Gracilinanus agilis (agile gracile opossum): 123238003
Help
Entry
123238003 CDS
T07702
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123238003 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123238003 (CHD8)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123238003 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
123238003
NCBI-ProteinID:
XP_044521214
LinkDB
All DBs
Position
2:555039169..555078148
Genome browser
AA seq
2591 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTRDPIEEALGLPSTLDSLDQMNQDGGNSDLGS
STSSGLPPPTEETPPSEPPKESVTPAPESLTLHDYTTPPVGQEQPNQTILQAPPPPTGLL
QVSKGQEILSQGNPFMGVSATAVSSSSGGGQPPQTAPKIVILKAPPGTSVTGAHVAQIQA
QAITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNAVLATKVTGGQATVQRIVQ
PSRPVKQLVLQPVKSSTTTGNPGTGATPMKPAVTLTSAPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVQQPPSS
QQQQQPPSAQPVTLSSVQPAQIMGPGQSPGQRLTVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPAAPAPHTGGKAGVEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKNTGERLKEEKPKKSKASGTSKSKGRSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREEEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPVKSEPILPEPIQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSR
HPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHAY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTLF
QDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEVP
TNWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSDI
VEGVDFDKDCEDPEYKPLQGPPKDQEDEGDPLMMMDEEISVIDSDEVQVTQQPGHLFWPP
GSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTRR
EESDFYRVVSTFGVEFDPDTLHFHWGRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLP
PAAGDESPDPTLFIEPITEERASRTLFRIELLRRLREQVLCHPLLEDRLALCQPPGPELP
KWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQSQQAGAPAPSLSRCS
TPLLHQQYASSTASPLPLRPDAPTEKLPEEAATRVPSLESLALKLEHEAVAKNRPTPQDY
ELRVVPSDPTPMASQSVPPVKLEEEDDSDSELDLSKLSPSSSSSSSSSSSSSSTEDSEDE
KEEKLSADQSCSKLYDEESLMSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRVL
INRIDLVCQAVLSGKWPSSRRNQEMVTGGSLGQGNHLLDSPLLAPGEYGDSPVPTPRSSS
AASMAEEEVAAVSTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVLGDGH
PLFHKKKGSRKKLVELEVECMEEPHHLDVDLEARIPVINKVDGTLLVGEDAPRRAELEMW
LQGHPEFAVDPRFLAYMEDHRKQKWLRCKKPNKAEMGCLGMEQVQTVNSRNGKKGHLPDT
MFNRVLPGPVAPDNSKKRARRVRPDLSKMVALMQGGGSGPLSLHSTFQHGSSGLQPVSAL
GHSSATSTSLPFVPFVMGGTVSSPHVDSSTMLHHQHHHHHHHHHHHHHPGLRASSYPSTP
ATTTSAGTTLRLPPLQPEEEEEEEEEEEEEEDEEEEDDDLSQGYDSSERDFSLIDDPMMP
ANSDSSEDADD
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctttttgatgaccccaatttatttggcctggactctctg
actgatgacagcttcaaccaagtcacacgagaccccatagaagaagctcttgggctacca
agtaccctggactctttagatcagatgaaccaggatggtggaaacagtgacttgggaagt
tcaacatcaagtggcctgccccctccaacagaagaaacccccccttcagaacctcccaaa
gaatcagtaactccagccccagagtcactcaccttgcatgactataccactccaccagtg
ggccaggaacaacccaatcaaaccatcttacaggcaccaccaccgccaacaggacttctt
caggtctccaagggccaggagatcctgagccaaggaaatccttttatgggtgtctctgct
acagctgtctcctccagcagtggtggggggcaaccccctcagacagcacccaagattgtc
atcctcaaggccccacctggaacctcagtcacaggtgctcatgtggcacaaatccaagcc
caggccatcaccagcacagcacagcctttagtggctggcacagccaatggtggtaaagtc
acttttaccaaggtgctaactggtactcctcttagaccaggtgtctccattgtttctggc
aatgcagtcttggccactaaggtcactggaggccaggccacagtgcagcgaattgttcaa
cccagccggccagtaaagcagctggtcctgcagccggttaagagttctaccacaactgga
aacccagggactggagcaacaccaatgaagcctgctgtcacactgacctcagctcccact
cagggtgaatcaaagcgcatcactctggttctccagcagcctcagtcaggagggcctcaa
ggccatcggcatgtcgtgctggggagtctgccaggcaagattgtgttgcagggcaaccag
ctggcagccctgactcaggccaagaatgcccaggggcagcctgccaaagtagtgactatc
cagctgcaggtgcagcagccacagcaaaagattcagattgtacagcagccaccctcatcc
cagcagcagcagcagccaccctcagcccagccagtgaccctctcctcggtgcagccagcc
cagattatgggaccaggacaaagcccaggccaaagacttacagtaccactcaaagtggtg
cttcagcctcaggctggctcttcccaaggggcctcctcaggcctgtcagtggttaaagtg
ttgagtgccagtgaagtggcagctctgtcttccccagcagcccctgctcctcacaccggg
ggcaaagctggtgtagaggaaaaccggaggctagagcatcagaaaaaacaagagaaagct
aacaggatagtggcagaggccattgccagagcccgggcccgaggtgagcaaaatatccca
cgagtcttaaatgaagatgagttacccagtgtcagacctgaggaagaaggtgagaaaaaa
cgaaggaagaagaacactggagagaggctcaaggaagagaaaccaaaaaagagcaaagct
tctggtacctccaagtctaagggcaggagtaagttaaacaccatcactcctgtggtgggt
aagaagaggaaacgcaacacctcatctgataattctgatgtggaagtcatgcctgcacaa
tcacccagggaggaggaagagagcagcattcagaagaggcgctcaaaccgacaagtgaag
cgaaaaaaatacacagaggatttggacattaaaatcacagatgatgaggaggaagaagag
gtggatgtgactggtccagtgaagtctgagcccattttacctgagccaattcaggaacct
gatggcgagacattgccatccatgcagttctttgtggagaaccccagtgaagaagatgca
gccattgtggacaaagtgctttctatgcgggtggtgaaaaaggagcttccttctggacag
tatactgaagcagaggaattttttgtcaagtataagaattattcttatctgcactgtgaa
tgggccactatctctcaattagaaaaagacaagaggatccatcagaaacttaagcggttc
aaaaccaaaatggctcagatgagacacttctttcatgaggatgaagagcccttcaatcca
gactatgtggaagtggatagaatattggatgagtctcacagtattgacaaagacaacggt
gagcccgtaatttactacctggtcaaatggtgttctctgccctatgaggacagtacatgg
gaactgaaagaagatgtagatgagggcaaagtccgagagtttaaacggatccagtcaagg
catccagaactcaaaagggtgaatcgtcctcaggcaagtgcctggaagaaattagaattg
tcacatgaatacaaaaaccgaaatcaactacgagaataccagttagaaggggtcaattgg
cttctttttaactggtacaacaggcagaactgtatcctggcagatgaaatggggctgggc
aaaacaattcagtccattgccttcctacaagaggaatataatgtaggcatccatggcccc
ttcttagtcattgccccactctctacaattaccaactgggaaagggagttcaatacatgg
acagagatgaacactatcgtgtaccatggcagtctggccagccggcaaatgatccagcag
tatgaaatgtactgcaaagattcacgggggcggcttatccctggggcatataagtttgat
gccttgattaccacttttgagatgatcttgtcagactgcccagagctccgggagattgaa
tggcgttgtgtcattattgatgaagctcatcgactcaagaatcgaaattgcaagctgctt
gatagcctcaaacacatggacctggagcataaggtgctgctcacaggaacaccactgcaa
aacactgtggaagaactttttagcttgttacacttcttggaaccttcacagtttccttca
gaatcagagttcctcaaggactttggtgatctcaagacagaagagcaggtacagaagctg
caagccattctgaagccaatgatgttgagaaggcttaaagaagacgtggaaaaaaaccta
gctcccaaacaggagacaattattgaagtggagctaactaacatccaaaagaagtattat
cgtgctatcttggaaaaaaatttttccttcctttccaaaggtgcaggccacacaaacatg
cccaacctactgaatacaatgatggagctacgtaaatgttgtaatcatccatatctcatc
aatggcgccgaggaaaaaatcttaacagaatttcgggaggcctgccatatcatcccccat
gacttccatctccaggccatggtccgctcagctggtaagctggttctcattgacaagcta
cttccaaaactcaaagctggtggccataaggtgctgatcttctcccagatggttcgatgc
ctggatatcctggaggattatctgatccagagaagatacttatatgagcgaattgatgga
cgtgtgcgaggcaatctacgtcaggctgccattgatcgttttagcaaacctgattctgac
cgatttgtcttcttgctctgcacccgggctggtggccttggtatcaaccttacagctgca
gatacttgcatcatctttgattcagactggaacccacagaatgatttacaggcccaagca
cgttgtcatcgaatagggcaaagcaaagctgtgaaagtttaccgccttatcactcgaaat
tcttatgagagggagatgtttgataaggccagccttaagttgggattggataaggcagta
cttcagtccatgagtggtcgggatggcaacatcactgggattcaacagttctccaagaag
gagattgaagacctcctgaggaaaggtgcttatgcagctattatggaagaagatgatgag
ggttccaagttttgtgaggaagatattgaccaaattttactaaggcgtaccactaccatc
accattgaatctgaggggaaagggtccacttttgctaaggcaagttttgttgcttctgaa
aataggacagatatttctctagatgatcctaacttctggcaaaaatgggctaaaaaagct
gacctagatatggatttgctcaacagcaagaataacttggtgattgataccccaagagtg
cgtaagcaaacaaggcacttcagcactctgaaagatgatgacctagtagaattctcagat
ctggaaagtgaggatgatgagcgacctcgatcccgacgacatgacaggcatcatgcctat
ggacgcactgattgcttccgggtggaaaagcacctcttggtgtatggctggggtcgctgg
cgtgatattctgtcccatgggcggttcaaacgacgaatgactgaacgggatgtggagaca
atctgccgtgccattcttgtatactgtcttcttcactaccgtggggatgaaaacatcaaa
ggcttcatttgggacctgatcagccctgcagagaatggcaaaacaaaagaactgcagaac
cattcaggtttgtctatcccagtgcccaggggacgcaaagggaagaaagtgaagtctcaa
agtacctttgatatccacaaagcagactggatccggaaatataaccccgataccctcttc
caggatgaaagttataagaaacacttgaaacaccaatgtaacaaggtattgttgcgagta
cgcatgttatattacctgcgacaagaggtgattggtgatcaggcagagaaggtgttggga
ggtgccattgctagtgagattgacatatggttcccagtagtggatcagttggaagtccca
acaaattggtgggatagtgaagctgacaagtccttgctcatcggagtttttaagcatggc
tatgagaaatataatacaatgagagcagatccagccttatgctttctggaaaaggctggc
cggccagatgacaaggccattgcagcagaacatcgagtgttggacaatttttctgatatt
gtagaaggggttgactttgataaggactgtgaagatcctgaatacaagccacttcaaggc
cccccaaaggaccaagaggatgagggtgatcctttgatgatgatggatgaggagatttct
gtgattgacagtgatgaagtccaggtgacccagcagccaggtcatctcttctggcctcca
ggctcagctctgacagccaggctccggcgtctggttacagcctatcaacgtagctacaag
cgagaacagatgaagatagaggcagcagagcgtggggaccggaggcgacgacgttgtgag
gcagccttcaaactgaaagaaattgcacgacgagagaagcagcagagatggacaagacgt
gaggaatcagatttctaccgagtagtgtcaacctttggagtggagtttgatcctgacacc
ctccacttccactggggtcgattccgcacatttgcccgcttggacaaaaaaacagatgaa
agccttaccaagtatttccatggttttgtggccatgtgccgacaggtctgccgcctacct
cctgctgctggagatgaatccccagaccctactctattcattgagcccatcacagaggag
agggcctctcgcacccttttcagaattgaattgcttcggcgattacgggaacaagtacta
tgccatccattattagaagaccgattggcattgtgccagcccccaggccctgaacttccc
aagtggtgggaaccagttcgacatgatggggaacttctccgaggggcagcccgccatggg
gtgagccaaacagactgcaatattatgcaggacccagacttctctttcctggctgcccgt
atgaattacatgcagagccaacaggcaggggcaccagctccatccctgtcacgctgttct
accccactgctacaccaacaatatgcctcgagcactgcctcgccactgcccctgcgtcca
gatgctcctactgaaaagctaccagaggaggcagcaacccgtgtccccagcctggagagt
ctggccttaaaactagagcatgaggcggtggccaaaaacaggccaaccccacaagactat
gagttacgggtagtcccctctgatcctacccccatggcttcccaaagtgttccaccagtc
aaactggaggaagaggatgattcggactctgagctggacttaagcaaactgtcaccatcc
tcctcctcttcttcctcttcatccagctccagctctagcactgaagatagtgaagatgaa
aaggaagaaaagctgagtgctgaccagtcctgctccaaactctatgatgaagaaagtctc
atgtccctcactatgtcccaggatggattccctaatgaagatggagagcaaatgactcct
gagctattgctgcttcaggagaggcagagagcttctgaatggcccaaggatcgtgtcctg
ataaaccgcattgacctcgtctgccaggctgtcctctcagggaaatggccctccagccgc
cggaatcaagaaatggtgactggagggtcactgggacaaggcaaccatctgctagatagt
cctctgctggctccaggcgaatatggtgattcacctgtacccacccctcgaagcagtagt
gcagcttcaatggcagaagaggaggtggctgctgtcagtactgctgctgcccagttcaca
aaacttcgaaggggcatggatgaaaaggaatttacagtccagatcaaagatgaagaagga
ttgaagttgacatttcagaagcacaagttgatggccaatggagtgctaggagatggacat
ccactgttccataagaagaaggggagccgaaagaagttggtggagctggaggtggagtgt
atggaggagccccatcaccttgatgtagacttggaggcccggattcctgtcatcaataag
gtcgatggtactttgcttgtgggtgaagatgcccctcgtcgggctgagctggagatgtgg
ttacagggtcatccagaatttgctgttgatcctcggttcctagcttatatggaagatcac
cgaaaacagaaatggctcagatgtaaaaaacccaataaggcagagatgggttgtttggga
atggaacaagtgcaaacagtcaattctcggaatggaaagaagggtcatctccctgacact
atgttcaaccgggtcttaccaggccctgttgcaccagacaatagcaagaagcgagcccgc
agggtacggccagacctctccaagatggtggccctgatgcagggtgggggttctggaccc
ctgtctttgcatagtaccttccagcatggtagcagtggcttacaacctgtgtcagcacta
ggtcacagcagtgccacctctacatctttgccttttgtgccatttgtgatgggaggcaca
gtctcatcccctcacgtagactccagcacaatgcttcatcaccaacatcaccaccaccac
catcaccaccaccatcaccaccacccaggcctgagagcttctagctacccttccacgcca
gctaccaccacctctgcaggcacaaccctcaggttgccgccgctgcaacctgaggaggaa
gaggaggaggaggaagaggaagaagaggaagaagatgaggaggaagaagatgatgactta
tctcagggctatgatagctcagaaagggacttctcactcattgatgaccctatgatgcca
gccaactcggactccagtgaagatgctgatgactga
DBGET
integrated database retrieval system
