Gracilinanus agilis (agile gracile opossum): 123239271
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Entry
123239271 CDS
T07702
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
123239271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gas04040
]
123239271
Ion channels [BR:
gas04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123239271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
123239271
NCBI-ProteinID:
XP_044522459
LinkDB
All DBs
Position
3:257641959..257752690
Genome browser
AA seq
1989 aa
AA seq
DB search
MATLPPPGPESFVFFTRQSLALIEQRISEGKSKEPKEEKTDEEEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDMDPYYMDKNTFIVLNKGKTIFRFSATPALYILTPFNLIRRISI
KILVHSLFSMLIMCTILTNCIFMTLSSPPDWTKNVEYTFTGIYTFESLVKILARGFCIGP
FTFLRDPWNWLDFIVICFAFLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTLFCLSVFALIGLQLFMGNLRHKCVRWPLEDKNITIENISVLCDLEDYK
SYFYHLEGQKDALLCGNGTDAGQCPEGYMCVKACTNPDYGYTSFDTFSWAFLALFRLMTQ
DFWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQATIEEARQKE
LEFQQMLDRLKKEQEEAEAIIAAADEYTSIGGGKVMGLSESSSETSKLSSKSAKERRNRR
KKKNQKKQSSGDEKRDNEKLSKSESDESIRRKSFHLGVEGHKLAREKRMSSPNQSPLSIR
GSLLSARRSSRTSLFSFRGRGKDLGSETEFADDEHSIFGDNESRRGSLFVPHRHRERRSS
NISQASRSPRMLPVNGKMHSAVDCNGVVSLVDGPTALMLPNGQLLPEVIIDKATSDDSGG
TTKIDPNKRRSSSFQISMDMLDDPTVRQRALSIASIITNTMEELEESRQKCPPWWYKFAN
TFLIWNCSPRWLKFKKFIHLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEGFKHMLTVG
NLVFTGIFTAEMVFKIIAMDPYEYFQVGWNIFDSVIVTLSLVELFLADVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKI
SSDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVYMMVMVIGNLVV
LNLFLALLLSSFSSDNLTAIEEDTDANNLQIAVVRIKKGINYTKKTIRELVQKAFVNKPK
ISNEIRKVDDHNIKKDNYISNRTLAEMSKDQHFHIDRDGTSGFGSSMERYMMEESDCQSY
INNPSLTVTVPIALGESDFENVNTEEFSSESDVEGSKERVHRSSSSEGSTIDNVIPEDRE
EAVAEPENSDEPEACFTDGCVRRFPCCQVSVESGKGKVWWNVRKTCYRIVEHNWFESFIV
LMILLSSGALAFEDIYIEQRKTIKTVLEYADKIFTYVFILEMLLKWVAYGYKVYFTNAWC
WLDFLIVDVSIITLVASTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIP
SIMNVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTNGERFPISVVETYEQCKQLMNSSHD
VRWKNVKVNFDNVGIGYLSLLQVATFKGWMIIMYAAVDSVNIDVQPRYEASLYMYLYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PGNKFQGCIFDIVTKQAFDITIMVLICLNMVTMMVEKDEQSETMTYVLYWINMVFIILFT
GECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGR
ILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEEGINDMF
NFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKVHPGSSVKGDCGNSSVGIFY
FVSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEY
SKLSDFAASLDPPLHIAKPNKVQLVAMDLPMVNGDRIHCLDILFAFTKRVLGESEEMDTL
RLQMEERFVAANPSKVSFEPITTTLKRKQEEVSATIIQRAFRRYRLRQNVKHISGIYNKG
DERVDLTTKEDMIFGKVNENSTPEKTDEVTPSTTSPPSYDSVTKRDKEKYEKDKAEKEDK
DKDGREGKK
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattgcctcccccaggacctgagagctttgtcttcttcaccagacagtctctt
gcactcattgaacaacgcatttctgaaggaaaatctaaggaacctaaagaggagaaaaca
gatgaagaagaagaaggcccaaagccaagtagtgacttggaagctggtaaacagcttcca
tttatttatggagatattcctccagggatggtgtcagagcccttggaagatatggaccca
tactacatggataaaaatacgttcatagtattgaataaagggaaaacaattttccgattc
agtgccacccctgccttgtatattttaacacctttcaacctgattagaagaatttctatt
aagattttggttcattctttattcagcatgctcatcatgtgtactatcctgactaattgt
atatttatgacattgagtagccctccagactggacaaagaatgttgagtacacttttacg
ggaatatatacttttgaatcactggtaaaaattcttgcaagaggcttctgtatagggcca
tttactttccttcgtgatccctggaattggcttgacttcattgtcatttgttttgcgttt
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaatcccaggcttaaagactattgttggagctctgatccag
tcagtcaagaagctttcagatgtcatgatcctgaccctgttttgtctcagtgtatttgct
ctcatcgggctacagctcttcatgggcaacctgagacataagtgtgtgcgctggccttta
gaagataaaaatatcacaatagaaaacataagtgttctttgtgacttggaagattacaaa
agctatttctatcatttggaaggacaaaaggatgctcttctttgtggtaatggcaccgat
gcaggccagtgtccagagggatatatgtgcgtgaaagcctgcaccaatccagattatggc
tacacaagctttgacactttcagttgggccttcttggccttatttcgtttaatgactcaa
gatttctgggaaaatctttaccaacagaccttacgtgctgctgggaagacttacatgata
ttttttgttgtggtgattttcttgggctcattttatctgataaacttgattttggctgta
gttgccatggcctatgaagaacagaatcaggcaactatcgaagaagcccggcaaaaagag
ttggaatttcagcagatgttagaccgacttaaaaaagaacaagaggaggcagaggcaata
atagcagcagcagacgagtatacaagtattggtggaggcaaagttatgggactttcagaa
agttcttctgaaacatccaaattaagctcaaagagtgctaaagaaagacgtaatcgaagg
aagaaaaagaatcagaaaaaacagtccagtggggatgaaaagagagacaatgaaaaatta
tctaaatctgaatccgatgagagtatcaggagaaaaagtttccacctgggtgttgaagga
cataaactagctcgagaaaagaggatgtcttctcccaatcagtccccccttagcatccgt
ggctccttactttctgcaagacgcagcagtagaaccagtctttttagcttcaggggtcga
ggaaaggatcttggatccgagactgaatttgctgatgacgagcacagtatttttggagac
aatgaaagcagaagaggttctttgtttgtgccacacaggcacagagagcgacggagtagt
aacatcagccaagccagtaggtctcctcggatgctcccagtaaatggcaagatgcacagt
gctgtcgactgcaatggtgtggtgtccctggtcgatggtcctacagccctcatgctgcct
aatggacagcttttgccagaggtgataatagataaggcaacttctgatgacagtggtgga
acaactaaaatagatcctaataaaagaagatcaagttctttccaaatttctatggatatg
ctggatgatcccactgtcagacaaagagcactgagcatagccagcataataacaaataca
atggaagaacttgaggaatccagacagaaatgcccaccttggtggtataaatttgctaat
acttttctcatttggaattgctcaccacgttggctaaaattcaaaaagtttatacattta
attgtgatggatccatttgttgaccttgccattactatttgcatagttttaaatactcta
tttatggccatggaacattacccaatgactgaaggatttaaacatatgcttactgtggga
aatctggtcttcactgggattttcactgcagaaatggtttttaaaataattgccatggat
ccatatgagtatttccaagttggttggaacatttttgacagtgtcattgtaacccttagt
ttagtggagcttttcctagctgatgtggaaggattgtctgtacttcgttcatttagattg
ctacgagttttcaagttggcaaaatcttggccaacactgaacatgctgataaagatcatt
ggcaactcagtgggggctctgggaaacctgaccttggtgttggccatcattgtctttatt
tttgctgtggtcggcatgcagctttttggcaagagctacaaagaatgtgtctgcaagatc
tctagtgattgcgaacttccacgttggcacatgaatgacttttttcactccttcctaatt
gtatttcgagtgctgtgtggagaatggatagagaccatgtgggactgtatggaggtggca
ggtcaatccatgtgcctcattgtttacatgatggtcatggtgattgggaaccttgtggta
ctgaacctttttctggctttgttattgagttcatttagttcagataatcttacagcaatt
gaagaagatacagatgcaaataatcttcagatcgcagtggtgagaattaaaaagggaata
aattacactaaaaaaactatccgtgagcttgttcaaaaggcatttgttaacaaaccaaag
atttcaaatgagatccgaaaagtggatgatcataatattaaaaaggataattacatatcc
aatcgtacgcttgctgaaatgagcaaagatcaacatttccacatagatcgagatgggacc
agtggttttgggagcagcatggaaagatacatgatggaggagagtgactgccaatcttat
attaacaatcccagcctcacagtcacagtaccaattgcactgggagaatctgattttgaa
aatgtaaatactgaagaatttagcagcgaatcagatgttgagggcagcaaggagcgagta
caccgatctagctcctctgaaggcagtacaattgataatgttatccctgaggacagagaa
gaagcagtggctgaacctgaaaattcagatgagccggaggcctgttttactgatggttgt
gtacgaaggttcccctgctgtcaagtcagcgtagaatctggcaaaggaaaagtttggtgg
aacgtaagaaaaacctgctatcgaatagtagaacacaattggtttgagagtttcattgtt
ctcatgatccttctcagcagtggtgctttggcttttgaagatatatacattgaacagaga
aaaaccattaagactgtattggaatatgctgacaagatattcacttatgtcttcattctg
gaaatgctgctaaaatgggtagcatatggatataaagtatatttcacaaatgcctggtgc
tggctggacttcttgattgttgatgtatctataattacacttgtagccagtacccttgga
tattcagacctcggtcctattaaatcccttcggacactaagagctttaagaccactcaga
gctttatctcgatttgaaggaatgagggtagtggtgaatgctcttttaggagcaattcca
tccattatgaatgtactactggtctgcctcatattctggctaatttttagcattatggga
gtaaatttgtttgctggcaagttctatgagtgcgttaacaccacaaatggcgagaggttt
cctatatccgtggtggaaacatatgagcagtgtaaacaactcatgaacagtagccatgat
gtacggtggaaaaatgtgaaagtgaactttgataatgttggaatcggttacctttctttg
cttcaagttgccacatttaaaggatggatgattatcatgtatgctgctgttgattcagtt
aatatagatgttcagcccaggtatgaagcaagcctctacatgtatctttactttgtcatc
tttatcatctttggatcattcttcactttgaatctcttcattggtgtcatcatagataat
ttcaatcaacagaaaaaaaagcttggaggccaagatatctttatgacagaggagcagaag
aaatactacaatgcaatgaaaaagttggggtccaagaaaccacaaaagccaatacctaga
ccagggaacaaattccaaggatgtatatttgatatagtgacaaaacaagcttttgatatt
acaatcatggtacttatatgtcttaacatggtgactatgatggtagaaaaagatgaacaa
agtgaaaccatgacctatgttttatattggataaatatggtttttattatcttattcact
ggagaatgtgtgctgaagctgatctccctccgccattattacttcactattggatggaac
atttttgattttgtggtggtcattctatccattgtaggtatgtttttagctgacttaata
gaaaaatattttgtgtctcctaccctttttcgtgtgatccggcttgccaggattggccga
atacttcgtcttattaaaggggcaaaagggattcgtacactgctttttgctttgatgatg
tccctccctgctctatttaacattgggctcttgctgtttttggtcatgtttatctatgcc
atctttggaatgtccaattttgcctatgttaaaaaggaagaaggaattaatgacatgttc
aactttgaaacttttggcaatagcatgatctgcctcttccagattaccacatcagctggt
tgggatggtttgctcgcacccattcttaacagtggacccccagactgcgaccctgaaaaa
gttcatcctggaagctctgtcaaaggagattgtggcaattcttctgttggtattttctac
tttgtcagttatatcatcatctctttcttggtggttgtaaacatgtacattgctgttatc
ctggagaacttcagtgttgctactgaagaaagtacagagcctttgagtgaggatgacttt
gagatgttctatgaggtctgggaaaagtttgatcctgatgccacccagttcatcgaatac
agtaaactctctgattttgcagcttcattagatcctcctcttcatatagcaaaacctaat
aaagtccagcttgttgccatggatctacccatggtaaatggggaccgaattcactgccta
gatatcttatttgctttcacaaaacgagtgttgggtgaaagtgaagagatggacaccctt
cgtttacagatggaagagaggtttgtggctgcaaatccttctaaagtttcttttgaaccc
attacgactactcttaaacgaaaacaagaggaagtgtctgctactataattcagcgagca
tttagacgttaccgcttaagacaaaatgtcaagcatatatcgggcatatataacaaaggg
gatgaaagagttgatctcactacgaaagaagatatgatctttggtaaagttaatgaaaac
tcaactccagagaaaacagatgaggtgaccccttctaccacctctccaccttcttatgat
agtgtgacaaagcgggacaaagaaaaatatgaaaaggataaagcagaaaaggaagacaaa
gacaaagatggcagagaaggcaaaaagtaa
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integrated database retrieval system
