Gracilinanus agilis (agile gracile opossum): 123237652
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Entry
123237652 CDS
T07702
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03050
Proteasome
gas05010
Alzheimer disease
gas05012
Parkinson disease
gas05014
Amyotrophic lateral sclerosis
gas05016
Huntington disease
gas05017
Spinocerebellar ataxia
gas05020
Prion disease
gas05022
Pathways of neurodegeneration - multiple diseases
gas05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
123237652 (PSMC6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
123237652 (PSMC6)
09164 Neurodegenerative disease
05010 Alzheimer disease
123237652 (PSMC6)
05012 Parkinson disease
123237652 (PSMC6)
05014 Amyotrophic lateral sclerosis
123237652 (PSMC6)
05016 Huntington disease
123237652 (PSMC6)
05017 Spinocerebellar ataxia
123237652 (PSMC6)
05020 Prion disease
123237652 (PSMC6)
05022 Pathways of neurodegeneration - multiple diseases
123237652 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gas03051
]
123237652 (PSMC6)
Proteasome [BR:
gas03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
123237652 (PSMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_5
AAA_22
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
TPR_MLP1_2
bpMoxR
AAA_lid_PRS2_C
AAA_28
DUF5906
TsaE
AAA_24
DUF3829_2nd
ATPase
NACHT
AAA_25
AAA_17
Occludin_ELL
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
123237652
NCBI-ProteinID:
XP_044520651
LinkDB
All DBs
Position
2:complement(433986474..434015631)
Genome browser
AA seq
389 aa
AA seq
DB search
MADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgagagataaggctcttcaggactaccgtaagaagctgctagagcacaag
gaaatcgatggacgcctcaaagaattaagagaacagctgaaagagcttaccaagcaatat
gaaaaatctgaaaatgatctgaaggccttacaaagtgttgggcagattgtgggtgaagta
cttaaacagttaacagaagaaaaattcattgttaaagcaacaaatggaccaagatatgtt
gtgggttgtcggcgtcagcttgacaaaagtaagctgaagccagggacaagagttgctctg
gatatgactacactaactattatgagatacttgccaagagaagttgatccactggtttac
aatatgtctcatgaggaccctgggaatgtttcttattctgaaattggagggctatctgaa
caaatcagagaattaagagaggtaatagaattacctcttacaaaccctgagttatttcag
cgtgtaggaataatacctccaaaaggttgtttactatatggaccaccaggaacaggaaaa
acactcttggcaagagctgttgctagccaactggattgcaattttttaaaggttgtatcc
agttcaattgtagacaagtacattggtgaaagtgctcgtttgatcagagaaatgtttaat
tatgccagggatcaccaaccatgcatcattttcatggatgaaatcgatgctattggtggc
cgtcgtttttctgagggtacttcagctgatagagaaattcagaggacgctaatggagtta
ctgaatcagatggatggatttgatactttacacagagtcaaaatgatcatggctacaaac
aggccagacacattggatcctgctttgttgcgtccaggaagattagatagaaaaatacat
attgatttgccaaatgaacaagcaagattagacattttgaagattcatgcaggtcctatc
acaaaacatggtgaaatagattatgaagcaattgtgaagctctcagatggctttaatgga
gcagatctgagaaatgtttgcactgaagcaggtatgtttgcaattcgtgctgatcatgat
tttgtagtacaggaagatttcatgaaagcagtcagaaaagtggctgattctaagaagctg
gaatctaaactagattataaacctgtttaa
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