacccgttcagaatccagtgaaggatttcttcagcttccccatcaagacagccaagat
agttcatctgtgggttcaaattctctagaagatgggcaaaccttggggaccaagaaaagc
agcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagacaaa
atgaaggcctgctaccgtcgctccatgtccatgaatgacctggtgcaatccatggtccta
gcaggaggacaatggacaggtagttctgagaatttggaggttcctgatgatatttctacg
ggtaaaaggagaaaagaattgggagctatggccttctctactacagctgtcaactttgca
actgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatgccaca
tcatttgaagatgtaagtccacaaggtattagtgatgattctagtactggatcaagagct
catgcttccaggccggccagtcttgatagtggtagaacatccactagtaatagcaataat
aatgcttcactccatgatgtcaaagcaggtgcagttaatagtcaaagcagacctcaaagc
catagcagtggagaatttagcctacttcaagaacatgaggcatggtccagtagtagcagc
agtccaatccagtacttgaagcggtataccagatcaagtcctgtgctccagcataaaatg
ccagaaaccctagatagccaagccaagatgaaggctggttcccctgggagtgaagtggtt
actctacagcagtttttagaagaaagcaacaagcttacctcaatacagatgaagtcttca
agccaagaaaatcttttagatgaagtaatgaaaagtttatctgtctctcctgattttatg
ggaagagaaaaggcagttagctgtggtcttgttaggtcagtaagtggaaaaaccatagct
gacttttctgatggacgatcaactaaggctgaccagctcgtgaggcccagtcctcgaaag
cctgaagattcttacttcattggttctccaggaaaacttacgtcatcaagcactcaagga
aaggtcaagttagtgaaagaaacctctgtgtcacaacgacaatcaaaagatagtaaccca
tatgctactttacctcgtgcaagcagtgtcatctctacagctgagggcactactcgaagg
acaagcattcatgactttttgtccaaggacagtagacagcctgtgtcagttgatccatca
ccatctacagctgataacaccccatcaacatctaatgtggacactatacaagaaagcagg
aattcaaaaagcaggtctagggagcaacaaagctcctaa
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integrated database retrieval system
