Gracilinanus agilis (agile gracile opossum): 123239541
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Entry
123239541 CDS
T07702
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gas04990
]
123239541 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
gas04990
]
Other domain-containing proteins
Patched domain-containing proteins
123239541 (PTCHD1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
123239541
NCBI-ProteinID:
XP_044522752
LinkDB
All DBs
Position
3:379513011..379572028
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AA seq
888 aa
AA seq
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MLRQVLHRGLRTSFSRLGHFIASHPVFFASAPVLISILLGASFSRYQIEESVEHLLAPKH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIITSFQQENMLDQHHTDLILKLHS
AVTRMQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKTARATNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDQVKSAQAVQLTYYLQTINSLNDMVAERWESNFCDTVKLF
QKSNGKIKMYPYTSSTLREDFQKTSRVSERYLITSLVLMVTVAVLCCSMQDCVRSKPWLG
LLGLVTVSLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSLFCRKVPKPEVLQEKPAWYRFLLTARFSEDTADAEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVREGSDLSNIVATATRTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLKKLNV
STGLPKKNFTDMLRNSFLKAPQFSHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVFMDRYSSSLGAPLQNSCISALFLLFFSAFLVAD
SLINVWITLTVASVEFGVIGFMTLWKVELDCISMLCLIYGINHTVDNCAPLLSTFVLGKD
FTRTKWVKNALEIHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacagaggcttgaggacgtctttctcccggctcggccacttc
attgccagtcaccccgtcttcttcgcctccgcccccgtgctcatctccatcctcctgggg
gccagcttcagccgctaccagatagaggagagcgtggaacacctgctggcgcccaagcac
agcctggccaagatcgagaggaatctagtcaacagtctcttcccggtgaaccgctccaag
caccggctctattcggacctgcagactcccgggcgttacggccgggttatcatcacctcc
ttccaacaggagaacatgctggaccagcaccacactgacctgatcttaaagttgcactct
gctgtgaccaggatgcaagtacaaaggcctggttttaattatacattcgctcatatatgt
atcctgaataatgataagacttgcatagtggatgacatagtgcacgtcctggaggaatta
aagactgctcgtgccacaaaccggaccaattttgcaatcacatatccaatcactcactta
aaagatgggagggaagtatataatggacaccagctgggtggtgtcaccgtgcacagcaaa
gatcaggttaaatccgcacaagccgtccagctcacctattatctgcaaacaatcaactct
ttaaacgacatggtggcagagaggtgggagtccaacttttgtgacacagtcaaacttttc
cagaagtctaatgggaaaatcaaaatgtacccttacacatcctcgacactgagggaagac
tttcagaagaccagccgcgtatctgaacgttacctgatcacgagcctggtcctaatggtc
actgtggctgtcctctgttgctccatgcaggactgtgtccgcagcaaaccctggctgggc
ctccttggattggtcacagtaagcctggccacactaactgcagccggaatcattaatctg
actggtgggaaatataattccaccttcctgggagtccccttcgtcatgctaggtcatgga
ttatacgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtt
aaagagagaactgcagctgtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttgggatcggtgccagccctttcactaacattgaagcagccaga
attttctgctgtaattcctgtattgcaatcttcttcaactacctctatgtactctcattt
tatggttccagcctggtgtttactggatacatagaaaacaattaccagcatagtctcttc
tgcagaaaagtcccaaagccagaggtgttgcaagagaagcctgcatggtacaggtttctt
ctaacggccagattcagtgaggatacggcggacgcagaggaagcaaatacatatgaaagt
cacctgttggtatgtttcctcaaacgctattactgtgactggataaccaacacttatgtt
aagccttttgtagtgctcttttaccttatttatatttcctttgccttaatgggctacctg
caggtcagggaagggtcagaccttagtaacatcgtagcgacggcaacaagaaccattgag
tacactactgcccagcaaaagtattttagtaactacagtccagtgattggcttttatatc
tacgagtcgatagaatactggaatacaagtgtccaagaagatgtgctagagtataccaag
gggtttgtgaggatatcatggtttgaaagttacttgaattatcttaagaaactcaatgtg
tctactggcttgcccaagaaaaattttacagacatgttgagaaactccttcctgaaagcc
ccccagttctcacatttttcggaggacatcatcttctccaaaaagtacaacaatgaggtt
gatgtcgtggcttccaggatgttcctggtagccaagaccatggaaaccaacagagaagag
ctctatgatctcctagagaccctaagaagactttctgtcacctccaaggtgaagttcata
gtgttcaatccatcctttgtgtttatggatcgatattcttcctctctgggagctcccctg
cagaactcctgcattagtgctttatttctgctcttcttctctgcgttcctagtggcagac
tcccttattaatgtttggataaccctaacggtcgcctcagttgagtttggagtgataggc
ttcatgacattgtggaaagtagaactggactgcatttctatgctgtgcttaatatatgga
attaaccacacagttgacaactgtgctccactattatcaacatttgtcctgggcaaggat
ttcacaagaactaaatgggtaaaaaatgccctggaaatacatggggtagctattttacag
agttacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttatttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctaccaccctctaagaaaaaaaggaaagagaagaaa
aatcccgaaaatcgggaggaaattgagtgtgtcgaaatggtggatatggatagtacccga
gtggttgaccaaattacaacagtctga
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