Gracilinanus agilis (agile gracile opossum): 123240107
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Entry
123240107 CDS
T07702
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123240107 (KDM1B)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
123240107 (KDM1B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
Pyr_redox_2
Pyr_redox
DAO
HI0933_like
FAD_binding_3
FAD_oxidored
Pyr_redox_3
FAD_binding_2
Lycopene_cycl
GIDA
NAD_binding_9
2-Hacid_dh_C
NAD_binding_7
KARI_N
Attractin
AlaDh_PNT_C
Motif
Other DBs
NCBI-GeneID:
123240107
NCBI-ProteinID:
XP_044523438
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Position
1:complement(598087370..598141532)
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AA seq
825 aa
AA seq
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MSTLRARAKKKAASFDQPTDSLPLRSSGRQVKKKVTEVAADDDDDTSCEKKYRKCEKAGC
TATCPVCFSSAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKFAAWKRIWT
SNGKCEPSPKAFMADQQLPYWVQCTKPDCGKWRQLTKEIQLTSQMAQAYRCGTKPNATVK
TEGSDQCSQPEDLRVAEVSNQWWYSMLILPPFLKDSVAAPLLSAYYPDCVGMSPSCTSTN
RDPSQASQASPEKAEHCKAVPGVFGSGMNQYFQPFYQPNECGKALCVRPDVMELDELYEF
PEYSRDPTMYLALRNLILALWYSNCKEALTPQKCTHHIIVRGLVRIRCVQEAERILYFMT
RKGLINTGALSVSPDHLLLPKDYHNKSVIVVGAGPSGLAAARQLHNFGIKVIVLEAKDRI
GGRVWDDKSFKGVTVGRGAQIVNGCINNPIALMCEQLGIQMHKLGERCDLIQESGRITDP
TIDKRMDFHFNAILDVVSEWRKDKTQLQDVPLGEKIQEIYKAFIQESGIQFNELEEQVLQ
FHLSNLEYACGSDLNQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLKFP
VRTIDYSGEEVQVTTMDGSVWTAQKVLVTIPLSLLQKGAIQFNPPLPEKKIKAINSLGAG
IIEKIALEFPYRFWDNKIQGADFFGHVPPSSNKRGLFAVFYDMDPQGKYSVLMSVITGEA
VASIKNLDDKQVLQQCMATLRELFKEQEIPDPVNFFVTRWNTEPWIQMAYSFVKTGGSGE
AYDILAEDIQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccctcagggctcgagcaaagaaaaaggcagcttcatttgaccagcctacagat
agtcttcctttgaggagttccgggaggcaggtgaagaaaaaggtaacagaagtggcagca
gatgatgatgatgatacctcatgtgaaaagaagtacaggaaatgtgaaaaggctgggtgt
acagcaacttgtccagtttgcttctcaagcgctgctgaaaggtgtgcaaaaaatgggtat
acatctcgatggtatcatctatcctgtggagaacatttttgcaatgaatgttttgaccat
tattaccggagtcacaaagatggttatgaaaaatttgctgcttggaaaagaatatggact
agtaatgggaaatgtgagcccagtcccaaagcttttatggctgatcaacagcttccatat
tgggttcagtgcacaaaacctgactgtgggaaatggagacaacttacaaaggaaattcag
cttacatcgcaaatggcacaggcgtatcgctgtggtaccaaaccaaatgccacagttaag
acagagggctcagaccagtgttcccaaccagaagatctaagagtagctgaggtgtctaat
cagtggtggtattccatgcttatccttcctccctttctgaaagatagcgtggctgcccct
ttattatctgcctattatcctgactgtgtgggcatgagcccctcctgcaccagcaccaac
cgcgaccccagtcaagccagtcaagccagtcctgagaaagcagagcattgcaaggctgta
ccaggtgtgtttggttctgggatgaaccagtacttccaacctttctaccagcccaatgaa
tgtggaaaagctctatgtgtgaggccagatgtgatggaactggatgaactctatgagttc
ccagaatactcacgcgaccccaccatgtatttggctttgagaaacctcatccttgctctg
tggtattctaattgcaaagaagcacttacccctcagaaatgcactcatcatatcatcgtt
cgaggccttgtgcgcattagatgtgttcaggaggcagagaggatactttattttatgaca
agaaaaggtctgatcaatactggggcgttgtctgtcagccctgatcatcttcttctccca
aaagactaccacaataaatcagttatcgttgtcggggctggtccatctggattagcagct
gctaggcaattgcacaactttggaattaaggtgatcgtcctagaagccaaagacaggatt
ggtggacgagtctgggatgacaaatcctttaaaggagtcacagttggaagaggagctcag
attgtcaatggctgtataaacaaccctatagccctaatgtgtgagcaacttggcatccaa
atgcacaaacttggagaaagatgtgacttgatccaggaaagtggaagaataactgatccc
actattgataaacgcatggacttccactttaatgccatcttggatgttgtttctgagtgg
aggaaagataagactcaactccaagatgttcccctaggagaaaagatccaggaaatctac
aaggcctttattcaggaatctggcatccagttcaacgagctagaggaacaagtgcttcag
ttccatctcagcaacttggaatatgcctgtggcagcgacctaaatcaggtatctgcccgc
tcgtgggatcacaatgaattctttgctcagtttgctggtgatcacactcttctgactcca
gggtattctgtaataattgagaagctagctgaaggactggacattcgacttaaatttcca
gttcgaaccattgactattctggggaagaagtccaagtcactaccatggatggctcagta
tggacagcacaaaaggtcttagtcactatacctttgtccttactccagaaaggtgccatt
cagtttaatccaccattgccagagaagaaaataaaagccatcaacagtttaggagccgga
atcattgaaaagattgccttggaatttccttatagattttgggataataagattcaagga
gctgatttttttggccatgttcctcctagttccaacaagcgtggactctttgctgtattt
tatgatatggatcctcagggtaaatacagtgttttgatgtcagtcattaccggagaggct
gtagcatctattaagaacctggatgacaagcaggttctacaacagtgcatggccacactc
cgggaactattcaaagagcaggaaatcccagacccagtaaacttctttgttactcgatgg
aacacagagccatggatccaaatggcatatagttttgtaaagacaggtggaagtggagaa
gcttatgacatccttgcagaagacatacaagggactatcttttttgctggtgaggcaaca
aataggcactttccacaaacagtcacaggagcatacttgagtggtgtacgagaagcaagc
aagatagcagcattttaa
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