Gracilinanus agilis (agile gracile opossum): 123237160
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Entry
123237160 CDS
T07702
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03022
Basal transcription factors
gas05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123237160 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123237160 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123237160 (TAF4)
03036 Chromosome and associated proteins [BR:
gas03036
]
123237160 (TAF4)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123237160 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
123237160 (TAF4)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123237160 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
123237160
NCBI-ProteinID:
XP_044519808
LinkDB
All DBs
Position
2:complement(261350619..261490952)
Genome browser
AA seq
1116 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASTAHHHHHPHKTPEIRAGGAGGLGN
HVVSGSPGGAGVVGAAAAAAAAAAAGANVQTESSKMGLAQEITKAGAGGVQGGVINHNTT
RSQGSALLDGTSSSTSTSSSSTSTSSTTAGSEAAAAAAPGAAAISQGKSVVISSTMATAL
SSRNGKIGTTATVQTLNGSNVVMNSHHSGSAVAFAGTPAAAAAAAAAAPAVTLVNNGPGS
VVLPLGKGNAVNAVLPSASSNTVIQTSSFLSTAVSSSSSPTVISSSSIGSAGPTVALVRP
PIHTAGPAAASVAAATQNGSNTVINSTISVGSLPATAAASVATVGSGVSLQASLVNSQPG
SSMPATATTQVIKSESPKTIVQAVPQQQTLTTSGQSTTGGNMIIGQTMQGGIPNPSGIPP
PPPAPGTPTGMAKGTANTVAQSLPRTPTATTGGIRATLTPTVLAPRLPQPPQNPTNIQNF
QLPPGMVLIRSENGQLLMLPQQTLAQMQAQAHVQTQPQNTMAPRPATPTSAPPVQISTVQ
APGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPVVQPQIVLGGTAQTAALGTASAV
QPGTPQRTVQGATATSAAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL
LDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQA
TTALTAVVLSSSVQRTAGKTAATVTSTLQPPVISLTQPTPVSVSKQGQPTPLVIQQPQKP
GALIRPPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNQLQTVPVVKPAVLPGTKALSTVS
AQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKD
ETFLLSAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKVSETAQQKNLSYK
DDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAK
EMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGSGTEGSGTSTAVPGSSGVGTTRQ
FTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcggatctgctggatgaggttttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctctctggagtcccagctggcggccagcacggcccatcac
caccatcaccctcacaagacgcccgagatccgggccggaggcgccggggggctggggaac
catgttgtgagcggcagccctggaggagccggagtagtaggagccgccgccgccgccgcc
gccgccgccgccgccggtgctaatgtccagacggagagcagcaaaatgggactggcccag
gagatcacaaaagcaggggccggaggagtgcaagggggtgttattaatcacaacacgacc
aggtcccagggttcagctctgctggatggaacctcctcatccacctccaccagcagcagc
agcaccagcactagcagcaccacagcaggatccgaagctgctgctgctgctgctccaggg
gctgctgccatcagtcagggcaaatcggtggtcatcagcagcaccatggcaaccgccttg
tcctccagaaacggcaaaatcggtaccaccgccacggtgcaaactttgaatgggagtaac
gtcgtgatgaactctcaccattcaggaagtgctgttgcttttgctgggactccggctgct
gctgctgctgctgctgctgctgcacctgctgtcaccctagtcaacaacggaccaggatct
gtggtgttgccgctggggaagggaaatgctgtcaatgctgttttgccttcagcttcttca
aacactgtcatccagacttcttctttcctcagcactgctgtatcctcctcttcctcaccc
accgttatctcctcctccagcattggaagtgcaggacctactgtggcactagtgaggcca
ccaattcacacagcaggacctgctgcagcttctgttgctgcagctacccagaatgggagc
aatactgtgatcaattcaactatcagtgtggggagtttgcctgctactgctgctgcttct
gtagctactgtaggttctggagtttcccttcaggcatcccttgtgaacagccaacctggc
tctagtatgccagccacagccaccacacaggtcatcaaatcagagtcccctaaaactata
gtgcaggcagtgcctcagcagcaaacattgacaaccagtggccagtccaccacagggggt
aacatgatcattgggcaaactatgcaaggtggtatccccaatcctagtgggataccacct
cctcctccagctcctgggacccctacagggatggctaaaggcactgccaatacagtggca
caaagtctgccaaggactccaacagctactacaggtggtatccgagcaacgttgactcct
acagttttagcaccccgtctgcctcaaccacctcagaatcctacaaatattcaaaatttt
caactacccccaggtatggtcctcattcgaagtgagaatggacagttattaatgcttcct
caacagaccttggcacagatgcaggcacaggcccatgttcagactcagcctcagaatacc
atggcaccacgccctgcaactcccacaagtgcccctcctgttcagatatcaactgttcag
gctcctggaacaccaattattgcacggcaagtgacaccaactaccataattaagcaagtg
tctcaggcccagacaacggtacagccaactacaacattgcagcgttctcctgtagtacag
cctcagattgttctgggtggtactgcacagacagctgcattaggaacagcctccgctgta
caacctggaactcctcagaggactgtacaaggagccacagcaacttctgctgctgccaca
gaaacaatggaaaatgtgaagaaatgcaagaattttctatcaacattaataaaactggct
tcatctggtaaacagtctacagagacagcagcaaatgtcaaagaattagttcagaacttg
ctggatgggaaaattgaagcggaagattttaccagcaggttatatcgggaacttaattct
tcacctcaaccttacctcgtgcctttcctgaagaggagtttacctgccttgagacagtta
accccagattcggcagctttcatccagcaaagtcagcagcaacagcccacaacacaggca
acaactgccctaacagcagtggtactgagcagctctgttcagcgcacagcagggaaaact
gctgccaccgtcacaagcactcttcagcctccagtaatcagtctgacacagccaacacca
gtcagcgttagcaaacaaggacaacctacacctctggtaatccaacaaccacagaaacca
ggggcattgataagacctccacaggtaacattgacacagacacctatggtagcattgcga
cagccacacaatcgtatcatgctcactactcctcagcaaattcaactaaatcagcttcag
acagttcctgtggtcaaacctgctgtattacctggcaccaaagctctttctactgtttca
gcacaagcggctgctgcacaaaagaataaacttaaagaacctggaggtggttctttcagg
gatgacgatgacattaatgatgttgcatcaatggcaggagtcaacttatcagaggagagt
gcaaggatattggcaacaaattctgaattagtgggcacattaacaagatcttgtaaagat
gaaacctttctcctttcagcacctttacaaagaaggatattagaaataggtaaaaagcat
ggaataacagaactgcatcctgatgtagtaagttatgtgtcacatgcaacacagcaacgg
ctacagaaccttgtagaaaaagtatcagaaacagcccaacaaaagaatctttcttataag
gatgatgaaagatatgaacaggcaagtgatgtccgggcacagctcaaattctttgaacag
cttgatcaaattgaaaaacaaaggaaagatgaacaagagagagaaattttaatgcgggcg
gcaaagtctcggtctaggcaagaagatccagaacaacttaggttgaaacagaaggcaaag
gagatgcagcaacaagagctagcacagatgaggcaaagggatgccaacttaactgcatta
gcagcaattggtcctaggaaaaaaaggaaagtggattctccaggacctggatcagggaca
gagggttctggaacaagtacagcagtcccgggcagttctggagttggaacgactagacag
tttacgcgacaaaggataacgcgggtcaacctcagggacctcatattttgtttagaaaat
gagcgagagacaagccattcactattgctatacaaagcattccttaagtaa
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