Gracilinanus agilis (agile gracile opossum): 123237294
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Entry
123237294 CDS
T07702
Symbol
CX3CL1
Name
(RefSeq) fractalkine
KO
K05508
C-X3-C motif chemokine 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04060
Cytokine-cytokine receptor interaction
gas04061
Viral protein interaction with cytokine and cytokine receptor
gas04062
Chemokine signaling pathway
gas04148
Efferocytosis
gas04668
TNF signaling pathway
gas05163
Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
123237294 (CX3CL1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123237294 (CX3CL1)
04061 Viral protein interaction with cytokine and cytokine receptor
123237294 (CX3CL1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123237294 (CX3CL1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
123237294 (CX3CL1)
09160 Human Diseases
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
123237294 (CX3CL1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gas04052
]
123237294 (CX3CL1)
Cytokines and neuropeptides [BR:
gas04052
]
Cytokines
Chemokines
123237294 (CX3CL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
123237294
NCBI-ProteinID:
XP_044520060
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All DBs
Position
2:complement(289911438..289933275)
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AA seq
414 aa
AA seq
DB search
MGSWSPAKLLCLSVLGHLVSLLAGQHFSMNKCTHECPPLNRDMPQIPNHRLKNYTETSPS
CRPKAVIFITVRNKIICAHPDVKWVQEAIRFLDESAAAQKMTGGKEDRGKFEKLTGVTGP
PTTQVDGGESTVPATTLVPKAANTPVSTTISPSPSPTPAFSEEEMALTTSPGLPASIFSS
SVSFSDSLLVGSTSSMTGEKNLDAVLVFQGTETSSIKAISTRMTPILESSDSGPLAKGEI
SEEMPTISYPGEEVMGKSEDHSEPVEERDFTTENPIISEEASTVLTLTNPFSNLATDVAE
HYFPVSIPASESPNKGLVSRTNLPSKFEEPAHATVDPQRLEVAITAIPDSPQAATRRQAF
GLLAFLGFLFCLGVAMFAYQSLQSCPRRMAGEVVEGLRYIPRSCGSNSYVLVPV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggtcctggtcccccgcgaagctgctctgcctgagtgtgctcgggcacctggtgtcc
ctgctggcaggacaacattttagcatgaataagtgtacccacgaatgccccccattgaac
agagatatgccccaaattccaaatcatcgcttaaagaattatactgagacatcgccatct
tgccgcccaaaagctgtcatattcattactgtaaggaacaaaatcatatgtgctcatcca
gatgtgaaatgggtacaagaagcaattcggtttctggatgaaagtgctgctgctcagaaa
atgaccggaggaaaggaggatagaggcaaatttgaaaaattaacaggagtaacaggaccc
ccgaccacccaggtagatggtggagagagcaccgttccagctaccaccttggttccaaaa
gctgccaatacccctgtctcaacaaccatcagtcctagcccaagcccgacgcctgccttc
tcggaggaagaaatggccttgacgacctccccagggctgccggccagcatatttagttca
tcagtgtcgttctctgactcccttctagtgggatccacctcatccatgacgggggaaaag
aatctagacgctgtgctagttttccagggaactgagacttccagtataaaggctatatct
acaagaatgactccaattcttgagagttctgattcaggccccttggctaaaggggagata
tctgaggagatgcctactatttcttaccctggggaggaggttatgggaaagtcagaggac
cactctgagcctgtggaggagagggattttacgactgaaaatcccattattagtgaagag
gcaagcactgttttaactctcacaaaccccttctccaacttggctaccgatgttgcagaa
cactacttccctgtctctatccctgcctcagaaagccccaataaagggctggtttcaaga
accaacctaccttccaaatttgaagagcctgcccatgccacggttgatccccaaaggcta
gaagttgccatcacagccatcccggactctccacaggcagcaacccgaaggcaggctttt
ggcctattggccttcctgggtttcctcttttgcttaggggtggccatgtttgcctatcag
agcctccagagctgccctcgtaggatggcgggagaagtggtcgaggggctccgttatatt
ccaaggagctgtgggagtaactcctatgtcctggtccctgtgtga
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