KEGG   Gracilinanus agilis (agile gracile opossum): 123239384
Entry
123239384         CDS       T07702                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas03020  RNA polymerase
gas03420  Nucleotide excision repair
gas05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123239384 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123239384 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    123239384 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gas03021]
    123239384 (POLR2D)
   03400 DNA repair and recombination proteins [BR:gas03400]
    123239384 (POLR2D)
Transcription machinery [BR:gas03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123239384 (POLR2D)
DNA repair and recombination proteins [BR:gas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123239384 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom BIG2_C
Other DBs
NCBI-GeneID: 123239384
NCBI-ProteinID: XP_044522588
LinkDB
Position
3:complement(319441760..319446521)
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggaggcagcgaccctcgcgctggcgatgtggaggaagacgcctcgcagctc
gtctttcccaaagaatttgaaacagcagaaactcttctaaattcagaggtccacatgctt
ctagagcatcggaagcaacagaatgaaagtgcggaggatgaacaagaactttcagaggtt
ttcatgaaaactttaaattacactgcacgttttagtcgttttaaaaacagggaaaccatt
gctagtgttcggagtttgttactccagaaaaagctccataaatttgagttggcttgttta
gcgaacctttgtcctgagacagcagaggaggctaaggctctgattccaagcctagagggt
cgatttgaagatgaagaattgcaacagatcctagatgatattcagaccaagaggagcttc
cagtattaa

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