Gracilinanus agilis (agile gracile opossum): 123237215
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Entry
123237215 CDS
T07702
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
123237215 (TTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123237215 (TTF1)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
123237215 (TTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
123237215
NCBI-ProteinID:
XP_044519893
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Position
2:279195495..279232589
Genome browser
AA seq
1382 aa
AA seq
DB search
MDGESCRFQMNTPDFVKKKQRESSSTEERNKELNKKELSDSLLLFDDHSQRTTGHTDPQV
PSSTFIRSEINNDNEILKDIATVKKRKKKNPVTCDIQEEMGVICVLVDKENIESMEREKF
RKDVDIVYIDRKKGKELPKSSEKELHSISEADKNALEDPDHKVKDKLHKVVDRKRKFSDS
QKGSHESSCTQEQESLLSLERDGEIRELLVSTDKMKLSKSKDRRKSSSNKNHMKSEGFSV
PDENLVTMHTNGSQVVNEVNALEDDRTLQEERVKSVRKKKKKETTSHENDQLSVHDFSIP
NVNSINISSDQMKTGNSVNAKIQEGNSTLSENFVESVRKKKKKQSTSSKNDRALAGNFLV
SEKSSVDMPSDQVKVFGVINSTETLEGVSIFGEGNAESIRKKGKKRKMSNENRLPVDDFS
GPDVNSMDIPSEQMKISNSVNDVKTTEGDNTLSESNVESVRKKKKKQKTSSKNEQAVAND
FSVPEMSSVNMPSEQLKVVDSANCSIETQEDDSAFVESVREKKRKRKISNKSKEAVTDFS
VAGSIDVSSNNQMKKTCVSIETSKDGSTFNENNGESFRKKKKKQKTSPENDKAFASDFSI
PGQSSVDRLSDHMKMCDKINDTEMLESDSTFIENNEIFARKKKKKQKTSKNDQAPAVDFL
VPCTNSMDRPSDQDQIRTGDNVNTDTMEGGSKNNEESSVRKKKKKQKTKDKSEQEPTGDF
SVPDPNSVSRPSDHTKAHSKINNTEPLENEKTLIESNGESVRKKKKKPKSSTKNEQELAD
DSSVPGMTSMARPSDHMKMAKRVNTETAESDTSLNKSSGESVRKKKKKQKPLAKNEQVLT
DDFSVPGPNSLDGPSDLVKISSDINNTDILEGDSTLDESNVEPGRKKRRKRKTSATKDQE
LVGDFSVPGTSSIGSPSSQRKTVHLESGNTLNKRLKDIQRKKKKEPHSEKTSVETEERLL
STNEERRHSEADDNSDLENMSEDLIDLDVDLETAVKKLQEFIPNVKERAAATIKRMYRDD
LKRFQRFKEQDIPIRFGKFSAKENEQLRKNVEDFLSLTGIETADKLLHTDRYPEEKSVIT
DLKRKHQFRCHIGEGIPRPWKLVYYRAKKMFDINNYKGRYSKKDTQKLKKYQSIHGNDWK
KIGEMVSRSSLSVALKFSQINNKINHGPWSKAETRRLIKAVEEVILKKLSPKEVEDIDSR
LQEDSSPESLSVLRKQLYKGISWVEVEAKVETRNWMQCKSKWPEILTKRMTNGKVVYRGT
NALRAKINLIERLYQTNVQEANEINWEHLAGAIGDVPPSYVQSKFYKLKATCVPLWQKKT
FPEIIDYLYETSRPLLEQRLQRKLKKEGTTVQEPEVPKQSFRFKDIFFCESDSEEEDREE
SR
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaatcttgcagatttcaaatgaatactccagattttgtgaagaaaaaacaa
agagaaagctcttcaactgaggagaggaataaagaacttaacaagaaagaactcagtgac
tctctcctattgtttgatgaccattctcagaggactacaggtcacacagatccccaggtc
cccagttctacttttatcagatcagaaatcaacaatgataacgaaatactaaaggatatt
gctacagtgaaaaaaaggaaaaagaaaaatccagtaacttgtgatatacaggaggaaatg
ggagtaatatgtgtccttgtagataaagaaaatattgagagtatggaaagagagaagttt
agaaaagatgttgatattgtttatatagataggaaaaaagggaaagagctaccaaaatca
agtgaaaaagaactgcattcaatttctgaagctgataaaaatgcgttagaagatccagat
cataaagttaaggacaaactccataaagtcgttgataggaaaagaaaattcagtgattca
cagaaaggctctcatgagagctcctgtacccaagaacaagaatccctccttagtttagaa
agagatggtgagattagggaactgttggtatctactgataaaatgaaattgtcaaagtcc
aaggacagaaggaaaagttcatctaataaaaaccatatgaaatctgagggattttccgtg
cctgatgaaaaccttgtgaccatgcacaccaatgggtcacaggtggtcaatgaagttaat
gcattagaggatgataggacccttcaggaagagagagtgaaatctgtcaggaaaaagaag
aaaaaggaaacaacctcacatgagaatgatcagctatctgttcatgatttttcaattccc
aatgtgaactctataaatatatcatctgaccagatgaaaacaggtaatagtgttaatgca
aagattcaggagggtaatagcactcttagtgaaaactttgtggaatcagtcagaaaaaag
aaaaagaagcaaagtacttcatctaaaaatgatcgagcacttgctggcaattttttagtg
tctgagaaaagctctgtggatatgccttctgaccaagtgaaagtatttggtgtaattaat
agcactgaaaccttagaaggtgttagcatttttggtgaaggtaatgcggaatctatcagg
aaaaagggaaaaaaaagaaagatgtcaaatgaaaataggttgcctgtggatgatttttca
gggcctgatgtaaactctatggatattccatctgagcaaatgaaaataagtaatagtgtt
aatgatgtcaagaccacagagggtgataacacccttagtgaaagcaatgtggaatctgta
agaaaaaagaaaaagaagcaaaaaacttcatctaaaaatgaacaagcagttgctaatgat
ttttcagtgcctgagatgagttctgtgaatatgccttctgaacaattgaaagtggttgat
tcagctaattgtagcattgagactcaggaggatgatagtgcttttgtggaatctgttagg
gaaaagaagagaaagagaaagatttcaaataaaagtaaggaggcagttactgatttttca
gtggctggatctatagatgtgtcatctaataaccaaatgaaaaaaacttgtgttagcatt
gaaacttcaaaggatggtagtacctttaatgaaaataatggagaatccttcaggaaaaaa
aagaagaagcagaaaacttccccagaaaatgataaggcatttgctagtgacttttcgata
cctggtcagagctctgtagatagactttctgaccatatgaaaatgtgcgataagattaat
gatactgagatgctggagagtgatagtacctttattgaaaacaatgagatatttgccaga
aaaaagaaaaagaaacaaaagacttctaaaaatgatcaggctcctgctgttgatttttta
gttccttgtacaaactcaatggataggccttctgaccaagaccaaataagaacaggtgat
aatgttaacacggatactatggagggtggtagtaaaaataatgaggaatcatctgtcagg
aaaaagaaaaagaaacaaaagactaaagataaaagtgagcaagaacctactggtgacttt
tcagtacctgatccaaattctgtgagtaggccttctgaccatacaaaagctcatagtaag
attaataacactgagccactagagaatgagaagacccttattgaaagcaatggggaatct
gtccggaaaaagaaaaagaagccaaagtcttcaactaaaaatgaacaggaacttgctgat
gactcttcagttcctggcatgacctctatggctaggccctctgaccatatgaaaatggct
aaaagagttaacactgagactgcggaaagtgataccagccttaataaaagcagtggagaa
tctgtcaggaaaaagaaaaaaaagcaaaagcctttagccaaaaatgagcaggtccttact
gatgacttttcagtacccggtccaaattctttggatgggccttctgaccttgtgaagata
agtagtgatattaacaacactgacattttagagggtgatagcactctcgatgaaagcaat
gtggaacctggaaggaaaaagagaagaaagagaaaaacttcggctacaaaggatcaggaa
cttgtgggtgacttttcagttcctggtacaagttccataggttcaccttctagccagagg
aaaacagtccatttagagagtggcaacactcttaataaaagactgaaagacattcagaga
aagaagaagaaagagccccactcagaaaaaacaagtgtagaaactgaggagagattacta
tctacaaatgaggaaagaaggcactcagaagcggatgacaattcagatttggaaaatatg
tctgaggatttgatagatctggatgttgacttggagactgctgtgaagaaactccaagag
tttattcctaatgtgaaggaaagggcagccgccacaataaagcgaatgtacagggatgac
ttaaaacggtttcaacgatttaaagaacaagatatccctattagatttggcaagttttct
gcaaaggaaaacgaacagttacggaaaaatgtggaagattttttatcattgactggaatt
gagactgcagataaattgctgcatacagacaggtatccagaggagaaatctgttatcaca
gacttaaaaagaaagcaccaatttagatgccacattggtgaaggtattccccggccatgg
aaattagtatattatagagcaaaaaaaatgtttgatatcaacaattataaaggcagatat
agtaaaaaagatactcagaagttaaagaagtaccaatccatacatggaaatgattggaaa
aagattggtgagatggtgtcccgcagtagcctctctgttgcactgaaattctctcagatt
aacaataagataaatcatggtccttggagtaaagcagaaactcgaagactgattaaagct
gttgaagaagtgattctaaagaagttgtcaccaaaggaagtagaagacatagactctcgg
ctccaagaagacagttccccagaatctttatcagttttgcggaaacaactctacaaaggc
atatcctgggtagaagtagaagccaaagtagaaacaagaaattggatgcagtgtaaaagt
aagtggcccgaaattctaaccaagcggatgaccaatgggaaggttgtgtaccgtgggaca
aatgctctacgtgccaaaatcaatcttattgaaaggctatatcaaacaaatgtacaagaa
gctaatgaaattaattgggaacatcttgctggtgcaattggagatgttcctccatcctat
gttcaatctaaattttataaactaaaagctacctgtgtccctctttggcagaagaagaca
ttcccagaaattatagactacctctatgagactagccgcccattactggaacaaaggtta
cagaggaaactgaagaaagaaggcacaactgtccaggaacctgaggtgccaaaacaatca
tttcgattcaaagatatctttttttgtgaaagtgacagtgaagaagaagatagagaggaa
agcagataa
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