Gracilinanus agilis (agile gracile opossum): 123238151
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Entry
123238151 CDS
T07702
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123238151 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gas03021
]
123238151 (TAF5)
03036 Chromosome and associated proteins [BR:
gas03036
]
123238151 (TAF5)
Transcription machinery [BR:
gas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123238151 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
123238151 (TAF5)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123238151 (TAF5)
STAGA complex
123238151 (TAF5)
TFTC complex
123238151 (TAF5)
SAGA complex
123238151 (TAF5)
SLIK complex
123238151 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_RIG_1st
RAB3GAP2_N
CDK5RAP3
eIF2A
Cytochrom_D1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
123238151
NCBI-ProteinID:
XP_044521474
LinkDB
All DBs
Position
2:613967943..613988874
Genome browser
AA seq
813 aa
AA seq
DB search
MAALAEEQTEVVIKPDPEGPQALPATQPGDCPGEGSGSSHNSSHNGGGGGSGSVAASSAS
SDGGTPKPAVAPQAAAAAAAATAAPGGAAGASAAAAEGIASQDRQTLLAVLQFLRRSNLR
ESEEILRREARLLEEAAGAGALGEADGPGTEAAIALLSRVTAAAGPTGPGPGSGSGPGPG
ACPATGSSGAASATAAPAKVGVVAVEDQPDVSAVLSAYNQQGDPAMYEEYYSGLKHFIEC
SLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTK
KEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPR
SKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKK
DSMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFL
NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKTATDLSLIDKESDDVLERI
MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYP
VWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSA
DRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGEL
KGHTDTVCSLKFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQD
LLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcagaggagcagacagaggtggtaatcaagcctgacccggagggaccg
caggcgctcccagccacgcagccgggcgactgtccaggcgagggtagcgggagcagccac
aacagcagtcataacggaggtggcggcggcagcggcagtgtcgcggcgtcttcagccagc
agcgatggcgggaccccgaagcccgccgtggctcctcaggcagctgctgctgctgcggct
gcgacagcggccccggggggcgcggctggggcttcggcagcggctgccgagggcatcgcc
tctcaggaccggcagaccctgctggccgtgctgcagtttctacggcggagcaacctacgc
gagtctgaggagatcctgcggcgcgaggcccggctgctggaggaagcggcgggagctggc
gccctcggggaggcggacgggcccgggaccgaagccgccatcgcgctcctgagccgggtc
accgccgccgccgggcccaccggcccgggccctggctcgggttccggccccggccccggc
gcctgccccgccacggggagctcgggagccgcctcggccacggcagctccggccaaagtt
ggagtagttgctgtagaagaccagcctgatgtcagtgcagtgctgtctgcctataatcaa
caaggggatccagcaatgtatgaagagtactacagtggattgaaacatttcattgaatgt
tccctggactgtcatcgagcagaattatctcagttattttatcctctatttgtacatatg
tacttggaattggtctacaatcagcacgaaaatgaagcaaaatcattctttgagaagttt
catggcgatcaggaatgttattatcaggatgatcttcgagtattatctagccttaccaaa
aaggagcacatgaaagggaatgagactatgttggattttcgaacaagtaaattcgttttg
cgaatttcccgtgactcttaccaactcttgaaaagacacctccaggagaaacagaacaac
caaatatggaacatagtccaggagcacctgtatattgacatcttcgatgggatgcctcgg
agtaagcaacagatagatgctatggtgggaagtttggccggagaggcaaagcgagaggca
aataaggcaaaggttttttttggtttgttaaaagaaccagaaattgaagttcctttggat
gatgaagatgaagaaggggagaatgaggaaggaaagcccaaaaaaaagaaacctaaaaaa
gatagtatgggatctaaaagcaaaaaacaagatcctaatgctccacctcaaaacagaatt
cctcttcctgaattgaaagattcagataaattggataaaataatgaacatgaaagaaact
acgaaacgtgtgcgacttggtccagattgtttaccttccatctgtttctatacattcctt
aatgcctatcagggtctcactgcagttgatgtcactgatgattccagcttgattgcagga
ggttttgctgattccactgtcagagtatggtccgtaactcccaaaaagcttcgtagtgtg
aagacagcaacagacctcagcctcatagacaaagaatctgatgatgttttagaaagaatc
atggatgaaaaaacagcaagtgaattgaagattctatatggtcacagtgggcctgtttat
ggggcaagcttcagtcctgacagaaactacctactttcttcctcagaagatggcactgtt
aggctatggagcctccaaacatttacttgtttggtaggatacaaaggacacaactatcca
gtttgggatacacaattttctccatatggatactattttgtttcaggaggacatgacaga
gtagctcggctatgggctacagatcattatcagcctttacgaatatttgccggccacctt
gctgatgtgaactgtacacgctttcatccaaactctaactacgttgctacagggtcagca
gacagaacagtaaggctctgggatgtcttgaatggaaactgtgtaaggatcttcactggg
cataagggaccaattcattctttggctttttctcccaatgggagattcctggctactgga
gcaacagatggcagagtacttctttgggatattggacatggcttgatggttggagaatta
aaaggccatacagatacagtatgttcacttaagtttagtagagatggagaaattttagca
tcaggttcaatggataacacagttcgtttgtgggatgccataaaagcatttgaagaccta
gagactgatgactttactacagccactggacatataaacttgcctgaaaattcacaggat
ttattactgggaacatatatgacaaagtcaacaccagttgtacatctccattttactcgc
agaaacttggttttagctgcaggagcttatagtccacaataa
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integrated database retrieval system
