Gracilinanus agilis (agile gracile opossum): 123237777
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Entry
123237777 CDS
T07702
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123237777 (PRPF39)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123237777 (PRPF39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_MalT
TPR_12
TPR_16
Motif
Other DBs
NCBI-GeneID:
123237777
NCBI-ProteinID:
XP_044520842
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All DBs
Position
2:474007192..474049847
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AA seq
668 aa
AA seq
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MQNSAHMDEYSNSSNGNASNGSEVAIEQTTDFSTEIMNVIEMEQSPDGSPNVNEENTEEN
EISNVELPVTDTEAQFPPEYEKFWKAVENNLQDFTGWVYLLQYVEQENHLLAARKAFDKF
FTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPDD
PETNNTVRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTTIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTSEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARSILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEQLLQDA
VKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEDNILTCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQILLKEQ
DSLKRKAENGAEEPDEKKVHTEDASLASTQLIDGDIQANQAAYNYSAWYQYNYQNPWNYG
QYYPPPPT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctgctcatatggatgagtacagcaattctagcaatggcaatgcaagcaat
ggttctgaggtagccatagagcagaccactgatttcagtactgagattatgaatgttata
gaaatggaacagtcacctgatggctctcccaatgtgaatgaagaaaatacagaggaaaat
gaaatttcaaatgtagaactaccagtgacagacactgaagcacaatttcctccagaatat
gaaaagttttggaaagctgtagaaaataatctccaagattttactggctgggtatatttg
ctgcagtatgtagaacaagagaatcacttgctggctgccagaaaagcgtttgacaaattt
tttacacattatccatattgctatggttattggaaaaagtatgcagaccttgaaaaacgc
catgacaacattaaacaatcagatgaggtttatcgacgagggcttcaggcaatacctctt
agtgttgatctttggattcattatataaacttcttaaaagaaactttggacccagatgat
cctgagacaaataatacagtaagaggaacttttgagcatgccgttttagctgcaggaaca
gatttccgatctgacagattatgggaaatgtacataaactgggaaaatgaacagggaaat
ctgagagaggttacaacaatatatgatcgtattcttggtattccaacacagctctatagt
catcatttccagaggtttaaagaacacgtacagaataacttgcctcgagatcttttaact
agtgagcagtttattcagttacgaagagaactggcttctgtaaatggacacagtggtgat
gacggtccccctggtgatgatttaccatctggaattgaagatataacagaccctgcaaag
ctaatcactgaaatagaaaacatgagacatagaattatcgaaattcatcaagaaatgttt
aattataatgagcatgaggttagcaaaagatggacatttgaagaaggtattaaaagacct
tatttccatgtgaaaccattggaaaaagcacaactgaaaaattggaaagaatacttagaa
tttgaaattgaaaatgggactcatgaacgtgttgtggtgctctttgaaagatgtgtcata
tcatgtgccctctatgaggacttttggattaagtatgccaagtacatggaaaaccatagt
atcgaaggagtgagacatgtctacagcagggcttgtactatacatcttccaaagaaaccc
atggttcacatgctatgggctgcttttgaagaacagcagggtaatattaatgaagcaagg
agcattctgagaacatttgaagaatgtgttttaggattggccatggttcgtttgaggaga
gtaagtttagaacgacgacatggaaacatggaggaagctgagcagttgcttcaggatgct
gttaagaatgccaaatcaaataatgaatcctcattttatgctataaaactagctcgacat
cttttcaagatacagaagaaccttccaaaatcaagaaaagtgctcttggaagccattgag
agagataaagagaacacaaaattatacctcaatttacttgaaatggaatatagtggggac
ctcaaacaaaatgaagacaatattctcacctgttttgacaaggcaatacatggttcattg
cctattaaaatgagaattacattttctcagagaaaagtggagtttctagaagattttggt
tctgatgtgaacaagcttctggacgcttatgatgaacatcaaatactcttaaaggaacaa
gactctttaaaaaggaaagctgaaaatggggcagaagagccagatgaaaaaaaagtacac
acagaagatgcaagtttagcatctactcagttgatagatggagacatccaagctaaccaa
gctgcatataattatagtgcctggtatcaatataattaccagaatccctggaattatgga
cagtattatcctcccccgccaacctga
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