Gracilinanus agilis (agile gracile opossum): 123239347
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Entry
123239347 CDS
T07702
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123239347 (DDX18)
03009 Ribosome biogenesis [BR:
gas03009
]
123239347 (DDX18)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123239347 (DDX18)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123239347 (DDX18)
Ribosome biogenesis [BR:
gas03009
]
Eukaryotic type
90S particles
Helicases
123239347 (DDX18)
Pre-60S particles
123239347 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
123239347
NCBI-ProteinID:
XP_044522557
LinkDB
All DBs
Position
3:305896531..305922464
Genome browser
AA seq
643 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNEKLRQRNQRLKLKEALKANIPEVQDEHVSQEAEEEIKVEKSPK
KSTVLVASEESAAQLPNSELKKKKKKKKRKITTDAEPENKKAKTEDHQKGSDDEVAKDPK
VKENTVEDQEEDIEMPSLPHGLTGSFEDTSFTSLANIVNENTLKAIAEMGFTNMTEIQHK
SIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKLKFMPRNGTGVLILSPTRELAMQTF
GVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLLDHMQNTPGFMFKNLQ
CLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYVGV
DDDKDTATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYI
DLPVMAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKE
YIHRVGRTARGINGRGHALLILRPEELGFLRYLKQAKVPLSEFEFSWSKISDIQAQLEKL
IEKNYFLHKSAQEAYKSYVRAYDSHSLKQIYNVNSLNLPLVALSFGFKVPPFVDLNLNSS
QGKRLQKRGGGGGFGYQKPKNVHKSKIFKHISKKKSDGRQFSH
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacctaccgatgaagttattgcgcaagaagatcgagaagcgcaatgagaagcta
cgtcagaggaaccagcggctgaagctgaaagaggccttaaaagccaatataccagaagtc
caagatgaacatgtgtcacaagaagcagaagaagaaataaaagtagaaaaatctcccaaa
aaatctacagtattagtagccagtgaagaatcagctgcacagctccctaattctgaattg
aaaaagaagaagaagaagaagaagaggaaaataacaactgatgcggagcctgaaaacaaa
aaagcaaaaaccgaagatcaccaaaaaggatctgatgatgaagttgcaaaagatcccaaa
gtaaaagaaaacactgtagaagatcaggaagaagatattgaaatgcctagtcttcctcat
ggcctaacaggatcctttgaggatacttcattcacttcacttgctaatatagtcaatgaa
aacactctgaaggcaatagcagaaatgggctttactaacatgactgagattcaacataaa
agtatcagaccacttctagaaggcagggatatcctagcagctgcaaaaacgggcagtggc
aaaaccctagcattcctcatcccttcaatagagctcattgttaagttaaagttcatgcct
aggaatggaacaggagtccttatcctctcacctactcgagagctggctatgcagaccttt
ggtgtgcttaaggaactgatgactcaccatgtgcatacctatggtttgatcatgggaggt
agtaacaggtctgcagaggcgcaaaaacttgcaaatgggatcaacattattgtggcaaca
cctggccgacttctggaccatatgcagaataccccaggatttatgtttaaaaacctgcaa
tgtcttgttattgatgaggctgaccgaattcttgaggttgggtttgaggaagaaatgaag
cagatcatcaaacttttgccaaaacgcagacaaacaatgctcttttctgccacacaaact
cgtaaggtagaagatctggcaaagatttcccttaaaaaggaaccattatatgttggtgtt
gatgatgataaagatactgcaacagtagatggtctcgaacagggatatgttgtttgtcca
tctgagaaaagattccttctactctttacattcctcaagaagaaccggaagaagaaactg
atggtatttttttcttcatgtatgtcagtgaaataccactatgagcttctaaactacatt
gatttacctgtcatggccattcatggcaagcagaagcaaaataagcggacaactacattc
tttcagttctgcaatgcagattctggaattttgctgtgtacagatgtggctgccagaggg
ctagatattcctgaagtagattggattgtccagtatgaccctccagatgatccaaaggaa
tatattcatcgtgtaggtagaacagccagaggcataaacggaagaggtcatgctttactt
attttacggccagaagagttgggttttcttcgttacctgaagcaagccaaggtaccatta
agtgaatttgaattttcctggtcaaaaatttctgacattcaggctcagctggaaaaactg
attgagaagaactacttccttcataaatcagcacaggaggcatataaatcctatgttcga
gcatatgattcccattctctgaagcaaatctataatgttaacagcttaaatttacctcta
gttgctttatcatttggtttcaaagtgcctccatttgttgacctgaatctgaacagcagc
caagggaagagactgcaaaaaagaggtggtggtggtggttttggctaccagaagcccaag
aatgtccacaagtctaaaatttttaagcacattagcaaaaagaaatctgatggcaggcaa
ttctctcactaa
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