Gracilinanus agilis (agile gracile opossum): 123237627
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Entry
123237627 CDS
T07702
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03440
Homologous recombination
gas03450
Non-homologous end-joining
gas04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123237627 (RAD50)
03450 Non-homologous end-joining
123237627 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
123237627 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gas03032
]
123237627 (RAD50)
03400 DNA repair and recombination proteins [BR:
gas03400
]
123237627 (RAD50)
DNA replication proteins [BR:
gas03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123237627 (RAD50)
DNA repair and recombination proteins [BR:
gas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123237627 (RAD50)
BRCA1-C complex
123237627 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
123237627 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
UPF0231
Nup54_57_C
AAA_13
Motif
Other DBs
NCBI-GeneID:
123237627
NCBI-ProteinID:
XP_044520599
LinkDB
All DBs
Position
2:complement(425952608..426037250)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIEKMSIMGVRSFGIEDKDKQVITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNTFVHDPKVAQETDVKAQIRLQFRDVNGEIVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRSVRHEQSGRVKECQTELKYLKQNKEKAHEIRDQIVSKEAQLASSKEF
VKSYENELGPLKTHLKEIEQNLSKIVRLDNDIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDMYHNHQRTVREKERKLIDCQRELDRTNKESKLLNHEKSGLLVEQGRLQLQANHH
QQNIRARDSLIQSLATHLELDGYERAPFNERQIKNFQKLVMEIEERETETNRRMMNDFAG
KESMKQKQIDEIRDKKTGLERIIELKLEIQNKKQTELKNVKYELQELEGSSDRILELDQE
LRKNELELGKAEKNSNIGALKEEVPALLREKGDLDRSLRKLDQEMEQLNHHTMTRTQMEM
LTRDKADKDEQIRKIKSRHNDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKFNKD
LASAEQNKNHINHELKQKEEQLSQYEDKLFDVCGSQDFESDLDKLMDEIEKSSKQRAMLA
GATAVYSQFITQLTDEKQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RREKRRNEMMELKPMRQSIIELKEREIPELRNKLQNVNRDIQHLKGEIEEQETLLGTIIP
EEESAKACLTDVTIMERLQMELRDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLD
TVSSKIELNRKLIQDQQEQIQHLKSTVNELKSEKLQISSNLQRRQQLEEQTVELSTEVQS
LHREIKDSKEQLCPLEATLGKLQQEKEELINKKNTSNSAAQEKLNDIKEKVKNISSYMKD
IENYIQDGKDSYKTQKEAELNNVISQLNECEKQRDKISKEMGTMRQDIDMQKVQERWLQD
NLTLRKRNEELKEVEEERKKHLKEMGQMQVLQLKNEYQTLEEKIETLKRNHSLALGRQKG
YEEEIIHFKRELRDPQFSEAEEKYREMMIVMRTTELVNKDLDIYYKALDHAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDTDENVTASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIRKNIDQCSEIIKCNVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaattgaaaagatgagcattatgggtgtgaggagttttggaatagaggataaa
gataagcaagttataactttcttcaatcctttaacaattttggttggacccaatggtgca
ggcaagacgaccatcattgaatgtctgaaatatatttctactggagatttccctcctggt
accaaaggaaatacatttgttcatgatccaaaggttgctcaagaaacagatgttaaagct
cagattcgtctacagtttcgtgatgttaatggggaaattgtagctgtacagaggtcaatg
gtgtgtacccagaaaagtaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggttagcctcagctctaagtgtgctgaaatcgaccgagagatg
atcagttcccttggtgtttccaaatctgtgctcaataatgtcattttctgccaccaagaa
gattccaattggcctttaagtgaaggaaaagccctgaaacagaaattcgatgaaatcttc
tcagcaacaaggtatattaaagccttagagacccttcgttcagtgcgtcatgaacaaagt
gggcgagtaaaggaatgccagacagaactaaagtatctgaaacagaataaggaaaaagct
catgagattcgtgatcagattgtcagcaaggaagctcaattagcatcttctaaggagttt
gtcaagtcctatgaaaatgagcttggaccactgaagactcatctaaaagaaattgaacag
aatctttccaaaatagtgagacttgacaatgacattaaagctctggagagtagaaagaag
caaatggaaaaggacaacagtgaactagagcagaaaatggaaaaggtatttcaagggact
gatgaacagctaaatgatatgtaccataatcatcagagaacagtaagagaaaaggaaagg
aaactaattgattgtcagcgagagctggacagaacaaataaagagtctaagctgctgaat
catgaaaaatcaggactgcttgtggaacagggtcgtctacaactacaagcaaatcaccat
caacagaacatccgagctagagattcattaatccagtctttggcaacacatttagaatta
gatggatatgagcgagcaccatttaatgaaagacaaattaaaaattttcagaagcttgtg
atggagatagaagaaagagaaacagaaactaacaggcgaatgatgaatgattttgcagga
aaagaaagtatgaagcaaaagcagatagatgaaataagagataagaaaactggcctggaa
agaataattgaactgaaattagaaatacaaaataagaagcagactgagctgaaaaatgta
aaatatgaactgcaagagttagaaggctcttcagacagaattctcgaattggaccaggaa
ctcagaaaaaacgaacttgaacttggcaaggcagagaaaaacagtaacataggagcactg
aaagaagaagtaccagcactactacgggagaaaggagacctggacagaagtcttcgtaaa
ttagatcaggagatggaacagttaaaccaccataccatgacgagaactcaaatggaaatg
ctgaccagagacaaagctgacaaagatgaacaaataagaaaaataaaatctagacacaat
gatgaattaacttcattgttaggctattttcctaacaaaaagcaacttgaagactggctt
catagtaaatccaaagaaattaatcagacaagggacagacttgctaaatttaacaaagac
ctagcttcagcagaacaaaataaaaatcacatcaaccatgaactcaaacagaaggaagaa
cagttgtcacaatatgaagacaagctatttgatgtttgtgggagtcaggattttgagagt
gatttagataagctaatggatgaaattgaaaaatcttctaaacaaagagcaatgcttgct
ggagccacagcagtttactcccaatttattactcagctaactgatgagaaacagtcatgt
tgccctgtgtgtcagagagtctttcagacagaggcagaactacaagatgtgataagtgat
ttgcaatccaagctacgccttgctcctgacaaactcaaatcaacagaatctgagctgaag
agaagagaaaaaaggcgtaatgaaatgatggagcttaaaccaatgagacaaagcataatt
gagttgaaggaaagagaaataccagagttgaggaataaactacagaatgtgaacagagac
atacagcatctaaagggtgaaattgaagaacaagagactctcttaggtactataatacct
gaagaagaaagtgctaaagcatgtttaacagatgttactatcatggaaagattacagatg
gaacttagagatgttgaacgaaaaattgcacaacaagctgctaagctacagggagttgat
ttggatcgaactgtgcaacaagtaaaccaagaaaagcaagaaaaacagcatagattagac
acagtttccagtaaaattgagttgaatcgtaagcttatacaggaccagcaagaacaaatc
caacacctaaaaagcacagtaaatgaacttaaatcagaaaaacttcagatatctagtaat
ctgcaacgtcgacagcaactggaggagcagacagtagaattgtctacagaagttcagtcc
ttacatcgagaaataaaagattcaaaagagcaactatgcccactggaagcaaccctggga
aaattgcagcaagaaaaagaagaattaattaacaaaaagaatacaagtaacagtgcagca
caggaaaaattaaatgatatcaaagagaaggttaaaaatatctctagctatatgaaggac
attgagaactatattcaagatgggaaagacagctacaaaacgcaaaaagaagctgaactt
aataatgtaataagtcagctaaatgaatgtgaaaaacaaagagacaagataagtaaggaa
atgggaacaatgagacaagacatcgatatgcaaaaggtacaggaaaggtggctacaagat
aaccttactctgaggaagagaaatgaggaactgaaagaagttgaagaagaaagaaagaaa
cacttaaaggagatgggacaaatgcaggttttacagctgaaaaatgaatatcagacatta
gaagaaaaaatagaaacactgaaaagaaatcacagtttggcattaggaagacaaaaaggt
tatgaggaagaaattattcattttaagagagaactgcgagatcctcagttttctgaagct
gaggaaaagtacagagaaatgatgattgtgatgagaacaacagaacttgtgaacaaggac
cttgacatttattacaaggcattggaccatgcgataatgaagtttcatagcatgaaaatg
gaagaaatcaataaaattattcgtgatctctggcgaagtacctaccgaggccaagatatt
gaatatatagaaattcgatctgatacagatgaaaacgtaacagcttctgacaaaaggagg
aattacaactatagagttgtaatgctaaaaggagatacagccttggatatgcgaggacgg
tgcagtgctgggcaaaaggtacttgcttctcttatcattcgcttggccctggcagaaacc
ttctgtctgaactgtggcattcttgccttggatgagcctacgacaaaccttgatagagaa
aacattgaatctcttgcacatgcactggtggagataataaaaagtcgttctcagcaacgc
aacttccagcttcttgtgattacccatgatgaagactttgtggagcttttgggacgttcg
gagtatgtggagaaattctacaggattaggaagaacattgaccagtgctcagagataatc
aaatgtaacgtcagctccctgggctcctatgttcattga
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integrated database retrieval system
