Gracilinanus agilis (agile gracile opossum): 123237076
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Entry
123237076 CDS
T07702
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123237076 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123237076 (TRIM54)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123237076 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
CoiA_N
DUF349
UvrD_C
SpoIISA_toxin
GH123_cat
DUF1421
DD_DDX21-DDX50
Zn_ribbon_FGT1_2
FlgN
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123237076
NCBI-ProteinID:
XP_044519657
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All DBs
Position
2:complement(232070892..232106758)
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AA seq
360 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPNIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLGQRFETLCAVLEERKAELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIKKVGDMAKVELAG
RPEPGYESMEQFSVNVEHVAEMLRTIDFQTGGSGEEEEDELVLEGEDGSAAGAEEERLEA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctgggagatgcacacagcatggataacctg
gagaagcaactcatctgccctatctgcctggagatgttctccaagccagtggtgatcctg
ccctgccaacacaacctgtgccgcaagtgtgccaatgacgtcttccaggcctcaaatcct
ctgtggcaatcccggggttccaccacagtgtcctcagggggacggttccgctgcccatcc
tgtaggcatgaggtggttctcgacagacatggtgtctatggactgcagcgcaacctgctg
gtggaaaatatcattgacatttacaaacaagaatcttcaaggcccttgcattctaaggca
gagcagcacctaatgtgtgaggagcatgaggaagagaagattaacatctattgcctgagt
tgtgaagtgcccacctgttccctctgcaaggtatttggagctcataaggactgtgaagtg
gcaccactgcccaacatctacaaacgccagaagagtgagctgagcgatggcattgccatg
ctggtggctggaaacgatcgggtccaggcagtcattactcagatggaagaggtgtgccag
actattgaagacaacagccgcaggcagaagcaactcctgggacagaggtttgagacattg
tgtgcagtgttggaggagaggaaggctgagctgcttcaagccctggctcgggagcaggaa
gaaaagcttcagcgggttcgaggactcattcgtcaatacggagaccacttggaggcttca
tccaagcttgtggagtctgccattcagtctatggaggagccacagatggccctttacctc
cagcaggccaaggagctgattaaaaaggttggggacatggcaaaggtggagttggctggg
cggccagagccaggctatgaaagcatggaacagttctcagtgaatgtggagcacgtggct
gagatgcttcggacgattgacttccagactgggggttctggggaggaagaagaagatgaa
ttggtgttggaaggggaagatggcagtgctgctggggctgaggaagagagactggaggct
tag
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integrated database retrieval system
