Gracilinanus agilis (agile gracile opossum): 123237436
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Entry
123237436 CDS
T07702
Symbol
CPNE1
Name
(RefSeq) copine-1 isoform X1
KO
K24524
copine 1/2/3
K24526
RNA-binding protein 12
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123237436 (CPNE1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gas04990
]
123237436 (CPNE1)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123237436 (CPNE1)
Domain-containing proteins not elsewhere classified [BR:
gas04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
123237436 (CPNE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
RRM_1
C2
vWA-TerF-like
VWA
RRM_8
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
123237436
NCBI-ProteinID:
XP_044520293
LinkDB
All DBs
Position
2:347189163..347225580
Genome browser
AA seq
1413 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDMPPANASRSGPPPSSGMSGRVNLP
TTVPNFNNPSPSVVTAATSVHESNKNIPTFSTANIGTAPPNIGASFGSPTFSSTLPSTAS
SMSTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPPVPPMSPMPP
LSGMPPLNPPPVAPIPTGMNGSGAALNLNSNLNPMFLGPLNPVNPIQMNSQSSLKPLPIN
PDDLYVSVHGMPFSAMETDVKDFFHGLRVDAVHLLKDHVGRNNGNGLVKFFSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQTHPPPQTLVRSKSPSGQKRS
RSRSPHEPGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRS
ESDYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREIILNTEGDSS
PKLCAHISNIPFNITKMDILQFLEEIPVDENAVHILVDNTGQGLGQALVQFKTEDDAHKA
ERLHRKKLNGREALLHVITLEDMREIEKNPPSQVKKGLKIPLPGNATVPGMPNAGGDEHA
FLTVGSKEANNGPPFNFPSNFSGSNAFGPPLPPPGLGGAFGDARPGIPSVGNSGLPGLGI
DVQGFGSGPNNLSGPSAFGAAPQNFGNGPGTLSGPPSFGGGPPGLGSTAGHLSGPPSFGP
GPGALHIGGPPGFGTTSGKPGPTVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEK
GMPTGEAMVAFESRDEAMAAVVDLNDRPIGSRKVKLMAHCVTSVQLSISCDHLIDKDVGS
KSDPLCVLLQDVGGGNWAELCRTEPIRNCSSPEFSRPLPIDYHFETVQKLRFGVYDIDNK
TPELGDDDFLGGAECTLGQIVSSQMVTLPLMLKPGKPAGQGTITVSAQEVKDTRVVTMEV
EARNLDKKDFLGKSDPFLEFYRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPLQHFCGGDP
TIPIQVRCSDYDSDGSHDLIGSFQTNLTQLQGTPVEFDCIHPEKQQKKKSYKNSGTIRIK
ACQIEAEFSFLDYVMGGCQINFTVGIDFTGSNGDPSSPDSLHYLSPSGVNEYLTALWSVG
CVIQDYDTDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCPGIQGIVDAYRQSLPQVR
LYGPTNFAPIINHVAQFATQAAQQGTALQYFVLLLLTDGAVSDVEATKEAVVRASRLPVS
IIIVGVGGADFTAMEELDGDGGPLRARNGETVARDVVQFVPFRQFQSAPKEALAQAVLAE
VPRQLVSYYKAQRLAPHKPPVLPAKDPAPAPKN
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtactattaaagggtcaaaagtaacactattgttgagtagtaaaactgaaatgcaa
aatatgattgaactcagtcgtaggcgttttgaaaccgccaacttagatatgccaccagca
aatgctagccgatcaggaccacctcctagttcaggcatgagtggtagggtaaatttacct
accacagttcccaattttaataatccttctcccagtgtggttactgcagccacatctgtg
catgaaagcaacaaaaacatccctacgttttccacagccaacataggaacagcccctcca
aatatcggggcttcctttgggagtccaacatttagttcaactctacctagcacagcatct
tccatgagcacagtcccacctcccccaattcctccaataccagcaatgccctccttgcca
ccaatgccatctattcctccaatacctgttcctcctcctgtacctacattgcctcctgtg
cctcccgtgcccccgatacctcctgttcctccagtgccacccatgagccctatgccacct
ctgtcaggaatgcctcccttgaatccaccaccagtggcaccgatacctactgggatgaat
gggtctggagcagcactgaatctgaacagtaacctgaacccaatgtttctgggtcctttg
aatcctgttaatcctattcaaatgaactctcaaagtagtctgaagccacttcccatcaac
cccgatgatctgtatgtcagtgtccatgggatgcccttttctgcaatggaaactgatgtc
aaagactttttccatgggcttcgtgtagatgcagtgcatttgttgaaagatcatgtaggc
cgaaataatgggaatggattagttaagtttttctcccctcaagatacatttgaagcactg
aaaagaaacagaatgctgatgattcaacgctatgttgaagtcagccctgccacagagaga
cagtgggtagctgctggaggccatatcactttcaagcagagcatgggaccttctggacag
acacacccccctcctcagacactcgtcaggtcaaagtcgcctagtgggcagaaaaggtca
agatcgagatctccacatgagcctggtttttgtgtgtatttgaaaggtctaccctttgaa
gcagaaaacaaacatgttattgatttctttaaaaagctagatattgtggaagatagtatt
tatattgcttatggacccaatgggaaagcaacaggtgaaggttttgtagaattcaggagt
gagtctgattacaaggcagctttgtgtcgtcataagcaatacatggggaatcgctttatt
caggttcacccaataactaaaaagggaatgttagaaaagatagacatgattcggaagaga
ctacagaacttcagttatgatcagagagagatcattttaaatactgagggagatagctcg
ccaaaattatgtgcacatatatcaaatattccattcaacattaccaagatggatattcta
caattcctggaggaaattccagtggatgaaaatgctgtacatattcttgttgataacact
ggtcaagggttagggcaggcattggttcagtttaaaactgaagatgatgcacataaggct
gaacgcttacatcgtaaaaaacttaatgggagagaagctttattgcatgtaattacccta
gaagatatgagggaaattgaaaaaaatcccccatcccaagtgaaaaaagggttaaaaatt
ccattgccaggtaatgccacagtgccaggaatgccaaatgctggaggtgatgagcatgcc
ttcctgactgtgggctcaaaagaagcaaacaatggccctccttttaattttcccagtaac
ttcagtgggtcaaatgcctttggcccaccacttccaccaccaggattaggaggggccttt
ggagatgcccggcctggaataccttctgttggaaatagtggtttgcctggtttaggtatt
gatgttcagggttttggaagtggtccaaataatttaagtggaccatcagcttttggagca
gctcctcagaattttggaaatggacctggtactctgagtggtcctccaagttttggaggt
ggacctccaggtcttggtagtactgctggacatttgagtggaccaccaagctttggtcct
gggcctggagcactccatattgggggaccccctggatttggaacaacttctggaaagcca
ggcccaacagttattaaagttcaaaatatgcccttcactgtctccgttgatgaaatttta
gatttcttttatggctaccaagtgatcccgggctcagtgtgtttaaaatacaatgaaaaa
ggcatgcccacaggtgaagcaatggttgcatttgagtctcgagatgaagccatggcagct
gttgttgatttaaatgacagacctataggctcaagaaaagtcaaacttatggcccactgt
gtgacctcggtacagctgtccatctcctgtgaccacctcatcgataaggacgttggctcc
aagtccgacccactctgtgtcctgctacaggatgtgggtgggggcaactgggctgagctc
tgtcggacagagcccatccggaattgctccagccccgagttttctagaccactgccaatc
gactatcactttgaaacagtccagaagttgcgttttggtgtctatgacattgacaacaag
acccctgagctcggagatgatgacttcttggggggagctgagtgcacccttggacagatt
gtatccagccagatggtgaccctgcccctaatgttgaagcctgggaagccagctgggcaa
ggaaccatcacggtctcagctcaggaggtaaaggacactcgagtggtgaccatggaggtg
gaggccaggaatctggacaagaaggattttctgggcaaatctgatccattcctagagttt
taccgacagggtgatggaaagtggcatctggtctacagatctgaggtgattaagaacaac
ctgaatcctacgtggaaacgcttcagtgtccctttgcagcatttctgtgggggagaccct
accatacccatccaggtgcgctgttcagactatgacagtgatggctctcatgacctcata
ggctccttccagaccaatctgacccagctgcagggcacccctgtggaatttgactgtatt
catcctgagaaacagcagaaaaagaagagttacaagaattcagggaccatccggatcaag
gcctgccagattgaggcagagttctccttcttggactacgtgatgggtggctgccagatc
aatttcacagtgggtatagacttcactggatccaacggggacccttcctctccagattcc
ctgcattacctgagtccctctggggtcaatgaatacctgacagcattgtggagtgtgggc
tgtgtgatccaagactatgacacggacaaactgtttccggcttttggatttggggcccag
gtgccccccgactggcaggtctctcatgaatttgccttgaacttcaatcccagtaaccct
tactgcccaggtatccagggcattgtagatgcctatcgccaatccctgcctcaggtccga
ctctatggccccacaaatttcgcccccattatcaaccatgtggcccaatttgccacccag
gcagcacagcagggaactgccttgcaatactttgtgctgctcttgctgacggatggggct
gtatcagacgttgaggctacaaaggaggctgtggtgcgggcctcacgcttgcctgtgtcc
atcatcatcgtgggtgttgggggtgctgacttcacagccatggaggagttggatggcgat
ggaggtcccttgcgagctcgcaatggagagactgttgcccgagatgttgtccaattcgtg
cctttccgccagtttcagagtgccccgaaggaggcactggcccaagcagtccttgctgag
gtgccccggcagctcgtgtcttactataaggcacagcgtttggctcctcacaagccccca
gtcctgcctgccaaggaccctgcaccagcccccaagaactaa
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