Gracilinanus agilis (agile gracile opossum): 123237422
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Entry
123237422 CDS
T07702
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03250
Viral life cycle - HIV-1
gas04623
Cytosolic DNA-sensing pathway
gas05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123237422 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
123237422 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
123237422 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gas03400
]
123237422 (SAMHD1)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123237422 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
123237422
NCBI-ProteinID:
XP_044520269
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Position
2:345864793..345925476
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AA seq
622 aa
AA seq
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MRELGAPQKRPRCGSPDPPPEHAAALAEAAGAEFQDDGDPQSWSPEQLCTFLDHQGFSDP
ALLSRFRENKIRGSQLLHLDESLLENLGVRSSEERQKLLDCVCKLNQNYEDTMKVFNDPI
HGHIELHPLLIKIIDTPQFQRLRYIKQLGGSYYVFPGASHNRFEHSLGVGYLAGYLVRTL
QEKQPELQITNRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPELNWRHENASVKMFE
HLVNANGIEDVMRNYGLVPEEDICFIKEQIEGSLDSTEENSQWLKKGRPQEKNFLYEIVA
NKRNGIDVDKWDYFARDCHHLGIQNNFDHKRFIKFARVCKVDKMTHICTRDKEVGNLYDM
FHTRNCLHRRAYQHKIGNIIEKMITDAFLKADPYIQIEGSGGKKYKLSTAIDDMEAYTKL
TDNIFLEILHSTDPNLAEAREILQKVECRKLYKFVGETQPTGTDKITVEEYDQLPKSVAE
SKPENIPLPVELKAEDFVVDVINMDYGMKEKNPIDNVRFYCKSDRSKPVMITKDQVSQLL
PEKFAEQLIRVYCKKTDKQSLDTAAQYFVQWCINKNFTKPQDGDVLAPKLTPRKPSWNPQ
NRGQDPDGARKGYKPKGNLFGN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcttggtgcgccccaaaagcgtcctcgttgcgggagtcccgacccccctccg
gagcacgccgcggcgcttgccgaggcagcaggcgcggagttccaggacgatggcgatccc
cagagctggagtcccgagcaactgtgcaccttcctcgaccatcagggcttcagcgacccg
gcgctgctcagccgcttccgagaaaacaaaatcagaggttctcagcttctccaccttgat
gaatctcttcttgaaaaccttggagtaaggtcttcagaagagagacagaagctgctggat
tgtgtctgtaaactgaatcaaaactatgaagatacaatgaaggtgtttaatgatcctatc
catggccacatagagcttcacccacttcttatcaaaatcattgacacacctcagtttcaa
cgtctgagatatattaaacagcttggaggatcttactatgtttttccaggtgcttcacat
aatcgatttgaacattctctgggtgtcgggtatctagcaggatatctggtccgcactctt
caagaaaaacagcctgagctacagataactaatcgggatatactttgtgttcagatagct
gggctctgtcatgatctaggtcatggaccattttcacacatgtttgatggaaggtttatt
cctcttgctcgcccagagttgaattggaggcatgaaaatgcttcagtcaagatgtttgag
catctggttaatgccaatggaattgaagatgtcatgaggaactatggccttgtcccagaa
gaagatatatgttttatcaaagaacaaattgaaggatctcttgattcaacagaagagaac
tctcagtggctgaagaaagggcgacctcaagagaaaaactttctttacgagatagtggct
aataaacgcaatggcattgatgtggataaatgggattattttgccagggattgccaccat
cttggaattcaaaataattttgaccataagcgctttattaagtttgctcgtgtatgtaaa
gtagacaagatgacacatatttgcaccagagacaaggaagtcggaaatctatatgacatg
ttccatacacgcaactgcctgcaccgaagagcttatcagcacaaaatcggcaacatcatt
gaaaaaatgattacagatgccttccttaaagcagatccctatatacaaatagaaggttca
gggggaaaaaaatacaagctttctacagcaattgatgatatggaagcctacactaaactc
acagataacatctttctggagattttgcactctactgatcccaacctggctgaggcacga
gagattttgcaaaaagttgaatgtcgcaaactatacaagtttgtgggcgagactcagcca
acagggacagataagattacagtggaggaatatgatcaacttccaaaaagtgttgcagaa
tctaaaccagaaaatatacccctaccagtggaattaaaggccgaagattttgtagttgat
gttatcaacatggattacggaatgaaagaaaaaaatcctattgataatgtgcgtttctat
tgtaagagtgaccgaagtaaaccagtcatgattacaaaagatcaggtttcacagcttctg
cctgaaaaatttgcagaacagcttatccgagtatattgtaagaaaacagataagcaaagt
ttagatactgctgctcaatattttgttcagtggtgtataaacaaaaacttcactaaacca
caggatggtgacgttttggccccaaagctaacacctaggaaaccaagttggaatccccag
aatagaggccaggatccagatggtgcaagaaagggttacaaacccaaaggcaaccttttt
gggaattga
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