Gracilinanus agilis (agile gracile opossum): 123237311
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Entry
123237311 CDS
T07702
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123237311 (CHD9)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123237311 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
123237311
NCBI-ProteinID:
XP_044520084
LinkDB
All DBs
Position
2:complement(295358349..295532445)
Genome browser
AA seq
2897 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEDLSDDAFVQPGPVSLVDELNLGVEFEPLHIDSLNHVQDTQ
TPQKMTDFEQLNQFEPLKLHQVNQSFNSPVENVLSPHSQFNCSPVHPPNQSNGLFPDVAD
GSPMWGHQTSVSSQNGSPFHQQGHSQSMQQNKSFVAHPDFALFQVNEQQQQCTSLQSQQN
RNSNNPGQENLSQAKNFMEVNLSGPHRVHVTHPSQIPSASTSQQSLSMQQFSPPSNASVH
FCGNHQDGNFNGQSPNMTPCSVNNSQQFSSHYSFSSNHISPNSLLQASTVLASSHSAHTL
SDFTGSNAFIAQTGTKQESTQHILNSNSSLNSNNFEMLHSAHPQGNFSSSKLSPVHMNFP
DPVGSASHMGHFNDHVETNGFSSLEDNLLHQVGSQTEEFTGLDPEDLLQEGLLPQFDDSA
FGQDSSSHVLEHDLDPQLTPQLLTQPPDVARTQSQSQVHSWHLSVSNHQHSHDREHSSLQ
HQPPSSKKTDGSGMYAKLQNTQVRAMSEKKQKRKVESESKQEKANRIISEAIAKAKERGE
RNIPRVMSPENFPSVSAEGKEEKKGRRMKSKPKDKESKKTKTCSSTKLKEKTKIGKLIIT
LGKKQKRKNVSSDEMSDAEQISQRPFKDEDSQKRRSNRQVKRKKYAEDTEGKQSEEEAKV
SVKIKKSSASLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGMMIDAEEFFVKY
KNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLE
VSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRHLDRP
PPNTWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLY
EILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSLVSRQMIQQYEMYFRDSQG
RIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH
KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQANVPNLVNTMMEL
RKCCNHPYLIKGAEEKILGEFKETHNPAAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHK
VLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRA
GGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRA
SLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDID
QILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDALSGR
NSLVIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSSGYGRTECFRVEK
NLLVYGWGRWREILAHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPT
EDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHI
KHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGVEASDIDVWVPEPDHSEVPAEWWDLDAD
KSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPA
PAIFKDDLEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQ
AQQIQPAFSVQANVMQTPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTFGVVFDPD
RGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEER
ASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPIWWECGTHDRDLLIGAAKHGVS
RTDYHILRDPELSFMAAQRNYSQNKMTHSRTSTPLIQQYQMALSASPLSSQPRLLDAKGN
ALEDTKVKNESLKEEPQSSGEESVSSEEIRTGIKSEPLSPKNGVLPQTTGDPKSGGKVET
DRRMVAARTEPLTPNPASKKQRVSKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSH
SRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSEESDSEEEAQKREGTTHMKSYDEESVA
SLSTIQDETQDSFQMNNGTPNSAYILQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRGYEGSAVASFYTTKLLDSPGAAADTGEPCLLTPPSAGAREERDQSTQMSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPLENEDGSLGQQQYLARLRELQNASETSLVNFP
KSMPISGTSSQPAIGANGVILENQPIVKKRRGRRKNVEDVDILLLNRNKPPNHVTIGITT
SQITPGINPALSYAQSQGILDIENPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVE
DLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYDRILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAATAANVSGNPLLGNGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPASLSGG
EVNKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPAESVAEEKKANDSKEPDGRKERTESQN
SDNVGENSVSSSPSTSSSAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQ
SNIFDVQNNKNNDLDSAKPVEEKEEDSRVRDQEEKGETEPSSLNENSTDEGSEKADASSG
SESTSSSSEESDSSNED
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaatgatggacttctttgatgatgccaatctttttggtgagactttagaa
gatttgtcagatgatgcctttgtacaaccaggacctgtttcacttgttgatgaattgaac
ttgggtgtagaatttgaacctttgcacatagattcattgaaccatgtccaggatactcaa
acaccacagaagatgactgattttgagcagttaaatcagttcgagccactgaaacttcac
caagttaatcagtcattcaatagcccagtggaaaatgtgttatcaccacattctcagttt
aattgttccccagtccacccaccaaatcaatctaatggcttgtttccagatgttgctgat
ggcagtccaatgtggggtcatcagactagtgtttcaagtcaaaatgggtctccttttcac
caacaaggacactcgcagtctatgcagcaaaataaaagctttgtagcacaccctgacttt
gccttatttcaggtcaatgaacaacagcaacagtgtacatcactacagtcacaacaaaac
agaaatagtaataacccagggcaagaaaatctaagccaagccaaaaactttatggaggtt
aatctttctggtccacatagagtccatgttacccacccatctcaaattcctagtgcatca
acttcacaacagtctctctccatgcaacagttttctccaccatcaaatgcttcagtgcac
ttctgtggcaatcaccaagatgggaattttaatggacagtctccaaatatgactccttgt
tctgtcaataattcacaacagttttcttcacattattccttctccagtaatcacatatct
ccaaacagtcttcttcaggcctctacagttcttgcatctagtcattcagctcatacttta
tctgattttactggaagcaatgcctttatagctcagacggggaccaagcaggaatctacc
cagcatattttaaactcaaattcatctttgaattcaaataattttgaaatgttgcattca
gcacatcctcagggtaacttcagcagctcaaaattatctcctgtacacatgaatttccca
gatcctgttggttctgcttctcacatgggacatttcaatgatcatgtagaaacaaatggt
ttttcatctctagaagataatttacttcatcaagtaggatctcaaactgaggaattcaca
ggacttgatccagaagatcttcttcaggagggtctccttccccaatttgatgactcagca
tttgggcaagatagttcaagtcatgttttagaacatgaccttgatccacaacttacccca
cagcttttaacacaacctccagatgtggctcgaactcagtctcaaagtcaggtacactcg
tggcatttgtcagtttctaatcatcaacactcacatgacagagaacattcatccttgcaa
caccagcctccttcttccaaaaagactgatggttctgggatgtatgcaaagttacagaat
acccaggtgagagccatgtctgagaagaagcagaaaagaaaggtggaatccgaaagcaag
caagaaaaggctaatcgaattatatcagaggcaatagcgaaagcaaaggaacgaggagaa
cgaaacattcctcgagtaatgagccctgaaaactttcccagtgtttcagctgaaggaaaa
gaagaaaagaaaggtagaagaatgaagtctaagccaaaagacaaggaaagcaagaaaaca
aaaacttgttcttcaactaagttaaaagagaagacaaaaattgggaagctcattattact
ttgggtaagaagcaaaaaagaaagaatgtgtcttcagatgaaatgtctgatgctgagcag
atttcacagcgtccattcaaagatgaagattctcaaaagagaagatcgaatcgtcaagtt
aaaaggaaaaagtatgcagaagatacagaaggaaaacagtcagaagaagaagcaaaagtt
tctgtgaagatcaaaaaaagttcagcttctttacctgctgaacaacctttgcagttattt
gtggagaatccaagtgaagaagatgctgcaattgtggacaaaatactgtcttcaaggatt
gtaaagaaggaaatatcacctggaatgatgattgatgcagaagaattttttgtgaaatac
aagaattactcctaccttcactgtgagtgggccacagaacagcaacttctaaaagataaa
agaatacagcaaaaaatcaaaagattcaagttgagacaagcacaacgagcacattttttt
gcagatatggaagaagaaccttttaatcctgactatgttgaagtagatagagtgttagaa
gtttctttttgtgaggataaggatactggcgagcctgtaatttactacttagtaaaatgg
tgttcattgccatatgaagatagtacatgggaactgaaagaggatgtagatcaagcaaaa
atagaagaatttgaacaattgcaagcctcaaggcctgattctaggcacttggaccgtcct
cctcctaacacttggaaaaaaatagagcattccagagaatataaaaacggcaaccaactc
agggaatatcaattggaaggactcaactggctcttgtttaattggtacaatagacgaaac
tgcatcttagctgatgaaatgggtcttggcaaaacaattcaatcaataacatttctctat
gaaatacttctgaccggtatacgagggccttttctgatcattgcaccactttccactatt
acaaactgggagagagaatttcgcacatggactgatcttaatgttgtggtgtatcatggg
agcctggttagcaggcagatgatacagcaatatgagatgtacttcagggactcacagggg
cgtattattagaggagcatacaggttccaggccataatcaccacttttgaaatgattctg
ggaggctgtggagagctcaatgcaattgaatggcgatgtgtgattattgatgaagcgcat
aggttaaagaataaaaattgcaaactcctagaaggtctgaaactcatgaatctggagcac
aaggtgcttttgactggtacaccacttcagaatacagttgaagaactattcagtcttctt
catttccttgaacccttacgatttccttctgaatctacattcatgcaagaatttggggat
cttaaaacagaagaacaggtacaaaagcttcaagccattttaaaaccaatgatgttgaga
agattgaaagaagatgtagaaaagaagttggctcctaaggaagaaaccataattgaagta
gaacttactaatattcagaagaaatattatcgggctatcttggaaaagaatttttcattt
ttatccaaaggagcaggacaagctaatgtacctaatttagttaacactatgatggaactc
agaaaatgctgtaaccacccttatcttatcaaaggtgctgaagagaagattcttggggaa
tttaaagagacacataacccagctgctcctgactttcatcttcaagcaatgatccagtct
gctggcaaattggtactcattgataagcttcttccaaaaatgaaagcaggtgggcataaa
gtgcttatcttctctcagatggtgcgctgccttgacattttggaagactatctcatacat
aagaggtatttgtatgagcgaattgatggaagagttagaggaaatcttcgacaagctgcc
atagatcggtttagtaagcctgattcagacagatttgtatttcttttgtgcactcgagct
ggtggactgggcattaatttaactgcagctgatacatgcatcatttttgattctgactgg
aatcctcaaaatgacctccaggcccaagctcgatgtcacaggattggtcaaaacaaagca
gtaaaagtctacagattaataactcgtaattcttatgagagagagatgttcgaccgggca
agcctaaaattgggtctagataaggctgtgttacaaagcatgagtggaagagaaaatagt
gttggtggtattcagcaattatccaaaaaggaaatagaagatctacttcgaaggggtgca
tatggtgccattatggatgaagaagatgaaggttctaaattctgtgaagaggatattgat
caaattttacagcgtcgtacaaaaacaatcacaattgaatctgaaggaagaggctcaaca
tttgccaaggcaagttttgtggcttctggaaaccggactgatatttccttagatgatccc
aacttttggcagaaatgggcaaagaaagcagaaattgatatagatgccctcagtggcaga
aacagcttagttattgacactccaaggatcagaaaacaaacaagaccttttagtgccaca
aaagatgaattggctgaattgtctgaagttgaaagtgaaggagatgataagcccaaactc
cgtagaccatgtgaccgttccagtggctatggaagaacagaatgctttcgagtggagaaa
aaccttctcgtttatgggtggggtagatggagagagattctagctcatggtcgatttaaa
agacaactaaacgaacaagacgtggaaatcatttgccgagcccttttagcatattgcctc
gttcactaccgaggagatgagaagattaagagtttcatatgggatctcattacccctacc
gaagatgggcagacaagagaattgcaaaatcatctgggtctgtcagctcctgtccccagg
ggtcgaaaggggaagaaagtgaaaacccaagcaagcacgtttgatatccataaagcagaa
tggcttcgaaaatataatcctgagcatctgctacaagacgaaggctataaaaaacacata
aaacatcattgtaataaggttttgcttcgagtgaggatgctatattatttaaaacaagaa
gttattggtaatgagtttcagaaagtatttgatggagttgaagcaagtgacattgatgtt
tgggtccctgagccagaccattctgaagtccctgctgagtggtgggatcttgatgctgat
aaatctctccttattggcgtttttaaacatggttatgaaaagtacaacacaattagagca
gatccagcactgtgtttcttggaacgagtaggaaaacctgatgaaaaagcagttgctgct
gaacagagagcaaatgattacatggatggggatgtggaagacccagaatataaaccagct
ccagctatatttaaagatgatttagaggatgatgtttcatcaccaggcgatcttgtaata
gcagatggagatggccaaatgatggaaggagacaagatttattggcctactcagtctgcc
ttaactacacgcttgcgccgtctcataacggcatatcagcggaccagtaaaaatagacaa
gcccaacaaatccaaccagcattctcagtacaggccaatgtgatgcagactccttatgaa
gaagctgctcttaaccctaaaatagctgccaaaattgaaagacagcagagatggacaaga
agagaggaagctgacttttatagagttgtttctacttttggagtggtatttgatcctgac
agaggacagtttgactggacaaaatttagagccatggctagactgcacaagaaaacagat
gatagtttggagaagtatttatatgcttttatgtccatgtgcaggagagtttgccgcctt
ccttccaaagaagaattggtggacccaagtatttttatccaacccatcacagaggaacgt
gcttctaggactttgtatcgaattgagcttctaaggaaagtacgagaacaggctctccga
catccacaactgtttgaacgtttaaagctttgtcagccaaatccagatttgcccatctgg
tgggagtgtggcactcatgacagagatttgcttattggagcagctaagcatggggttagc
aggacagactatcacattcttcgtgatcctgaactctcatttatggcagctcagaggaac
tatagtcaaaataaaatgactcattcaagaacttctactccacttattcaacagtatcag
atggcactgtctgcttcccctctttcttctcaaccaaggttactggatgctaaagggaat
gccctggaagatacaaaagttaaaaacgaaagccttaaagaggagcctcagtcttctgga
gaggaatctgtgtcttctgaagaaattagaacaggaataaaatctgaacctttaagccca
aagaatggtgttttgccacagactactggagacccaaagtctggtggaaaggttgaaaca
gataggcgcatggttgcagccaggacagaacccctaacgccaaacccagcttccaagaaa
cagagagtcagtaaaaggggatctgaatccagctctgattcagactcagattctgacaga
tcttcttgttcttctagatcatcatcttcttcctcctcctcttcttcctcttgttcccac
tctcgatctggatctagctcttcatcatcttcatcttgttcttcagcatcttcttcatcc
tcatcttcttcttcctcatcctcttcttcttcttcatcagaagaaagtgatagtgaagaa
gaagcacagaagcgagaaggcaccactcacatgaaatcatatgatgaggaaagtgttgca
tcactaagcactatacaagatgagactcaggatagttttcagatgaacaatggaacaccg
aattctgcttacatcttacaaggcggatacatgctggctgcttcttattggccaaaggat
cgagtgatgattaatcggttagacagcatttgtcaaacagtcctgaaaggaaagtggcca
tcagcccggaggggttacgagggaagtgcagttgcatctttctatacaaccaagcttctg
gacagcccgggtgctgctgcagacactggcgagccctgcttgctgactcctccaagtgca
ggggcaagagaagagcgtgaccagtccacacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggcggtttgaagttgacttttcaaaag
caaggactttctcagaaaaggccgcttgaaaatgaagatggttcactaggacagcagcag
tacctagcacggcttcgggaacttcaaaatgcttcagagaccagccttgtcaattttcca
aagtctatgccaatatcgggtacttctagtcagccagctattggtgccaatggagtgata
ttagaaaaccagcccatagtcaaaaaaaggagaggaagaaggaagaatgtagaagatgtt
gacattctcctgttaaatagaaataaaccacctaatcatgttactataggcattaccacc
tcacaaattactccaggaataaatccagcactgtcatatgcccaatctcaagggatactt
gatatagaaaatccagtaccagttattaatctgaaagatggaacaagacttgcaggcgat
gatgcacccaaaaggaaggatttagaaaaatggcttaaggagcacccaggttatgtggaa
gacttaggagcctttattcctcgaatgcagcttcatgatgggagacctaagcaaaaaaga
catcgctgcagaaaccccaacaaactagatgttaatagtctcactggagaagaacgtgtt
cagttgattaacagaagaaatgccagaaaggtaggaggtgcatttgctcctcctttgaaa
gatttatgtagattcctgaaagaaaattctgaatatggggtcgctcctgagtggggagat
gttgttaaacagtctggatttcttcctgaaagcatgtatgaccgtattcttactggtcct
gttgttcgagaagaagtaagcaggcggggaagacggcctaaaagtgagattgccaaggca
acggcagcagcggcagctgcaacagcagcaaatgtgtctggcaatcctttgctaggcaat
ggattactcccaggtgtggatctgaccactcttcaggccttacaacagaacctgcaaaat
cttcagtcactacaagtaactgcagggttgatggggatgcctgccagtttatctggtgga
gaagtgaataaaaacatggctgctatgtttccaatgcttttgtcagggatgacaggatta
ccaaatttactaggcatgggaggactcctgacaaaacctgcagaatctgtggcagaagaa
aaaaaggcaaatgactccaaggagccagatggaagaaaagaaaggacagaaagccaaaac
tctgacaatgttggagaaaactctgtatcgagttctccttccacttcctcttctgctgca
ttaaatactgctgcagctgccaatcccttagctcttaacccattactattgtccaatata
ctttatccagggatgcttctcactccaggccttaatcttcatattccagctttgtcccag
tccaatatttttgatgtacagaacaacaaaaacaatgacctagactcagccaagcctgta
gaggaaaaggaggaagattccagggttagagatcaggaagaaaaaggggaaactgaacca
agttctctcaatgaaaacagcacagatgagggttcagaaaaagcagacgcttcatcggga
tctgagagtacatcatcatcatctgaggagtccgattctagtaatgaagactga
DBGET
integrated database retrieval system
