Gracilinanus agilis (agile gracile opossum): 123239040
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Entry
123239040 CDS
T07702
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04140
Autophagy - animal
gas04211
Longevity regulating pathway
gas05010
Alzheimer disease
gas05014
Amyotrophic lateral sclerosis
gas05016
Huntington disease
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123239040 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
123239040 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
123239040 (RB1CC1)
05014 Amyotrophic lateral sclerosis
123239040 (RB1CC1)
05016 Huntington disease
123239040 (RB1CC1)
05017 Spinocerebellar ataxia
123239040 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
123239040 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gas01009
]
123239040 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123239040 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
gas03029
]
123239040 (RB1CC1)
Protein phosphatases and associated proteins [BR:
gas01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123239040 (RB1CC1)
Membrane trafficking [BR:
gas04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123239040 (RB1CC1)
Mitochondrial biogenesis [BR:
gas03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123239040 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
123239040
NCBI-ProteinID:
XP_044522248
LinkDB
All DBs
Position
1:517743231..517807473
Genome browser
AA seq
1595 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVADLKHAIQNKYKIAIHQQVLVVNGGECMASDRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSAENDMELKVEESLMMPAVFHTVASRTQ
LAVEMHEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTFSYQKLLFKFESAYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSSPEHEGKEPENNETEKSS
ELVLYPDMPRMTNKSLLASCCKSVEHSALDNTDPENGKEIRESCQSTIQEEEVSVEPKES
DLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMNRLDPRFIQPFLADCRQTVAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLNNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADKEGEKLQALLRLVTEL
LERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAEKSKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRKFDGELPDISLTDLKFLQSFCPSEVQPLLRV
PLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSATTPRMEST
TGITTTTSPRTPPPLTIQDPLCPPVCPLEELSPDSIDAHTFDFETIPHPNIEQTLHQESL
DLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPQSPEMMVESLYSSVINAIDSRRMQD
TNICSKDDSGDHASLNVQMEKCKAVAQESHFNLQNIKEDLCHFRTLVQKEQCDFSNSLKC
TAVEIRNIIEKVKCSLEITLKEKHQKELQSLKHEYEAKLNALIKDSEENEKKIKKLKGDL
VGLEEVLQNKDNEFALVKNEKEAVLCLQNEKDQKLIELEHAMKNQNFEIKELKQSREVVL
EDLKKLHVENEEKLHLLRAELQSLEQSHLKELEDTLQDRHTQEFEKVLSDHKVSLEKLKK
ENQQKLDQIQESHTIVVQEKEQQLQELKFKVSDLSDLRCKLEVELALKEAETDEMKILLE
ESKAQQQETLKILIEKETENLRSEISMLNQKILDNNENYQIGLAELKTLMTVEKDQCISE
LVGRHEEESNLLRAELNKVTSLHQQAFEIETKLREQIVELQSKLELELSALEKQSNERLV
QQEEKYKAIIHKLEEDKEKIAMNQEQDRERLVQKLNCEKEEAVQVALKEFELQREAVEKE
LLEKIKHLESQITKSLPIEHTSEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQN
VRTSLIAEQQTNFNTVLTREKMKKENIINDLSDKLKNTMQQQERDKDLIESLSEDRARLL
EEKKKLEEEVNKLRSSSFVPPPFLATAPELCGACAPELPGETDRLASEIADEGRTDSAME
TSMMSVHENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIR
DFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGTSRRPWVLGKV
MEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttttggtcaacactggaactaccctaacatttgacactgaactt
gcagttcaaactgtggcagaccttaagcatgcaatccaaaacaaatataagattgcaatt
caccagcaggtactggtagtaaatggaggagaatgtatggcctcagatcgaagagtatgc
acttacagtgctgggacagacacaaatccaatttttctgtttaacaaagaaatgatatta
tgtgatcgtccgcctgctattcccaaaacaacattttcagcagaaaatgatatggaatta
aaagttgaagagtctcttatgatgccggcagttttccataccgtagcttcaaggacacag
cttgctgtggaaatgcatgaggttgccaagaaactctgttccttttgtgaaggtctagtc
catgatgaacatctacaacatcaaggctgggctgcaataatggccaatttagaggattgt
acattttcctaccaaaaactgcttttcaagtttgaaagtgcttattcaaattatctgcag
tccatagaagatatcaagctgaaacttacacatttaggaactgcggtttcagtaatggcc
aagattccacttttggagtgcctcacaagacatagctacagggaatgtttgggaagactt
gattcttctcctgaacatgaaggaaaagaaccagagaacaatgagactgaaaaatcatca
gaattggtgctttatcctgatatgcctcggatgactaacaaatcattgttagcctcatgt
tgcaagtcagtggaacattcagccctagacaacacagatcctgaaaatggcaaagaaatt
agggaatcttgtcagagcactatccaggaggaagaagtttcagtagaacctaaagaaagt
gacttgccttctttcaacgtttctttattagactggataaatgttcaagataggcctaat
gatgtggaatctttggtcagaaagtgctttgattctatgaatagacttgatccaaggttc
attcagccctttttggcagattgtcgacaaactgttgccaaactggataatcagaacatg
aaagccattaaaggacttgaagacaggctttatgcactggaccagatgatagctagctgc
agccgactggtaaatgaacaaaaagaacttgctcagggatttttagctaatcagaagaga
gctgaaaatttgaaagatacttccgtgctacctgatttgtgcctgagtcatgcaaatcag
ttgatgattatgttgaataatcatagaaaactgttggacattaaacagaaatgtaccact
gccaaacaagaacttgcaaataatctccaagtcagattgaagtggtgttgctttgttatg
cttcatgctgacaaagaaggtgagaagctacaagctttactccgccttgtaacagagctg
ctagaacgagtcaagattgtagaagctcttagtacagtaccacagatgtactgcttagct
gttgttgaagttgtaagaagaaaaatgttcataaaacactacagggagtgggctggtgct
ttaatcaatgatggaaaacatttatatgaagctgaaaagtcaaaaagggaatcttttgga
aaattgtttaggaaatcttttttaagaaatcgtctctttaggggtcttgactcctggcct
ccttccttttgtactcgaaagcctcggaaatttgatggtgaacttccagatatctcttta
actgatttgaagtttctgcagtctttctgcccttcagaagtacaaccgttactcagggtt
ccattactttgtgactttgaacctctacaccagcatgtactcgcactacataatttagtg
aaagcagcacaaagtttggatgaaatgtcacagaccattacagacctactgagtgaacaa
aaggcttccatgagtcaaacatccccacaatctgctactacaccaaggatggaaagtaca
acaggaattacaactactacctcacctagaactcctcctccactcactattcaggatcct
ttgtgtcctccagtgtgtccattagaagaattatctccagatagcattgatgctcataca
tttgattttgaaacaattcctcacccaaatatagaacaaacccttcaccaagaatcttta
gatttagactccttagctgaaagccctgaatctgattttatgtcagcagtgaatgaattt
gtaatagaagaaaatctaacatctcctaatcctataagtgatccacagagtccagaaatg
atggtggaatcactgtattcttcagttattaatgcaattgacagcagacgcatgcaggat
acaaatatatgtagtaaagatgattcaggagaccatgcttctctaaatgttcaaatggaa
aaatgcaaagctgttgcccaagaatcacatttcaatttacaaaacatcaaagaagacctc
tgtcacttcagaactcttgtgcaaaaagaacagtgtgatttctctaattctttaaaatgt
acagctgtagaaatccgaaatatcattgaaaaagtaaaatgttccctggaaataacacta
aaagaaaagcatcagaaagaactgcaatcgttaaaacatgagtatgaagctaaactcaat
gcattaataaaagatagtgaagaaaatgaaaaaaaaattaaaaaattaaaaggagattta
gtaggtcttgaagaggttttacaaaacaaagataatgagtttgctttggttaaaaatgaa
aaagaagctgtcctctgcctacaaaatgaaaaagatcaaaagctgatagagttagagcat
gctatgaagaaccaaaattttgaaattaaagaactgaagcagtcacgagaagttgtgttg
gaagacttgaaaaagcttcatgttgagaatgaagaaaaattacatcttcttagggcagag
cttcagagtttggagcagagtcacctgaaggaactagaagatactcttcaagataggcac
acacaggaatttgaaaaagttttgagtgaccacaaggtttctttagagaaattaaaaaag
gaaaatcaacaaaaacttgatcagattcaagaatcccatacaatagttgtccaagaaaag
gaacagcaattacaggagttaaaatttaaagtttctgatttgtctgacctgaggtgcaag
ttagaggttgaacttgctttgaaagaagcagaaactgatgaaatgaaaatattattggaa
gaaagcaaagcccaacagcaggaaaccttaaagatcctcattgaaaaagaaacagaaaac
ttgagatcagagataagcatgttaaatcagaagattctagataataatgagaactaccaa
ataggcctagcagagctgaaaacactaatgaccgttgaaaaagatcagtgcatttcagag
ttggtcggtagacatgaagaagaatcaaatttattgagagctgaactaaacaaagtaaca
tctttacatcaacaagcttttgaaattgaaactaaattgagagaacaaatagtggaattg
cagagtaagttggaattggaattgagtgctcttgaaaagcaaagcaatgaaagattggtc
caacaagaagaaaaatacaaagctattatccacaagcttgaagaagacaaagaaaaaata
gctatgaatcaagaacaagacagggaacgacttgttcagaagcttaattgtgaaaaagaa
gaagctgttcaagttgcccttaaagaatttgagttacagagagaagctgttgaaaaagaa
ctgttggaaaaaattaaacatcttgaaagtcaaataaccaaaagtcttcccattgagcat
actagtgaagattcatcaagtttagttgctgaacttcaggaaaaacttcaggaagaaaag
gccaagtttttagaacaacttgaagaacaagaaaaaagaaagaatgaagaaatgcaaaat
gttcgaacatctttgattgcagagcaacagactaattttaacactgttctaacaagagaa
aaaatgaagaaagaaaatataataaatgatcttagtgacaaattgaaaaatacaatgcaa
caacaggaacgagataaagatttaattgaatcactttctgaagatcgagcacgtttactt
gaagaaaagaaaaaacttgaagaagaagtaaataaattacgtagtagcagttttgttcct
ccaccatttttagctacagctcctgaactttgtggtgcttgtgcacctgaactccctggt
gaaacagacagattagcctcagaaatagcagatgaaggaagaacagattcagcaatggaa
acaagcatgatgtctgtacatgaaaatattcacatgttgtctgaagagaaacaaaggata
atgttgttagaaagaactttgcagttaaaagaagaagagaacaagcggttaaatcagaga
ctaatgtctcaaagcatgtcctcagtttcttcaaggcattcagaaaaaatagctattaga
gattttcaggttggagacttggttctcattatcttggatgaacggcatgacaattatgta
ttatttactgttagcccaactttatatttcctgcattcagagtctcttgctgcattggac
ctcaaaccaggtgagtgtgcttcaggtacatctagaagaccctgggtacttggaaaagta
atggaaaaggaatattgtcaagccaaaaaggcacaaaacagatttaaagttcctctgggt
accaaattttaccgagttaaagctgtgccgtggaacaagaaagtataa
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integrated database retrieval system
