Gracilinanus agilis (agile gracile opossum): 123239106
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Entry
123239106 CDS
T07702
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04140
Autophagy - animal
gas04148
Efferocytosis
gas05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123239106 (VPS11)
04148 Efferocytosis
123239106 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123239106 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123239106 (VPS11)
Membrane trafficking [BR:
gas04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123239106 (VPS11)
Hops complex
123239106 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR3_1st
TPR_GEMI5
zf-C3H2C3
zf-RING_5
Beta-prop_WDR36-Utp21_1st
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
Paralemmin
zf-C3HC4_3
DLP_helical
zf-RING-like
DUF1993
Motif
Other DBs
NCBI-GeneID:
123239106
NCBI-ProteinID:
XP_044522309
LinkDB
All DBs
Position
3:204100343..204113431
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AA seq
939 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKDSAGGDGTGPGPAPGSGASKPLSLPPGITVCDSGRGSLVFG
DMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKVWNLEKRD
GGNPLCTRIFPAIPGSEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQIL
HKGSYPVTGLAFRQAGKTTHLFVVTTENVQSYTLSGKDYPRIELDTHGCGLRCSALSDPS
QDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKISPKSEFTNRD
SQSSDKQILNIYDLCNKFIAYSSVFEDVVDVLAEWGSLYVLTRDGRVHVLQEKDTQTKLE
MLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEPSY
VIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSESEV
HFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKVQLEDIKNYQEALQYIGKLPFEQAE
SNMKRYGKILMHHVPEQTTQLLKVLCTDYRPCAEAAADVDGPGCRANSEEFIPIFANNPR
ELKAFLEHMTEVQADSSQGVYDTLLELRLQNWAHEKDSQVKEKLHGEALSLLKSGHFSSV
FDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQEPCLWEQ
ALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIKDYLVQKLQKQ
SQQIEKDELRVRRYREETTRIRQEIQELKTSPKIFQKTKCSICTSALELPSVHFLCGHSF
HQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKYSNDSFSVIADYF
GRGVFNKLTLLTDPPVGRVGTSLEAGLQRDLLMHSKRGT
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacttgcaatggcgccgcttcgttttttttgacaaggaactggtaaaggat
tctgcgggaggcgatgggaccggacctggacccgctcctggatcgggggcatctaagcct
ctcagtctcccgccaggcatcactgtctgcgattcaggccgggggagtttggtctttggg
gacatggaaggacagatctggttcctgcctcgctccctgcaactcacaggctttcaggca
tacaagctccgggtaacccacctatatcagctgaaacagcacaatatcctggcatctgtg
ggagaggatgaagaggggatcaatcctctggtgaaagtctggaatctggagaagagagat
ggtgggaatcccctctgcactcgaatcttccctgctattccagggtcagaaccaactgta
gtgtcctgtttgacagttcatgagaatctcaatttcatggctattggctttacagatggc
agtgttacccttaataaaggtgatatcacaagggaccggcatagcaagacccagattttg
cacaagggtagctatcctgtcactgggctggccttccgacaggcaggcaagactactcac
ttgtttgtggtgacaacagagaatgtgcagtcttatactctgtctggaaaggactaccct
cggatagagttagacacccatggctgtggcctgcgctgctcagccctaagtgatccttcc
caggacctgcagtttattgttgctggggatgagtgtgtttacttatatcagcctgatgag
cgtggcccttgctttgcctttgagggccataagctcattgcccactggttccgtggctac
cttgttattgtttcccgggaccgcaagatttcacccaagtcagagtttacgaacagggat
tcccagagctctgacaagcagatcctcaacatctatgatctttgcaacaagttcattgcc
tacagctctgtctttgaggatgtggtagatgtgctggctgagtggggctctttgtacgtg
ctgactcgggatgggagagtccatgtgcttcaggaaaaggacactcagactaaattggag
atgttgttcaaaaagaatctgtttgagatggcaatcaacttggccaaaagccagcacctg
gatagtgatggactggcacagattttcatgcagtatggggaccacctctacagcaaaggc
aaccatgatggtgctgtccagcagtacatccgaaccattgggaagctggagccatcctat
gtgatccgaaaattcttagatgctcagcgcatccacaaccttactgcctatctacaaacc
ctgcaccggcagtcactggccaatgctgaccataccaccctgttgcttaattgctacacg
aagctcaaggacagttccaagctagaggaattcataaagacaaagagtgaaagcgaagta
cactttgatgtagaaacagctatcaaggtccttcggcaggctggctactactcccatgcc
ctgtacttggctgagaaccatgctcatcatgagtggtacctgaaggtccagctagaggat
atcaagaactaccaggaagcattgcaatatattggaaagctgccctttgagcaagcagaa
agcaacatgaagcggtacggcaagattctcatgcatcatgtcccagaacaaaccacccag
ctgctgaaggtcctgtgtactgactatcggccctgtgcagaggctgctgctgatgttgat
gggcctggctgcagggccaattcagaggaattcattcctatttttgccaacaacccccgg
gaactgaaggccttcctagagcatatgactgaagtgcaggctgactcttcccagggtgtc
tatgatactctactagagctgagactacagaattgggctcatgagaaggactcacaggtt
aaggagaaactgcatggggaggcgctctctctcctgaagagtggccacttttccagtgtc
ttcgataaggccttggttctctgccagatgcatgatttccaagatggggtcctatacctg
tatgagcagggaaagctgttccagcaaatcatgcattaccacatgcagcatgaacaatat
cgacaagtgattgctgtctgtgaaaggcacggggagcaggagccctgtctatgggagcag
gctctcagctactttgccagaaaggaggaagactgcaaggaatatgttgctgctgtcctc
aaacacattgagagcaagaacctcatgccaccccttttagtggtgcagaccttggctcac
aattccacagctaccttgtctgtcatcaaagactatttggtacagaagcttcaaaaacag
agtcaacagattgagaaagatgaacttcgggttcgaaggtaccgggaagaaaccacccga
atccgacaggagatccaggagctgaagaccagcccaaagatcttccagaaaaccaagtgt
agtatatgtaccagtgccctggagctgccctctgtccacttcctgtgtggccattcattc
caccaacactgttttgagagctactcagaaagtgatgctgattgccccacctgcctccct
gagaaccgcaaagttatggatatgatccgggcccaggagcaaaagcgggatttgcacgat
caatttcagcatcagctcaagtactctaatgacagcttctctgttatcgctgattacttt
ggacgtggtgtcttcaacaagttgactctgctgactgatccaccagtgggcagagtaggc
actagcctggaggctggactgcagcgagacctgctcatgcactcaaagcggggtacctaa
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